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The map label for this gene is yecS [H]

Identifier: 161524792

GI number: 161524792

Start: 1790998

End: 1791750

Strand: Reverse

Name: yecS [H]

Synonym: Bmul_1619

Alternate gene names: 161524792

Gene position: 1791750-1790998 (Counterclockwise)

Preceding gene: 161524793

Following gene: 161524789

Centisome position: 51.96

GC content: 70.52

Gene sequence:

>753_bases
ATGGATTGGACGCTGCTGCTGTCGAATCTGCCGTACCTGCTCGTCGGCGCGTTTCCGGACGGCCCGCTCGGCGGCGCCGC
GCTCTCGCTCGTGCTCGCGATCGCGTCGGCGCTCGCCTCGGCGGTGCTCGGTGTCGCGCTCGGCGTGGCGATGACGCTCG
CGCGCGGCCCGCTGCGCGTGCTGCTGCTCGCCGCGATCGGCTTCTTTCGCGCGATTCCGGTGCTGATGCTGATCTTCTGG
ACGTATTTCCTGATGCCGATCCTGCTGCATACCGACGTGCCGGGGCTCGCGACCGTCGTGTGCGCGCTTGCGCTCGTCGG
CGGCGCGTATCTCGCGCACGCCGTGCATGCGGGAATCGTCGCGGCGGGCGCCGGCCAGTGGCAAGCGGGGCTGTCGCTCG
GGCTCACGCGCTGGCAGACCGTGCGCCACGTGCTGTTGCCGCAGGCCGTGCGGATCATGACGCCGTCGTTCGTGAACCAG
TGGGTCGCGCTCGTGAAGGACACGTCGCTCGCGTATATCGTCGGCGTGCCGGAACTGTCGTTCGTCGCGACGCAGGTGAA
CAACCGGCTGATGGTGTATCCGGCGCCGATCTTCCTGTTCGTCGCCGCGATCTACCTCATCATCTGCACGTCGCTCGACG
GCGCCGCGCGCTGGTTGCTGTCACGCGGCCCGCGCGAGCGGCGCCGCGCATGCGACACCGCGGCGTGCACGCCGCGCGCG
CCGCGTATCGCGGCCGATCAGGACGCCGCGTAG

Upstream 100 bases:

>100_bases
GCATCGCGACCTTGCTCTACGTCGCGACGGTCGCGGCGATCGAGGCCGGCGCGTACGCGACCACGCAGTGGCGCGACCGG
CTCGGCACCGGGCGGTGACG

Downstream 100 bases:

>100_bases
TGCGTGTCGAACACGGCGCGCAGCGTCGATTTGTCGATCGCGAAGTCGCCCCACAGCGGGCCGTCGTTCTGCACGAACGC
GAACGGCGCGGTGCTGATCG

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDWTLLLSNLPYLLVGAFPDGPLGGAALSLVLAIASALASAVLGVALGVAMTLARGPLRVLLLAAIGFFRAIPVLMLIFW
TYFLMPILLHTDVPGLATVVCALALVGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQ
WVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLIICTSLDGAARWLLSRGPRERRRACDTAACTPRA
PRIAADQDAA

Sequences:

>Translated_250_residues
MDWTLLLSNLPYLLVGAFPDGPLGGAALSLVLAIASALASAVLGVALGVAMTLARGPLRVLLLAAIGFFRAIPVLMLIFW
TYFLMPILLHTDVPGLATVVCALALVGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQ
WVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLIICTSLDGAARWLLSRGPRERRRACDTAACTPRA
PRIAADQDAA
>Mature_250_residues
MDWTLLLSNLPYLLVGAFPDGPLGGAALSLVLAIASALASAVLGVALGVAMTLARGPLRVLLLAAIGFFRAIPVLMLIFW
TYFLMPILLHTDVPGLATVVCALALVGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQ
WVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLIICTSLDGAARWLLSRGPRERRRACDTAACTPRA
PRIAADQDAA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=226, Percent_Identity=31.858407079646, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=29.2792792792793, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1787030, Length=227, Percent_Identity=29.9559471365639, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI87082239, Length=203, Percent_Identity=30.0492610837438, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=25.1141552511416, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48994930, Length=87, Percent_Identity=39.0804597701149, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787087, Length=179, Percent_Identity=29.608938547486, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=27.3148148148148, Blast_Score=61, Evalue=8e-11,
Organism=Escherichia coli, GI1786874, Length=169, Percent_Identity=27.2189349112426, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26491; Mature: 26491

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWTLLLSNLPYLLVGAFPDGPLGGAALSLVLAIASALASAVLGVALGVAMTLARGPLRV
CCCEEEHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLLAAIGFFRAIPVLMLIFWTYFLMPILLHTDVPGLATVVCALALVGGAYLAHAVHAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVKDTSLAYIVGVPELS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCHH
FVATQVNNRLMVYPAPIFLFVAAIYLIICTSLDGAARWLLSRGPRERRRACDTAACTPRA
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCCC
PRIAADQDAA
CCCCCCCCCC
>Mature Secondary Structure
MDWTLLLSNLPYLLVGAFPDGPLGGAALSLVLAIASALASAVLGVALGVAMTLARGPLRV
CCCEEEHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LLLAAIGFFRAIPVLMLIFWTYFLMPILLHTDVPGLATVVCALALVGGAYLAHAVHAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVKDTSLAYIVGVPELS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCHH
FVATQVNNRLMVYPAPIFLFVAAIYLIICTSLDGAARWLLSRGPRERRRACDTAACTPRA
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCCCC
PRIAADQDAA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]