Click here to switch to the map view.

The map label for this gene is hoxN [H]

Identifier: 161524757

GI number: 161524757

Start: 1737703

End: 1738761

Strand: Reverse

Name: hoxN [H]

Synonym: Bmul_1584

Alternate gene names: 161524757

Gene position: 1738761-1737703 (Counterclockwise)

Preceding gene: 161524762

Following gene: 161524756

Centisome position: 50.42

GC content: 65.44

Gene sequence:

>1059_bases
ATGCTCGATTCTTTCTTACGTCTATTCAACGACAGCCCGTCGGGGCTGCGCGGCAAGATTGTCGCCATCTATTCGCTGCT
CGTCGCGTTCAACGTCGGCGCGTGGATCTGGGCGTTTATCGCGTTTCACGGGCAGCCGGTGCTGCTCGGCACCGCGCTGC
TCGCGTATGTCTTCGGGCTGCGTCACGCCGTCGACGCGGATCATATCGCCGCCATCGACAACGTCACGCGCAAGCTGATG
CAGGAAGGGCGCAGCCCGCTCGGCGCGGGGCTGTTCTTCTCGCTCGGGCATTCGACGGTCGTGATCGTGATGTCGATCGC
GGTTGCGTTGACCGCCGCGTCGCTCGCACGCTTCGAGAGCATGAAGACGTGGGGCGGCGTGATCAGCACGAGCGTGTCCG
CGTTCTTCCTGCTCGTGCTCGCGGCCGCGAACCTGCTGATCCTGATCTCCGTGTACCGGACGTTTCGCGCGGCACGGCGC
GGCGACGCGATCGTCGACGCCGATCTCGACATGCTGCTGAACCGGCGCGGCGTGCTCGCGCGCGTGTTCCGGCCGCTGTT
CCGGCTCGTGTCGCGCAGCTGGCACCTGTACCCGGTCGGCTTCCTGTTCGGCTTCGGCTTCGATACCGCGACCGAGATCG
CGCTGTTCGGCATCTCCGCGACGCAGGTGCAGGGCGGGCTGTCGTTCTGGTCGGTGATGGCGCTGCCGGTGCTGTTTACC
GCGGGCATGACGCTCGTCGACACGACCGACGGCATCCTGATGATGGGTGCGTATCGCTGGGCGTACGTGCGGCCGATCCG
CAAGATCTACTACAACATGACGATCACGTTCGTGTCGGTGCTGGTCGCCGCGCTGATCGGCGGCATCGAGGTGCTCGCGC
TGCTCGCGGACAAGCTGTCGCTGCAGGGGCCCGTCTGGGATTTCGCGACGATGGTCGCGTCGCATTTCGGGATGCTCGGC
TACGTCGTGATCGGCCTGTTCGTCGCGTGCTGGGCCGTGTCGGCCGCGATCTACCGCTTCAAACGCTACGACGAGATCGA
CGTGACGATCTCCGCGTGA

Upstream 100 bases:

>100_bases
CAGGCCGCGCGCGCGGTGCGAACCGGCAGGCAAGCGGCGCCGGCAGGCACGGTGCGGACCGTGTTGGCATTCACATGTCG
ACCGTTCATCGCGGAGCACC

Downstream 100 bases:

>100_bases
TGCCTTTTTCGACCGAGGACCTACCATGACCCTACGCAAGCTGCCCGTCACGATCGTCACGGGCTTTCTCGGCAGCGGCA
AGACCACGCTGATGCGCCAC

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MLDSFLRLFNDSPSGLRGKIVAIYSLLVAFNVGAWIWAFIAFHGQPVLLGTALLAYVFGLRHAVDADHIAAIDNVTRKLM
QEGRSPLGAGLFFSLGHSTVVIVMSIAVALTAASLARFESMKTWGGVISTSVSAFFLLVLAAANLLILISVYRTFRAARR
GDAIVDADLDMLLNRRGVLARVFRPLFRLVSRSWHLYPVGFLFGFGFDTATEIALFGISATQVQGGLSFWSVMALPVLFT
AGMTLVDTTDGILMMGAYRWAYVRPIRKIYYNMTITFVSVLVAALIGGIEVLALLADKLSLQGPVWDFATMVASHFGMLG
YVVIGLFVACWAVSAAIYRFKRYDEIDVTISA

Sequences:

>Translated_352_residues
MLDSFLRLFNDSPSGLRGKIVAIYSLLVAFNVGAWIWAFIAFHGQPVLLGTALLAYVFGLRHAVDADHIAAIDNVTRKLM
QEGRSPLGAGLFFSLGHSTVVIVMSIAVALTAASLARFESMKTWGGVISTSVSAFFLLVLAAANLLILISVYRTFRAARR
GDAIVDADLDMLLNRRGVLARVFRPLFRLVSRSWHLYPVGFLFGFGFDTATEIALFGISATQVQGGLSFWSVMALPVLFT
AGMTLVDTTDGILMMGAYRWAYVRPIRKIYYNMTITFVSVLVAALIGGIEVLALLADKLSLQGPVWDFATMVASHFGMLG
YVVIGLFVACWAVSAAIYRFKRYDEIDVTISA
>Mature_352_residues
MLDSFLRLFNDSPSGLRGKIVAIYSLLVAFNVGAWIWAFIAFHGQPVLLGTALLAYVFGLRHAVDADHIAAIDNVTRKLM
QEGRSPLGAGLFFSLGHSTVVIVMSIAVALTAASLARFESMKTWGGVISTSVSAFFLLVLAAANLLILISVYRTFRAARR
GDAIVDADLDMLLNRRGVLARVFRPLFRLVSRSWHLYPVGFLFGFGFDTATEIALFGISATQVQGGLSFWSVMALPVLFT
AGMTLVDTTDGILMMGAYRWAYVRPIRKIYYNMTITFVSVLVAALIGGIEVLALLADKLSLQGPVWDFATMVASHFGMLG
YVVIGLFVACWAVSAAIYRFKRYDEIDVTISA

Specific function: High-affinity nickel transporter responsible for nickel uptake. Necessary for high levels of activity of hydrogenase and urease [H]

COG id: COG3376

COG function: function code P; High-affinity nickel permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004688
- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 38450; Mature: 38450

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure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CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847142; 7896709; 12948488; 7934894 [H]