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The map label for this gene is hofQ [C]

Identifier: 161524905

GI number: 161524905

Start: 1913640

End: 1914971

Strand: Reverse

Name: hofQ [C]

Synonym: Bmul_1732

Alternate gene names: 161524905

Gene position: 1914971-1913640 (Counterclockwise)

Preceding gene: 161524906

Following gene: 161524904

Centisome position: 55.53

GC content: 64.71

Gene sequence:

>1332_bases
ATGAAAAACACACTGATTGCATTTGCGATTGCCATCTGCACCATGACATTCGCGTCGCTCGCGAGCGCGAGCGGCACGAT
CGAACTCGCGGTCGGCGCGCAGCGGCAGATTTCGGCCGGCCGTCCGCTGCAGCGGGTTGCGGTCGGCGATCCGGCTATCG
CCGATGTGCTGATCATGAAGGGCAGTCGTTCCAGCTCGGTGCTGCTGATCGCCAAAGCGCCCGGTGCGACGAACGTGATG
CTGTGGGAGCGTGGTCGCGACGAGCCGACGGTCTGGAGCGTCGAGGTCGTCGACGCGGCCGCGCACGCGGTCCTCGACGA
TTCCGCGCCGCGCGTGAATGCATACGGAGGAACGGCGGTACTGCGCGGGACGTCGGCATCGCTCGATGCACACGAGCGTG
CAGTTGCAGTCGGCAAGAACATGGCCGGGAAAGGCGCAGTGATCGACCGCTCCACGCTCGCCGGCAAGAGCGTCGTACAA
GTCGACGTGCGCGTCGTCGAATTCAGCCGCTCGGTGCTCAAGCAGGTCGGCTTCAACTTCTTCAAGCAGAGCAACGGGTT
CTCGTTCGGCTCGTTTTTGCCGAGCGGTGTGCAGTCGTTCGGCGGCGGATCCGGCCCCGGCAGTGCGGGGTACATCCCCA
CGCTCGGCTCGCCTGTTGCATCCGCATTTAACCTGGTCGTGAACGCGGCGGGGCGCGGCATCTTCGGCGATTTGTCGCTG
CTCGAAGCGAACAATCTCGCACGCGTGCTTGCCGAGCCGACGCTCGTCGCGCTGTCGGGCCAAAGCGCGAGCTTCCTCGC
CGGCGGCGAGATTCCGGTGCCGTCGCCGCAAGGGCTCGGTTCGACCGCAATTCAGTGGAAGCAATACGGCGTTGGACTTT
CGCTGACCCCGACGGTATTGAGCCCGCAGCGAATTGCGCTGAAGGTCGCGCCGGAGTCGAGCCAGCTCGATTTCGTGAAC
AGCGTGACGATCAGCGGTGTCGCCGTACCGGGGATCACGACCCGCCGCGCCGATACGACGGTCGAACTCGGCGACGGCGA
GAGCTTCGTGATCGGCGGCCTGATCGACCGCCAGACGATGTCGAACGTCAGCAAGGTACCGCTGCTCGGCGACCTGCCGA
TCATCGGCACGTTCTTCAAGAATCTGAACTACCAGCAGAACGACAAGGAATTGCTGATCATCGTGACGCCGCATCTCGTG
GCGCCGATCGCCAAGGGCGCGGCATTGCCGGCAACGCCTGGCGAACTGTCGGAGCAGCGTGACGGGCCGGTCTGGCGATC
GTATCTGGGTGGTGTGGCGTCGCCCGACGCCGCGCCGGGATTTTCGAAATGA

Upstream 100 bases:

>100_bases
ATCCGCGGCGGTCGGTCGGAAACGATTGCGTACTGAAACAGATCGATGGCCATCGATATCAGCGACGACAAGTAAAGGCC
GTGCGACGGTCTACCACACA

Downstream 100 bases:

>100_bases
ATGCGAAGCAGCGGCGCACCGCTACGCCTTGCGTAATCGGGGGTGTTCGACATGAATGCACGAACCCAATCATTGTGTGA
ACCCGCCGTGACCGACTATT

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKNTLIAFAIAICTMTFASLASASGTIELAVGAQRQISAGRPLQRVAVGDPAIADVLIMKGSRSSSVLLIAKAPGATNVM
LWERGRDEPTVWSVEVVDAAAHAVLDDSAPRVNAYGGTAVLRGTSASLDAHERAVAVGKNMAGKGAVIDRSTLAGKSVVQ
VDVRVVEFSRSVLKQVGFNFFKQSNGFSFGSFLPSGVQSFGGGSGPGSAGYIPTLGSPVASAFNLVVNAAGRGIFGDLSL
LEANNLARVLAEPTLVALSGQSASFLAGGEIPVPSPQGLGSTAIQWKQYGVGLSLTPTVLSPQRIALKVAPESSQLDFVN
SVTISGVAVPGITTRRADTTVELGDGESFVIGGLIDRQTMSNVSKVPLLGDLPIIGTFFKNLNYQQNDKELLIIVTPHLV
APIAKGAALPATPGELSEQRDGPVWRSYLGGVASPDAAPGFSK

Sequences:

>Translated_443_residues
MKNTLIAFAIAICTMTFASLASASGTIELAVGAQRQISAGRPLQRVAVGDPAIADVLIMKGSRSSSVLLIAKAPGATNVM
LWERGRDEPTVWSVEVVDAAAHAVLDDSAPRVNAYGGTAVLRGTSASLDAHERAVAVGKNMAGKGAVIDRSTLAGKSVVQ
VDVRVVEFSRSVLKQVGFNFFKQSNGFSFGSFLPSGVQSFGGGSGPGSAGYIPTLGSPVASAFNLVVNAAGRGIFGDLSL
LEANNLARVLAEPTLVALSGQSASFLAGGEIPVPSPQGLGSTAIQWKQYGVGLSLTPTVLSPQRIALKVAPESSQLDFVN
SVTISGVAVPGITTRRADTTVELGDGESFVIGGLIDRQTMSNVSKVPLLGDLPIIGTFFKNLNYQQNDKELLIIVTPHLV
APIAKGAALPATPGELSEQRDGPVWRSYLGGVASPDAAPGFSK
>Mature_443_residues
MKNTLIAFAIAICTMTFASLASASGTIELAVGAQRQISAGRPLQRVAVGDPAIADVLIMKGSRSSSVLLIAKAPGATNVM
LWERGRDEPTVWSVEVVDAAAHAVLDDSAPRVNAYGGTAVLRGTSASLDAHERAVAVGKNMAGKGAVIDRSTLAGKSVVQ
VDVRVVEFSRSVLKQVGFNFFKQSNGFSFGSFLPSGVQSFGGGSGPGSAGYIPTLGSPVASAFNLVVNAAGRGIFGDLSL
LEANNLARVLAEPTLVALSGQSASFLAGGEIPVPSPQGLGSTAIQWKQYGVGLSLTPTVLSPQRIALKVAPESSQLDFVN
SVTISGVAVPGITTRRADTTVELGDGESFVIGGLIDRQTMSNVSKVPLLGDLPIIGTFFKNLNYQQNDKELLIIVTPHLV
APIAKGAALPATPGELSEQRDGPVWRSYLGGVASPDAAPGFSK

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=212, Percent_Identity=32.5471698113208, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082242, Length=168, Percent_Identity=31.547619047619, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 45635; Mature: 45635

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTLIAFAIAICTMTFASLASASGTIELAVGAQRQISAGRPLQRVAVGDPAIADVLIMK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCEEEEECCCCHHEEEEEEE
GSRSSSVLLIAKAPGATNVMLWERGRDEPTVWSVEVVDAAAHAVLDDSAPRVNAYGGTAV
CCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCEEECCCCEEE
LRGTSASLDAHERAVAVGKNMAGKGAVIDRSTLAGKSVVQVDVRVVEFSRSVLKQVGFNF
EECCCCCCCHHHHHHHHCCCCCCCCCEEECHHCCCCEEEEEEHHHHHHHHHHHHHHCHHH
FKQSNGFSFGSFLPSGVQSFGGGSGPGSAGYIPTLGSPVASAFNLVVNAAGRGIFGDLSL
HHCCCCCCHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEE
LEANNLARVLAEPTLVALSGQSASFLAGGEIPVPSPQGLGSTAIQWKQYGVGLSLTPTVL
ECCCCHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHEEHHHHCCCEEECCCCC
SPQRIALKVAPESSQLDFVNSVTISGVAVPGITTRRADTTVELGDGESFVIGGLIDRQTM
CCCEEEEEECCCCCCCEEEEEEEECEEEECCCEECCCCCEEEECCCCEEEEECEECHHHH
SNVSKVPLLGDLPIIGTFFKNLNYQQNDKELLIIVTPHLVAPIAKGAALPATPGELSEQR
HHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCHHHCC
DGPVWRSYLGGVASPDAAPGFSK
CCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNTLIAFAIAICTMTFASLASASGTIELAVGAQRQISAGRPLQRVAVGDPAIADVLIMK
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCEEEEECCCCHHEEEEEEE
GSRSSSVLLIAKAPGATNVMLWERGRDEPTVWSVEVVDAAAHAVLDDSAPRVNAYGGTAV
CCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCEEECCCCEEE
LRGTSASLDAHERAVAVGKNMAGKGAVIDRSTLAGKSVVQVDVRVVEFSRSVLKQVGFNF
EECCCCCCCHHHHHHHHCCCCCCCCCEEECHHCCCCEEEEEEHHHHHHHHHHHHHHCHHH
FKQSNGFSFGSFLPSGVQSFGGGSGPGSAGYIPTLGSPVASAFNLVVNAAGRGIFGDLSL
HHCCCCCCHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEE
LEANNLARVLAEPTLVALSGQSASFLAGGEIPVPSPQGLGSTAIQWKQYGVGLSLTPTVL
ECCCCHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCCHHEEHHHHCCCEEECCCCC
SPQRIALKVAPESSQLDFVNSVTISGVAVPGITTRRADTTVELGDGESFVIGGLIDRQTM
CCCEEEEEECCCCCCCEEEEEEEECEEEECCCEECCCCCEEEECCCCEEEEECEECHHHH
SNVSKVPLLGDLPIIGTFFKNLNYQQNDKELLIIVTPHLVAPIAKGAALPATPGELSEQR
HHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCHHHCC
DGPVWRSYLGGVASPDAAPGFSK
CCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]