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The map label for this gene is ybbI [C]

Identifier: 161524870

GI number: 161524870

Start: 1870609

End: 1871082

Strand: Reverse

Name: ybbI [C]

Synonym: Bmul_1697

Alternate gene names: 161524870

Gene position: 1871082-1870609 (Counterclockwise)

Preceding gene: 161524871

Following gene: 161524868

Centisome position: 54.26

GC content: 66.46

Gene sequence:

>474_bases
ATGAAGATAGGCGAGCTGGCCGAGCGCACCGGCCTGACGCCGTCGCGCATCCGTTTCTATGAGCGCATCGGCCTGCTGAC
GGCGGTCGGGCGGCAACCGAACGGCTATCGCGTCTATTCGCCGGACGCCGTGGTGCTGCTCGGCCTCGTCGCGACCGCGC
AGAAAGCCGGCTTCAGCCTGGACGAGATCCGCATGTTGCTGCCGCCCGATCTTGGGCAGTGGCAGCGCGGTGCGCTGCTC
GAAGCGCTGCGCAACAAGGTGCGCGACATCGAGGCCATGCAGATCAAGCTGACACAGAACAAGGCGCATCTCGTGTCCTT
GATGGCCGAGATCGAGGGCAAGCCCGACGAAATCGATTGCAGCACCAACGCGGCGCGCCTGTTGTCGCAGATGCAGTCGA
GGGAACCCGACGGCGCGGCGCGAACGCACGGGACAGTCAAGGCCGCACGACGCCGACCGACCGGCAAGGGGTAG

Upstream 100 bases:

>100_bases
ATGGACTCGGGGCGTCCACTGTGCTTCGCATGGACGTCGTCAAGGACGCACAAGTGGTCTTGAACATGCCGACCCGGCTG
GACACTTTCAGATCCATGAC

Downstream 100 bases:

>100_bases
GCGATGTGCACGTGAGGGCGTTCTGGCGCCGTCGTCGTCAATCGCTCGAGCACCGCCGTGCGGCATGCGTCTCTCAGCGC
TTGCGGACGATCAGCCCAGG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKIGELAERTGLTPSRIRFYERIGLLTAVGRQPNGYRVYSPDAVVLLGLVATAQKAGFSLDEIRMLLPPDLGQWQRGALL
EALRNKVRDIEAMQIKLTQNKAHLVSLMAEIEGKPDEIDCSTNAARLLSQMQSREPDGAARTHGTVKAARRRPTGKG

Sequences:

>Translated_157_residues
MKIGELAERTGLTPSRIRFYERIGLLTAVGRQPNGYRVYSPDAVVLLGLVATAQKAGFSLDEIRMLLPPDLGQWQRGALL
EALRNKVRDIEAMQIKLTQNKAHLVSLMAEIEGKPDEIDCSTNAARLLSQMQSREPDGAARTHGTVKAARRRPTGKG
>Mature_157_residues
MKIGELAERTGLTPSRIRFYERIGLLTAVGRQPNGYRVYSPDAVVLLGLVATAQKAGFSLDEIRMLLPPDLGQWQRGALL
EALRNKVRDIEAMQIKLTQNKAHLVSLMAEIEGKPDEIDCSTNAARLLSQMQSREPDGAARTHGTVKAARRRPTGKG

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011789
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 17276; Mature: 17276

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGELAERTGLTPSRIRFYERIGLLTAVGRQPNGYRVYSPDAVVLLGLVATAQKAGFSL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCH
DEIRMLLPPDLGQWQRGALLEALRNKVRDIEAMQIKLTQNKAHLVSLMAEIEGKPDEIDC
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHHHCCCCCCCCC
STNAARLLSQMQSREPDGAARTHGTVKAARRRPTGKG
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIGELAERTGLTPSRIRFYERIGLLTAVGRQPNGYRVYSPDAVVLLGLVATAQKAGFSL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCH
DEIRMLLPPDLGQWQRGALLEALRNKVRDIEAMQIKLTQNKAHLVSLMAEIEGKPDEIDC
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHHHCCCCCCCCC
STNAARLLSQMQSREPDGAARTHGTVKAARRRPTGKG
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]