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The map label for this gene is fecI [C]

Identifier: 161524779

GI number: 161524779

Start: 1775695

End: 1776342

Strand: Reverse

Name: fecI [C]

Synonym: Bmul_1606

Alternate gene names: 161524779

Gene position: 1776342-1775695 (Counterclockwise)

Preceding gene: 161524782

Following gene: 161524778

Centisome position: 51.51

GC content: 70.22

Gene sequence:

>648_bases
ATGGCAATGGCTGACGTGCTCGAACGACCGGTCGCGGCACCGGCGAATCGGTTTCCCGGAAGCGGCGCCGTGCGCGCGCG
ACGCCGCGCCGAGCCGCGTGCGCAAGGTGCGCTGCTCGACGTGCTGATCGCGCATCGCGCCATGCTGGTCAACGTCGCGC
GCGGTTTTCTCGGCTGCGCGAGCCGCGCGGAGGACATCGTGCACGACGTGTTCGTGAAGCTCGTCGACTTTCCGAACCAG
GACGCCGTGCGCCAGCCGGTCGCGTACGTGACGCGGATGGTGCGCAATGCATCGATCGACGCGTGCCGTCGCCAGAATCT
CGAAAACATCCATCATGCGGACGAAGACGACGGCTTCGACGTGCCGTCGCCGGAGCCGACGCCCGAAGCCGCGCTGATCA
CGCGCGACACGCTGCGCCGCGTATCGGCCGCGCTCGACGATCTGCCCGCGCGCAGCCGCGCGGCATTCGAGATGGTGCGG
CTGCGCGAGGAAACCTTGCAGACGGCGGCGCGCGCGCTGAACGTGTCGCAGACGCTCGTGCATTTCATGGTGCGCGACGC
CGAGCGCCACTGCGCGGCGTGCCTCGACGCCTGCCAGCGCGGCGTCGCGTGCCCGGTATTTCTCGGCGGCCGCACGCGGC
GCCGGTAA

Upstream 100 bases:

>100_bases
AGACTATTCCCCACACCCGGGAGGGGTGTTGGTAATCGCATTGAGAATGATTTGCGTTTACGTTACATTCCGCTATCTCG
GAATACGACGGAGCAGATCG

Downstream 100 bases:

>100_bases
AAAATTGCACGGCTCGTTCGTCTTCGATACAGGAGCGGCCGCATCGCCGCTTCGCACCTTCAACCGTCTCAAGCGATTTC
CGATCATGACGCAAGCCACG

Product: extracytoplasmic-function sigma-70 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Family Protein; ECF Subfamily RNA Polymerase Sigma-70 Factor; Sigma Factor; RNA Polymerase Sigma Factor FECI Protein; Ferric Regulator Sigma-24 Subunit; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; FecI Like Protein; RNA Polymerase Sigma Factor Protein; ECF Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MAMADVLERPVAAPANRFPGSGAVRARRRAEPRAQGALLDVLIAHRAMLVNVARGFLGCASRAEDIVHDVFVKLVDFPNQ
DAVRQPVAYVTRMVRNASIDACRRQNLENIHHADEDDGFDVPSPEPTPEAALITRDTLRRVSAALDDLPARSRAAFEMVR
LREETLQTAARALNVSQTLVHFMVRDAERHCAACLDACQRGVACPVFLGGRTRRR

Sequences:

>Translated_215_residues
MAMADVLERPVAAPANRFPGSGAVRARRRAEPRAQGALLDVLIAHRAMLVNVARGFLGCASRAEDIVHDVFVKLVDFPNQ
DAVRQPVAYVTRMVRNASIDACRRQNLENIHHADEDDGFDVPSPEPTPEAALITRDTLRRVSAALDDLPARSRAAFEMVR
LREETLQTAARALNVSQTLVHFMVRDAERHCAACLDACQRGVACPVFLGGRTRRR
>Mature_214_residues
AMADVLERPVAAPANRFPGSGAVRARRRAEPRAQGALLDVLIAHRAMLVNVARGFLGCASRAEDIVHDVFVKLVDFPNQD
AVRQPVAYVTRMVRNASIDACRRQNLENIHHADEDDGFDVPSPEPTPEAALITRDTLRRVSAALDDLPARSRAAFEMVRL
REETLQTAARALNVSQTLVHFMVRDAERHCAACLDACQRGVACPVFLGGRTRRR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23727; Mature: 23596

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMADVLERPVAAPANRFPGSGAVRARRRAEPRAQGALLDVLIAHRAMLVNVARGFLGCA
CCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAEDIVHDVFVKLVDFPNQDAVRQPVAYVTRMVRNASIDACRRQNLENIHHADEDDGFD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHCCCCCCCCC
VPSPEPTPEAALITRDTLRRVSAALDDLPARSRAAFEMVRLREETLQTAARALNVSQTLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFMVRDAERHCAACLDACQRGVACPVFLGGRTRRR
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
AMADVLERPVAAPANRFPGSGAVRARRRAEPRAQGALLDVLIAHRAMLVNVARGFLGCA
CHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAEDIVHDVFVKLVDFPNQDAVRQPVAYVTRMVRNASIDACRRQNLENIHHADEDDGFD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHCCCCCCCCC
VPSPEPTPEAALITRDTLRRVSAALDDLPARSRAAFEMVRLREETLQTAARALNVSQTLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFMVRDAERHCAACLDACQRGVACPVFLGGRTRRR
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA