Click here to switch to the map view.

The map label for this gene is yraQ [H]

Identifier: 161524817

GI number: 161524817

Start: 1819256

End: 1820314

Strand: Reverse

Name: yraQ [H]

Synonym: Bmul_1644

Alternate gene names: 161524817

Gene position: 1820314-1819256 (Counterclockwise)

Preceding gene: 161524818

Following gene: 161524816

Centisome position: 52.79

GC content: 70.25

Gene sequence:

>1059_bases
ATGACGACCACACGCACGCAACCCGTTCCGGCGCTCGGCTGGATGACCTTCCTGCTGATCGCGGTCGCAGGACTGTTCTA
CGTCAAATGGTTTCCGTACTACAACAAGGCGTTCGTCGCCGCCGAACATCATTCGATCGGCCAGTCGATCCTGATGGGCA
CGGCGGCGTCGGCGCCCGAGCCGTCGCTGAAGGCCGCGCTCGACTACGCGTGGGCGTACGGCAAGGCGATCTGGCAGGCG
ATGGTGCTCGGCCTGCTGCTCGGCTCGGCCGTGCAGGCGCTGCTGCCCGCGCACTGGGTCGCGCGCGTGCTCGGCCGCAC
CGGCTTCGGCAGCGTCGCGGCCGGCGGCCTGCTGTCGCTGCCGGGCATGATGTGCACGTGCTGCGCGGCGCCGGTCGTCG
CGGGCTTGCGCGCGCGCCACGCGTCGCCGGGCGGCGCCGTCGCGTTCTGGCTCGGCAATACCGTGCTGAACCCGGCCGCG
CTGGTGTTCATGGGCTTCGTGCTCGGCTGGCACTGGAGTGCGCTGCGGCTCGTGCTGGGCATCGCGATGGTGTTCGGCAT
CGGCTATCTGCTGAACCGCATCGCGCGGCCGGAGGATCGCAGCATCGACGACGCGCAGCTCGCGGCGCTGGCGGCCGAGC
AGGCCGCGGCCGGCAACGCGTTCGTGCGCTGGATCAAGCTGCTCGCGCGGATGGCGGTGCGGCTCGTGCCCGAATACGTC
GTGCTCGTGCTGCTGCTCGGCGCCGCGCGTGCGTGGCTGTTTCCGCACATCGGGCCGGACATCGGCAATCATCTCGGCTG
GATCGTCGCGTTCGCGGTGGCCGGCGCGCTGTTCGTGATTCCGACGGCCGGCGAGGTGCCGATCATCCAGGCGATGCTGT
CGCTCGGCATGGGCGTCGGGCCCGCCGCGGCGCTGCTGATGACGCTGCCGCCGATCAGCGTGCCGTCGCTCGCGATGCTC
GCACGGTCGTTCAAGCCGTACATGCTGGCGATTGTCGCGAGCCTCGTCGTCGTGTTCGGGATCGCGAGCGGGCTGCTCGC
GATCGCGTTCGGATTCTGA

Upstream 100 bases:

>100_bases
TCGAGCAGCTCGCGCAGGCGGGCTTGCCCGCGTCGCCGGCCTACGCGTCGGCGTCCGCCGCGGCGCCGATTACCGCTCAC
GACCATCCGACCACCTCACG

Downstream 100 bases:

>100_bases
GGCTGACGCACATCGGCCGCGCGCGGCCCGTGTGCGCGCCGTATTCATCCGGCACCGCCGCCGATTCGCGTGGTGCCCTT
TACAAGAAGCAAACAGGAAA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTTTRTQPVPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTAASAPEPSLKAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAA
LVFMGFVLGWHWSALRLVLGIAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNAFVRWIKLLARMAVRLVPEYV
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGALFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAML
ARSFKPYMLAIVASLVVVFGIASGLLAIAFGF

Sequences:

>Translated_352_residues
MTTTRTQPVPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTAASAPEPSLKAALDYAWAYGKAIWQA
MVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAA
LVFMGFVLGWHWSALRLVLGIAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNAFVRWIKLLARMAVRLVPEYV
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGALFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAML
ARSFKPYMLAIVASLVVVFGIASGLLAIAFGF
>Mature_351_residues
TTTRTQPVPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTAASAPEPSLKAALDYAWAYGKAIWQAM
VLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSLPGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAAL
VFMGFVLGWHWSALRLVLGIAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNAFVRWIKLLARMAVRLVPEYVV
LVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGALFVIPTAGEVPIIQAMLSLGMGVGPAAALLMTLPPISVPSLAMLA
RSFKPYMLAIVASLVVVFGIASGLLAIAFGF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=334, Percent_Identity=51.497005988024, Blast_Score=312, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 36967; Mature: 36835

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTRTQPVPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTAASAPE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHCCCCCCC
PSLKAALDYAWAYGKAIWQAMVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHH
PGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAALVFMGFVLGWHWSALRLVLG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNAFVRWIKLLARMAVRLVPEYV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGALFVIPTAGEVPIIQAMLSLGMGVG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCC
PAAALLMTLPPISVPSLAMLARSFKPYMLAIVASLVVVFGIASGLLAIAFGF
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTTRTQPVPALGWMTFLLIAVAGLFYVKWFPYYNKAFVAAEHHSIGQSILMGTAASAPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHCCCCCCC
PSLKAALDYAWAYGKAIWQAMVLGLLLGSAVQALLPAHWVARVLGRTGFGSVAAGGLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHH
PGMMCTCCAAPVVAGLRARHASPGGAVAFWLGNTVLNPAALVFMGFVLGWHWSALRLVLG
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAMVFGIGYLLNRIARPEDRSIDDAQLAALAAEQAAAGNAFVRWIKLLARMAVRLVPEYV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VLVLLLGAARAWLFPHIGPDIGNHLGWIVAFAVAGALFVIPTAGEVPIIQAMLSLGMGVG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCC
PAAALLMTLPPISVPSLAMLARSFKPYMLAIVASLVVVFGIASGLLAIAFGF
HHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]