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The map label for this gene is ydiU [C]

Identifier: 161524539

GI number: 161524539

Start: 1506104

End: 1507672

Strand: Reverse

Name: ydiU [C]

Synonym: Bmul_1366

Alternate gene names: 161524539

Gene position: 1507672-1506104 (Counterclockwise)

Preceding gene: 161524545

Following gene: 161524538

Centisome position: 43.72

GC content: 69.98

Gene sequence:

>1569_bases
ATGTCGTTTTCCCGAAGCGCAGCCGATCCGGCTGACACCCTGCCCGACCTCGCCGCGACGCTCGCCGCGCCCGACACCCA
CGCGTTCCTGCGGCTCGGCGACGCGTTTCATACGCGGCTGCCGGCCGCACCGCTCGCGGCGCCGTACGTGGTCGGCTTTT
CCGACGAAGTCGCGCGCCTGCTCGGGCTGCCCGCGTCGCTCGCCGCGCAGCCCGGCTTCGCCGAGCTGTTCGCCGGCAAT
CCGACGCGCGACTGGCCTGCCGAGGCGCTGCCCTACGCGTCCGTGTACTCCGGCCATCAGTTCGGCGTCTGGGCCGGCCA
GCTCGGCGACGGCCGCGCGCTGACGATTGGCGAGTTGCCCGGCACGGACGGGCGGCGCTACGAGCTGCAGCTCAAAGGCA
GCGGCCGCACGCCGTATTCGCGGATGGGCGACGGCCGCGCGGTGCTGCGCTCGTCGATCCGCGAATTCCTGTGCTCCGAA
GCGATGCACCACCTCGGCATCCCGACCACGCGCGCGCTGACCGTGATCGGCTCCGACCAGCCGGTCGTGCGCGAGGAGAT
CGAGACGGCGGCCGTCGTCACGCGCGTGTCGGAGAGCTTCGTGCGCTTCGGCCATTTCGAGCACTTCTTCTCGAACAATC
GCCCCGATCTGCTGCGCGCGCTCGCCGATCACGTGATCGACCGCTTCTATCCGGCCTGCCGCGACGCCGACGATCCCTAT
CTCGCGCTGCTCGAAGCCGCGACGCGGCGCACGGCCGAGCTCGTCGCGCAATGGCAGGCCGTCGGGTTCTGCCACGGCGT
GATGAACACCGACAACATGTCGATCCTCGGCGTGACGATCGACTACGGCCCGTTCGGCTTCGTCGACGCGTTCGACGCGA
ACCACATCTGCAACCACTCGGACACGGGCGGCCGCTATGCATACCGGATGCAGCCGCGCATCGCGCACTGGAACTGCTAC
TGCCTCGCGCAGGCGCTGCTGCCGCTGATCGGGCTGCAGCACGGCATCGCCGACGACGACGCGCGCGCGGAGCGCGCGGT
CGACGATGCGCAGGCCGTGCTCGCGACCTTCCCCGAGCGTTTCGGTCCCGCGCTCGAGCGCGCGATGCGCGCGAAGCTCG
GCCTCGCGCTCGAACGCGACGGCGACGCGGCGCTCGCGAACCAGCTGCTCGAGACGATGCATGCGAGCCGTGCCGACTTC
ACGCTGACGTTTCGCCGGCTCGCGCAGCTCTCCAAGCACGACGCGAGCCGCGACGCGCCCGTGCGCGACCTGTTCATCGA
CCGCGAGGCATTCGACGCATGGGCGAACCTCTACCGTGCGCGGCTCTCGGAGGAAACGCGCGACGATGCCGCGCGCGCAG
CCGCGATGAACCGCGTGAACCCGAAATACGTGCTGCGCAACCATCTGGCCGAACTCGCGATCCGGCGCGCGAAGGAGAAG
GACTTTTCCGAAGTCGAACGGCTCGCGCAGGTGCTGCGCCGCCCGTTCGACGAACAGCCGGAACATGAATCGTACGCGGC
GTTGCCGCCCGACTGGGCCGGGTCGCTCGAAGTGAGCTGCTCGTCGTAA

Upstream 100 bases:

>100_bases
CGGCGCGCGGCGGCCCGGGCGGGCGGCGTGCATCGCGCGGGCCGCCATGCGGGCGGCGCAGCGCCGCCTTACAATATCGG
CTTACCCAGAGGCGCTCAAC

Downstream 100 bases:

