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The map label for this gene is degU [H]

Identifier: 161524234

GI number: 161524234

Start: 1152673

End: 1153509

Strand: Reverse

Name: degU [H]

Synonym: Bmul_1058

Alternate gene names: 161524234

Gene position: 1153509-1152673 (Counterclockwise)

Preceding gene: 161524235

Following gene: 161524233

Centisome position: 33.45

GC content: 67.62

Gene sequence:

>837_bases
ATGCGGTTCCTGGTGGTCAATTCGGATGCCGAGCGGCGCGACGGGCTGAAAGCCCTGTTGCGGCAGATCGACCGTCACGC
GCGGATCAACGACGCGCCCGACGGTTTCCAGGCGCGCCGCCTGCTGCGCACGCAGCGCTTCGATCTCGTCGCGATCGACT
GGCTGGACGTCGGAAAGGTCAGCGAACTGCAGGCGTTGTGCACCGCCTGTTCGCCGACACCCGTCGCGATGCTGATCGGC
GACACGACCCCGGAAGCGGTTCAAAACTTTTTCGACTACGGCGTCGCGGGCGTGATACCGCATGCCACGCGTCCGCATCT
GCTGGTTCGCGCGCTCGAGATGGTGCTGCTCGGCGGTCACTATATTCCGCCGATCGCCCTGCGTCTGCTGCCTTCGGTAG
CCGTCACCCGTCACGATGCGCGTTTCCAGACGCTTGCGAACGCGCTGCCGCGCCGCTCGCCGGCCGGGCTGCTGTCGCCG
CGACAAGCGCAGATCATGCGCTTCGTCCATATGGGCAGCACGAACAAGATGATCGCGCGCACGCTCGGCATCAGCGAAGG
CACCGTGAAGATCCATCTCGCAAGCATCTTCCAGCAGCTCGGCGCCGCGAACCGCGCCGCCGCGGTCGCCATCTACAACG
GCTGGCTGTCGCCGCATCTCGAGGTGCTGCTGGCAGACCGCGACCGCGCACGCAAGCCTGTGCTCGGCGAACGCGGCCCG
GTCCCGCTGCGCGCACAACGGAACACGCGCCCGTATCCGCTGCCGAACGCGACCGTCGACGATCCGGAACTGCCGCTCGC
CGCCGAGGCGCTGCCCCGTTTCCGGCACAGCCACTAG

Upstream 100 bases:

>100_bases
AAACCATTCAGCCAAGCAGACAACGTGTAAGGTATTTGTCATGATCGGCGCTCGACATACTTGCCGACAGATCAACGACA
CATTCGTAAGGAGGCTGAAT

Downstream 100 bases:

>100_bases
ACGAACAGTCTCGATATTGCGACGGTCGGCGTGTGCGGATTCCCACCTTTGATGCTCAACGAGTAATATGGACGCATGGG
TTTTCTTTTCACACCGCTTC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRFLVVNSDAERRDGLKALLRQIDRHARINDAPDGFQARRLLRTQRFDLVAIDWLDVGKVSELQALCTACSPTPVAMLIG
DTTPEAVQNFFDYGVAGVIPHATRPHLLVRALEMVLLGGHYIPPIALRLLPSVAVTRHDARFQTLANALPRRSPAGLLSP
RQAQIMRFVHMGSTNKMIARTLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLADRDRARKPVLGERGP
VPLRAQRNTRPYPLPNATVDDPELPLAAEALPRFRHSH

Sequences:

>Translated_278_residues
MRFLVVNSDAERRDGLKALLRQIDRHARINDAPDGFQARRLLRTQRFDLVAIDWLDVGKVSELQALCTACSPTPVAMLIG
DTTPEAVQNFFDYGVAGVIPHATRPHLLVRALEMVLLGGHYIPPIALRLLPSVAVTRHDARFQTLANALPRRSPAGLLSP
RQAQIMRFVHMGSTNKMIARTLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLADRDRARKPVLGERGP
VPLRAQRNTRPYPLPNATVDDPELPLAAEALPRFRHSH
>Mature_278_residues
MRFLVVNSDAERRDGLKALLRQIDRHARINDAPDGFQARRLLRTQRFDLVAIDWLDVGKVSELQALCTACSPTPVAMLIG
DTTPEAVQNFFDYGVAGVIPHATRPHLLVRALEMVLLGGHYIPPIALRLLPSVAVTRHDARFQTLANALPRRSPAGLLSP
RQAQIMRFVHMGSTNKMIARTLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLADRDRARKPVLGERGP
VPLRAQRNTRPYPLPNATVDDPELPLAAEALPRFRHSH

Specific function: Regulating factor for the production of extracellular proteases. The N-terminal region acts as an inhibitor, whereas the C-terminal region carries enhancing activity [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 30721; Mature: 30721

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLVVNSDAERRDGLKALLRQIDRHARINDAPDGFQARRLLRTQRFDLVAIDWLDVGKV
CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCH
SELQALCTACSPTPVAMLIGDTTPEAVQNFFDYGVAGVIPHATRPHLLVRALEMVLLGGH
HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCC
YIPPIALRLLPSVAVTRHDARFQTLANALPRRSPAGLLSPRQAQIMRFVHMGSTNKMIAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
TLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLADRDRARKPVLGERGP
HHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCHHCCCCCCCCCCC
VPLRAQRNTRPYPLPNATVDDPELPLAAEALPRFRHSH
CCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRFLVVNSDAERRDGLKALLRQIDRHARINDAPDGFQARRLLRTQRFDLVAIDWLDVGKV
CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCH
SELQALCTACSPTPVAMLIGDTTPEAVQNFFDYGVAGVIPHATRPHLLVRALEMVLLGGH
HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCC
YIPPIALRLLPSVAVTRHDARFQTLANALPRRSPAGLLSPRQAQIMRFVHMGSTNKMIAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
TLGISEGTVKIHLASIFQQLGAANRAAAVAIYNGWLSPHLEVLLADRDRARKPVLGERGP
HHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCHHCCCCCCCCCCC
VPLRAQRNTRPYPLPNATVDDPELPLAAEALPRFRHSH
CCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7765823 [H]