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The map label for this gene is ydhO [H]

Identifier: 161524391

GI number: 161524391

Start: 1338609

End: 1339283

Strand: Direct

Name: ydhO [H]

Synonym: Bmul_1218

Alternate gene names: 161524391

Gene position: 1338609-1339283 (Clockwise)

Preceding gene: 161524390

Following gene: 161524393

Centisome position: 38.82

GC content: 65.19

Gene sequence:

>675_bases
ATGCAGCATCGATCCCTGACCCAGGCATGCGCGCGCACCCTCGCCGGGCTGTTCATCGGCGCCCTGTTCGCAGCAGCTCC
CGGCGCTTTCGCCGACGAAGTCAGCAGTTTTAACCAAAATGTCACGAATTCGACGCAGATCGGGTCGGGTTCCTCCCTCC
AGCAGGCCAGCGCCCAGCCGTCGAGCGGCGGCGCGAAGTCGTTCCTGTCCGGCATGGCGGGCAAGGCGGGCGACGTCGTC
GTCAGCGCGCTCAACATGATCGGCGTGCGCTACCGCTGGGGCGGCAACTCGCCGGATTCGGGCCTCGACTGCAGCGGCTT
CGTGCGCTACGTGTTCCAGGACACGCTCGGCATGTCGCTGCCGCGTCGCGCGGAAGAGATGAGCCGCGTCGGCGAAAAGG
TAAGCATGAGTAACCTGAAGCCGGGCGACCTCGTGTTCTTCAACACGATGCGCCGCACGTTCTCGCACGTCGGCATCTAT
ATCGGCGACAACAAGTTCGTGCACTCGCCGTCGACGGGCAGCACCGTGCGTGTCGACGATCTCGACAGCAGCTACTGGGA
AAAGCGTTTCACCGGCGCGCGCCGGATCGAGACGCAGTTTCCGATGAAGGCCGACGACCTGCGCCAGCGTGTGCGCGCCA
CGATCGGCACCGACGCGGACAACGCGAACAACTGA

Upstream 100 bases:

>100_bases
TTGAATTTTTTAATTTGTTTTGACAAACGATTACGCGCTGGCTAGTATCGACCGAAATTTTCCGCCAATCAGCTGATTTT
TAAGCAAATTCCATCGACCA

Downstream 100 bases:

>100_bases
CGCGTTCTCGTCCGGGTCGGACGGAATGGACAAGCCCCTGTCGCCGGAAGGCGGCAGGGGCTTTTGTCTTTGCGGCGCGA
CGACGGCGGCGCCGTGCGTT

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQHRSLTQACARTLAGLFIGALFAAAPGAFADEVSSFNQNVTNSTQIGSGSSLQQASAQPSSGGAKSFLSGMAGKAGDVV
VSALNMIGVRYRWGGNSPDSGLDCSGFVRYVFQDTLGMSLPRRAEEMSRVGEKVSMSNLKPGDLVFFNTMRRTFSHVGIY
IGDNKFVHSPSTGSTVRVDDLDSSYWEKRFTGARRIETQFPMKADDLRQRVRATIGTDADNANN

Sequences:

>Translated_224_residues
MQHRSLTQACARTLAGLFIGALFAAAPGAFADEVSSFNQNVTNSTQIGSGSSLQQASAQPSSGGAKSFLSGMAGKAGDVV
VSALNMIGVRYRWGGNSPDSGLDCSGFVRYVFQDTLGMSLPRRAEEMSRVGEKVSMSNLKPGDLVFFNTMRRTFSHVGIY
IGDNKFVHSPSTGSTVRVDDLDSSYWEKRFTGARRIETQFPMKADDLRQRVRATIGTDADNANN
>Mature_224_residues
MQHRSLTQACARTLAGLFIGALFAAAPGAFADEVSSFNQNVTNSTQIGSGSSLQQASAQPSSGGAKSFLSGMAGKAGDVV
VSALNMIGVRYRWGGNSPDSGLDCSGFVRYVFQDTLGMSLPRRAEEMSRVGEKVSMSNLKPGDLVFFNTMRRTFSHVGIY
IGDNKFVHSPSTGSTVRVDDLDSSYWEKRFTGARRIETQFPMKADDLRQRVRATIGTDADNANN

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=128, Percent_Identity=45.3125, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1786421, Length=126, Percent_Identity=42.0634920634921, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788501, Length=109, Percent_Identity=50.4587155963303, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788001, Length=110, Percent_Identity=42.7272727272727, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 24124; Mature: 24124

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHRSLTQACARTLAGLFIGALFAAAPGAFADEVSSFNQNVTNSTQIGSGSSLQQASAQP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
SSGGAKSFLSGMAGKAGDVVVSALNMIGVRYRWGGNSPDSGLDCSGFVRYVFQDTLGMSL
CCCCHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
PRRAEEMSRVGEKVSMSNLKPGDLVFFNTMRRTFSHVGIYIGDNKFVHSPSTGSTVRVDD
CHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCEEECCCEEEECCCCCCEEEEEC
LDSSYWEKRFTGARRIETQFPMKADDLRQRVRATIGTDADNANN
CCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQHRSLTQACARTLAGLFIGALFAAAPGAFADEVSSFNQNVTNSTQIGSGSSLQQASAQP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
SSGGAKSFLSGMAGKAGDVVVSALNMIGVRYRWGGNSPDSGLDCSGFVRYVFQDTLGMSL
CCCCHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
PRRAEEMSRVGEKVSMSNLKPGDLVFFNTMRRTFSHVGIYIGDNKFVHSPSTGSTVRVDD
CHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCEEECCCEEEECCCCCCEEEEEC
LDSSYWEKRFTGARRIETQFPMKADDLRQRVRATIGTDADNANN
CCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]