>100_bases
CCCGCGCGTATCGACCGACCGATCAGGAGAACCCCCACATGTCCCACGATGCCGACGACAAGACCTATCCGTACCGGAAG
GACGACGCGGAGCTGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSFSRSAADPADTLPDLAATLAAPDTHAFLRLGDAFHTRLPAAPLAAPYVVGFSDEVARLLGLPASLAAQPGFAELFAGN
PTRDWPAEALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSE
AMHHLGIPTTRALTVIGSDQPVVREEIETAAVVTRVSESFVRFGHFEHFFSNNRPDLLRALADHVIDRFYPACRDADDPY
LALLEAATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHSDTGGRYAYRMQPRIAHWNCY
CLAQALLPLIGLQHGIADDDARAERAVDDAQAVLATFPERFGPALERAMRAKLGLALERDGDAALANQLLETMHASRADF
TLTFRRLAQLSKHDASRDAPVRDLFIDREAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEK
DFSEVERLAQVLRRPFDEQPEHESYAALPPDWAGSLEVSCSS

Sequences:

>Translated_522_residues
MSFSRSAADPADTLPDLAATLAAPDTHAFLRLGDAFHTRLPAAPLAAPYVVGFSDEVARLLGLPASLAAQPGFAELFAGN
PTRDWPAEALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSE
AMHHLGIPTTRALTVIGSDQPVVREEIETAAVVTRVSESFVRFGHFEHFFSNNRPDLLRALADHVIDRFYPACRDADDPY
LALLEAATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHSDTGGRYAYRMQPRIAHWNCY
CLAQALLPLIGLQHGIADDDARAERAVDDAQAVLATFPERFGPALERAMRAKLGLALERDGDAALANQLLETMHASRADF
TLTFRRLAQLSKHDASRDAPVRDLFIDREAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEK
DFSEVERLAQVLRRPFDEQPEHESYAALPPDWAGSLEVSCSS
>Mature_521_residues
SFSRSAADPADTLPDLAATLAAPDTHAFLRLGDAFHTRLPAAPLAAPYVVGFSDEVARLLGLPASLAAQPGFAELFAGNP
TRDWPAEALPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEA
MHHLGIPTTRALTVIGSDQPVVREEIETAAVVTRVSESFVRFGHFEHFFSNNRPDLLRALADHVIDRFYPACRDADDPYL
ALLEAATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHSDTGGRYAYRMQPRIAHWNCYC
LAQALLPLIGLQHGIADDDARAERAVDDAQAVLATFPERFGPALERAMRAKLGLALERDGDAALANQLLETMHASRADFT
LTFRRLAQLSKHDASRDAPVRDLFIDREAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEKD
FSEVERLAQVLRRPFDEQPEHESYAALPPDWAGSLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=403, Percent_Identity=46.8982630272953, Blast_Score=314, Evalue=2e-85,
Organism=Escherichia coli, GI1787999, Length=492, Percent_Identity=47.9674796747967, Blast_Score=428, Evalue=1e-121,
Organism=Saccharomyces cerevisiae, GI6325034, Length=287, Percent_Identity=39.0243902439024, Blast_Score=193, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 57532; Mature: 57401

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSRSAADPADTLPDLAATLAAPDTHAFLRLGDAFHTRLPAAPLAAPYVVGFSDEVARL
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHH
LGLPASLAAQPGFAELFAGNPTRDWPAEALPYASVYSGHQFGVWAGQLGDGRALTIGELP
HCCCHHHHCCCCHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCEEECCCCCCCEEEECCCC
GTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQ
CCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCC
PVVREEIETAAVVTRVSESFVRFGHFEHFFSNNRPDLLRALADHVIDRFYPACRDADDPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
LALLEAATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCC
DTGGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIADDDARAERAVDDAQAVLATFPER
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FGPALERAMRAKLGLALERDGDAALANQLLETMHASRADFTLTFRRLAQLSKHDASRDAP
HCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
VRDLFIDREAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
DFSEVERLAQVLRRPFDEQPEHESYAALPPDWAGSLEVSCSS
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
SFSRSAADPADTLPDLAATLAAPDTHAFLRLGDAFHTRLPAAPLAAPYVVGFSDEVARL
CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHH
LGLPASLAAQPGFAELFAGNPTRDWPAEALPYASVYSGHQFGVWAGQLGDGRALTIGELP
HCCCHHHHCCCCHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCEEECCCCCCCEEEECCCC
GTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQ
CCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCC
PVVREEIETAAVVTRVSESFVRFGHFEHFFSNNRPDLLRALADHVIDRFYPACRDADDPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
LALLEAATRRTAELVAQWQAVGFCHGVMNTDNMSILGVTIDYGPFGFVDAFDANHICNHS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCC
DTGGRYAYRMQPRIAHWNCYCLAQALLPLIGLQHGIADDDARAERAVDDAQAVLATFPER
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FGPALERAMRAKLGLALERDGDAALANQLLETMHASRADFTLTFRRLAQLSKHDASRDAP
HCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
VRDLFIDREAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
DFSEVERLAQVLRRPFDEQPEHESYAALPPDWAGSLEVSCSS
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA