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The map label for this gene is ydhO [H]

Identifier: 161524580

GI number: 161524580

Start: 1548569

End: 1549678

Strand: Reverse

Name: ydhO [H]

Synonym: Bmul_1407

Alternate gene names: 161524580

Gene position: 1549678-1548569 (Counterclockwise)

Preceding gene: 161524581

Following gene: 161524569

Centisome position: 44.94

GC content: 71.89

Gene sequence:

>1110_bases
ATGCTTCGAATCTGGGTTCCCGTCGCCGTCGTTTCGCTGCTTGCGGCCTGCTCCAGCGTGCCGCCGCAGACGGCGTCGCG
CTCGTCCGGCATGACGATCAAGACGCCGCGCGCGTTCCCGCCGCCCGCCAATTTCCCGAAATTCGTCGATCACAGCGTCG
GCCAGGAAGAAATCTCGATCCAGGCGATGAGCCTCGTCGGCGTACCGTATCGCTGGGGCGGCAACACGCCCACGAGCGGC
TTCGACTGCAGCGGGCTCGTGCGCTACGTGATGGACCGCGCGGCCGACGTAAACCTGCCGCGTACGACGGCCGACATGAG
CAGCCGCGGCGTGTCGATCGAACCCGACCAGATCGCGCCCGGCGACCTGATCTTCTTCAACACGACCGGCCGCCCGCATT
CGCATGTCGGCATCTATGTCGGCAAGCTGCGCTTCGTGAATGCGCCGTCGACGGGCGGCACCGTGCGGCTCGATTACCTG
ACCAATCCGTATTGGGCGAAGCGCTTCGACGGCATTCGCCGCGTCGCGCCGCCGCGCGCGAAGCCGACGCCGTTCGATGC
GCCGACGTACGAAGCGCGGCGCGACGAGTCGCGCACGCCGGCGACGGTTGTATCGGCGCCGACGCCGGCCGCCCCCGCAC
CGGTCGTGACGGCCGCGGCATCGCAGCCGCCGGCTTATGCGGCGACGCAAGCACCACGCGTATCGGCGGCACCGCCCGCA
GCCGTCGCCGCGGCAGCCGCGCCCGTATCGACGGTATCCACTGTCTCGACTGCGGCAGCCGCGCCTGCGGATCCGTACGA
GCCGCCGCCGGCCCGCTTGTCCGCGGCCCGGCAACAGGCGGCGTCCGCGGGCGGCGACGCGATCGCCGCGACGTCGAACA
CGATGCCGGCCGGCACGCCGGAAGTCGGCACGCCGATTCCGACGACGGCGCTGACCGCCGCGGAAGCCGCCGCATTCGAT
GCCGAACCGCCGGCTGCCGCCGCGCCGTCGCGCGATAGCGAGCCGGCCGCCGTTCAGGTGCTGCGCGCGTCGACGCAGTC
CCCGCCGGTCGGCGCCCGCACCGGCACGGCCGACGACCCGATCGCCCGCTTCGCGAACGGCAGCTACTGA

Upstream 100 bases:

>100_bases
AAATTCTCAGGAATGGTTGCGCAAGCCCCGTCGGAGCGTCTACCATCGGGCCTATCCGTTGTCATACGAATCAGGGTGCG
CCGCGCCCGTTCCGTCTTTC

Downstream 100 bases:

>100_bases
CGCCCTCGGGCCGGCACGCCGGGTTCACGTACGTCGAGGGATCCCCACACCATCGTGGCGCGCTGTCCGCATTGAGCGGC
TCAAGCCGCCATCGTTTCAC

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLRIWVPVAVVSLLAACSSVPPQTASRSSGMTIKTPRAFPPPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTSG
FDCSGLVRYVMDRAADVNLPRTTADMSSRGVSIEPDQIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYL
TNPYWAKRFDGIRRVAPPRAKPTPFDAPTYEARRDESRTPATVVSAPTPAAPAPVVTAAASQPPAYAATQAPRVSAAPPA
AVAAAAAPVSTVSTVSTAAAAPADPYEPPPARLSAARQQAASAGGDAIAATSNTMPAGTPEVGTPIPTTALTAAEAAAFD
AEPPAAAAPSRDSEPAAVQVLRASTQSPPVGARTGTADDPIARFANGSY

Sequences:

>Translated_369_residues
MLRIWVPVAVVSLLAACSSVPPQTASRSSGMTIKTPRAFPPPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTSG
FDCSGLVRYVMDRAADVNLPRTTADMSSRGVSIEPDQIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYL
TNPYWAKRFDGIRRVAPPRAKPTPFDAPTYEARRDESRTPATVVSAPTPAAPAPVVTAAASQPPAYAATQAPRVSAAPPA
AVAAAAAPVSTVSTVSTAAAAPADPYEPPPARLSAARQQAASAGGDAIAATSNTMPAGTPEVGTPIPTTALTAAEAAAFD
AEPPAAAAPSRDSEPAAVQVLRASTQSPPVGARTGTADDPIARFANGSY
>Mature_369_residues
MLRIWVPVAVVSLLAACSSVPPQTASRSSGMTIKTPRAFPPPANFPKFVDHSVGQEEISIQAMSLVGVPYRWGGNTPTSG
FDCSGLVRYVMDRAADVNLPRTTADMSSRGVSIEPDQIAPGDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYL
TNPYWAKRFDGIRRVAPPRAKPTPFDAPTYEARRDESRTPATVVSAPTPAAPAPVVTAAASQPPAYAATQAPRVSAAPPA
AVAAAAAPVSTVSTVSTAAAAPADPYEPPPARLSAARQQAASAGGDAIAATSNTMPAGTPEVGTPIPTTALTAAEAAAFD
AEPPAAAAPSRDSEPAAVQVLRASTQSPPVGARTGTADDPIARFANGSY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=122, Percent_Identity=41.8032786885246, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786421, Length=130, Percent_Identity=37.6923076923077, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1788501, Length=176, Percent_Identity=34.0909090909091, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788001, Length=119, Percent_Identity=42.0168067226891, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 37857; Mature: 37857

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIWVPVAVVSLLAACSSVPPQTASRSSGMTIKTPRAFPPPANFPKFVDHSVGQEEISI
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHEE
QAMSLVGVPYRWGGNTPTSGFDCSGLVRYVMDRAADVNLPRTTADMSSRGVSIEPDQIAP
EEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCC
GDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKRFDGIRRVAPPRA
CCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC
KPTPFDAPTYEARRDESRTPATVVSAPTPAAPAPVVTAAASQPPAYAATQAPRVSAAPPA
CCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCH
AVAAAAAPVSTVSTVSTAAAAPADPYEPPPARLSAARQQAASAGGDAIAATSNTMPAGTP
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
EVGTPIPTTALTAAEAAAFDAEPPAAAAPSRDSEPAAVQVLRASTQSPPVGARTGTADDP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH
IARFANGSY
HHHHCCCCC
>Mature Secondary Structure
MLRIWVPVAVVSLLAACSSVPPQTASRSSGMTIKTPRAFPPPANFPKFVDHSVGQEEISI
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHHHEE
QAMSLVGVPYRWGGNTPTSGFDCSGLVRYVMDRAADVNLPRTTADMSSRGVSIEPDQIAP
EEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCC
GDLIFFNTTGRPHSHVGIYVGKLRFVNAPSTGGTVRLDYLTNPYWAKRFDGIRRVAPPRA
CCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC
KPTPFDAPTYEARRDESRTPATVVSAPTPAAPAPVVTAAASQPPAYAATQAPRVSAAPPA
CCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCH
AVAAAAAPVSTVSTVSTAAAAPADPYEPPPARLSAARQQAASAGGDAIAATSNTMPAGTP
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
EVGTPIPTTALTAAEAAAFDAEPPAAAAPSRDSEPAAVQVLRASTQSPPVGARTGTADDP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH
IARFANGSY
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]