| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is yejE [H]
Identifier: 161524389
GI number: 161524389
Start: 1335765
End: 1336862
Strand: Direct
Name: yejE [H]
Synonym: Bmul_1216
Alternate gene names: 161524389
Gene position: 1335765-1336862 (Clockwise)
Preceding gene: 161524388
Following gene: 161524390
Centisome position: 38.74
GC content: 67.3
Gene sequence:
>1098_bases ATGAGCCGCGTCGCTGCGCCGTCCCGCGTCGAGGCCGCGCGTGCGCACGTGTCGCCGTCGCCCGCGCGCCGCGTGTGGCA GCGTTTCCGGCAGCAGAAGCTCGGCTACTGGAGCTTCGTGATCTTCGTCGTCGCGTTCGCGGCCAGCATCGCCGCGCCGC TCTGGTCGAACGACAAGCCGCTCGTCGTCCGCTACGACGGTCATTACTATTTCCCGCTGTTCCACGCGTATCCGGAGACG ACATTCGGCGGCGATTTCCCGACGCCCGCCGACTATCTCGATCCGTACGTGCGCAAGCGGCTCGAGGCGCCCGGCAACTT CGTCGTCTATCCGCCGAACCGCTATTACTACGACACGCTGAACTACTTCTCGAAGGAGCCGAATCCGGCGCCGCCGTCGC GCGAGAACTGGCTCGGCACCGACGCGCAGGGCCGCGACCTGTTCGCGCGGCTCGTGTACGGATTCCGCGTGTCGGTCGAG TTCGGGCTGATCCTGACCGCGATCGGCACGCTGCTCGGGATCGCCGCGGGCGCGGTGCAGGGCTTTTTCGGCGGCCGCAT CGACATCGTCGGACAGCGGCTGATCGAGATCTGGAGCTCGCTGCCCGAGCTGTATCTGCTGATCATCTTCGCGTCGATCT TCGAGCCGAGCTTCCTGTTGCTGATCGTGCTGCTGTCGCTGTTCGGCTGGATCGGGCTCGCCGACTACGTGCGCGCGGAA TTCCTGCGCAACCGCACGCAGGACTACGTGCGCGCGGCGCGCGCGATGGGCCTGACGAACTGGCAGATCATCTGGCGCCA CGTGCTGCCGAACAGCCTGACGCCCGTGATCACGTTTCTGCCGTTCCGCATGAGCGGCGCGATTCTCGCGCTCACGAGCC TCGACTTCCTCGGGCTCGGCGTGCCGCCGCCGACGCCGAGCCTCGGCGAGCTGCTTGCGCAGGGCAAGGGCAATCTCGAT GCGTGGTGGATCTCGTTGTCGACGTTCGGCGTGCTGGTCGCGACGCTGCTGCTGCTGACCTTCATGGGCGACGCGCTGCG CAACGCGCTCGACACGCGCATCGCCGATTCGATGCGTGCGGCGGGAGGGCAGCGATGA
Upstream 100 bases:
>100_bases TCAATTCGAAAACCTGGAGCGCTGACTTGAAACCGTCCGTCCGCCTGCCGCGCCGCGGCCCGTTCGTCAGTCCGTGCGCC GCGTCGCGACGAGGTGCGCG
Downstream 100 bases:
>100_bases GCGGCACGACCGTATCGACGCAGGACGAGCCGTTGCTGTCGCTCGAGCATCTGAACGTGCGCTTCGGCGACACGGTCGCC GTCGACGACGTGACGTTCGC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSRVAAPSRVEAARAHVSPSPARRVWQRFRQQKLGYWSFVIFVVAFAASIAAPLWSNDKPLVVRYDGHYYFPLFHAYPET TFGGDFPTPADYLDPYVRKRLEAPGNFVVYPPNRYYYDTLNYFSKEPNPAPPSRENWLGTDAQGRDLFARLVYGFRVSVE FGLILTAIGTLLGIAAGAVQGFFGGRIDIVGQRLIEIWSSLPELYLLIIFASIFEPSFLLLIVLLSLFGWIGLADYVRAE FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLGVPPPTPSLGELLAQGKGNLD AWWISLSTFGVLVATLLLLTFMGDALRNALDTRIADSMRAAGGQR
Sequences:
>Translated_365_residues MSRVAAPSRVEAARAHVSPSPARRVWQRFRQQKLGYWSFVIFVVAFAASIAAPLWSNDKPLVVRYDGHYYFPLFHAYPET TFGGDFPTPADYLDPYVRKRLEAPGNFVVYPPNRYYYDTLNYFSKEPNPAPPSRENWLGTDAQGRDLFARLVYGFRVSVE FGLILTAIGTLLGIAAGAVQGFFGGRIDIVGQRLIEIWSSLPELYLLIIFASIFEPSFLLLIVLLSLFGWIGLADYVRAE FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLGVPPPTPSLGELLAQGKGNLD AWWISLSTFGVLVATLLLLTFMGDALRNALDTRIADSMRAAGGQR >Mature_364_residues SRVAAPSRVEAARAHVSPSPARRVWQRFRQQKLGYWSFVIFVVAFAASIAAPLWSNDKPLVVRYDGHYYFPLFHAYPETT FGGDFPTPADYLDPYVRKRLEAPGNFVVYPPNRYYYDTLNYFSKEPNPAPPSRENWLGTDAQGRDLFARLVYGFRVSVEF GLILTAIGTLLGIAAGAVQGFFGGRIDIVGQRLIEIWSSLPELYLLIIFASIFEPSFLLLIVLLSLFGWIGLADYVRAEF LRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLGVPPPTPSLGELLAQGKGNLDA WWISLSTFGVLVATLLLLTFMGDALRNALDTRIADSMRAAGGQR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4239
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788505, Length=337, Percent_Identity=49.5548961424332, Blast_Score=349, Evalue=2e-97, Organism=Escherichia coli, GI1787054, Length=243, Percent_Identity=29.6296296296296, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI1787760, Length=239, Percent_Identity=33.8912133891213, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1787498, Length=250, Percent_Identity=32.4, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1789964, Length=235, Percent_Identity=34.468085106383, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=26.2222222222222, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787549, Length=248, Percent_Identity=26.6129032258064, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 40805; Mature: 40673
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVAAPSRVEAARAHVSPSPARRVWQRFRQQKLGYWSFVIFVVAFAASIAAPLWSNDKP CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC LVVRYDGHYYFPLFHAYPETTFGGDFPTPADYLDPYVRKRLEAPGNFVVYPPNRYYYDTL EEEEECCEEEEEHHCCCCCCCCCCCCCCCHHHHCHHHHHHHCCCCCEEEECCCCEEHHHH NYFSKEPNPAPPSRENWLGTDAQGRDLFARLVYGFRVSVEFGLILTAIGTLLGIAAGAVQ HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFFGGRIDIVGQRLIEIWSSLPELYLLIIFASIFEPSFLLLIVLLSLFGWIGLADYVRAE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC VPPPTPSLGELLAQGKGNLDAWWISLSTFGVLVATLLLLTFMGDALRNALDTRIADSMRA CCCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGQR CCCCC >Mature Secondary Structure SRVAAPSRVEAARAHVSPSPARRVWQRFRQQKLGYWSFVIFVVAFAASIAAPLWSNDKP CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC LVVRYDGHYYFPLFHAYPETTFGGDFPTPADYLDPYVRKRLEAPGNFVVYPPNRYYYDTL EEEEECCEEEEEHHCCCCCCCCCCCCCCCHHHHCHHHHHHHCCCCCEEEECCCCEEHHHH NYFSKEPNPAPPSRENWLGTDAQGRDLFARLVYGFRVSVEFGLILTAIGTLLGIAAGAVQ HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFFGGRIDIVGQRLIEIWSSLPELYLLIIFASIFEPSFLLLIVLLSLFGWIGLADYVRAE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FLRNRTQDYVRAARAMGLTNWQIIWRHVLPNSLTPVITFLPFRMSGAILALTSLDFLGLG HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC VPPPTPSLGELLAQGKGNLDAWWISLSTFGVLVATLLLLTFMGDALRNALDTRIADSMRA CCCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGQR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]