| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161524145
Identifier: 161524145
GI number: 161524145
Start: 1063730
End: 1065070
Strand: Direct
Name: 161524145
Synonym: Bmul_0969
Alternate gene names: NA
Gene position: 1063730-1065070 (Clockwise)
Preceding gene: 161524142
Following gene: 161524146
Centisome position: 30.85
GC content: 60.48
Gene sequence:
>1341_bases ATGAGCATGTTGTTTGACCGTCTGCGGCTTGGCAACCGGTGTCGAAGCGGGTCGCTCTACGGCCTTGCATCCGGTCGCCG GTGGGACGATCTCGTGGCGGTGCTGGCAGCGGGATTAGGAGTAGCTGGATATCTCAGTTGGCGTGGCGCAACCAATGCCG CCCTATTTGTCTTATTGCTGTTGGCATTGCTGAACAGTCCTGCGTGGTGGGCCAACGCACGTGACCAGTGGCGTCGCTTC GTACCGCTGTGGATCGCGCTCGCCGCACCAATCGTGGCGCTAGCGATTGGTCAGCTGTTTCGACAAGAGTGGATTCCGAA GGCGTTCGACGCGCCCCTTCGAATGCTGCTCGCAATCCCTGTCCTCCTGTACTTTCATCAGCGTCGCATCGACTTTGCGC GTATCGTCGGCTACGCGGCGCCGCTCTGCCTGTTCGCGATGCTCGCGGAGGTCTGGTTGGACCCGGCGGCGTCCGGGCAG TGGGGAGGGCGCTATGCAACTTATTTCGTCGACACCGATACCTTCGGTGTATACGGCCTGGTGTTGACCGGTTTTTGCTT GTTCAGCCTCCGCATTGCACCGAACGGCGGGAGTAAGATTTCGGCGGCGTGGCAGTTGTTCGGCGCGCTCGTCGGTATCG TGCTGATAATCGGTTCCGGTACACGCACGGCGTGGTATGCAGTACCGGTGGTGTTTGCGCTGTGGCTGTGGCTGAACCGG CGTTCCGCTAGGCTGCGATGGCTGCTGGTCTGTATCGCGGTACTGGCAGCCGTGCTGGTTCTCGATCGTGAAATCGCCGC GCGGCTCCTCAGTGGTTACCACGAGATTCACCAGTGGCTCGTTGGTACGCGCCGAGACACGTCTGCTGGCTTGCGTCTGA CGATGTGGCACATGTCGTGGGAATTGTTCAAGCACCGTCCGTGGGGCGGCTATGGCGATACCGGCTATCTCGCATTCCTC GATCAGCCTTGGATCGCGTCGATTGCACCGATATCGCAGGCAATGGCGATCGAGCACGGCCCGCATAACGAATTGTTGGC GAACTTACTGCGCTCCGGAGTGGGGGGCGGTGTCGCGGTTCTGTGCCAATTTCTGATTCCGCTGATGTTCTTCGCGCGTC GATGCTACGCCGCCGACGATGCCGTGAAGGAGGCGAGTCGGCTGGGCTTGATTTACATCGTATGCGTGATCGTGATGAGT GTCGGCTTCGAGATGTTCACGCTGAAATATACGGCGTCGTTCTATGGACTGGTGATTGCGTGTCTGGGGGCTCAGGTACT GGCGGGCGAGGGCACGGCGGGGCAGGCAGCCCCGACTACCAACAAGGCTGCACACGGATGA
Upstream 100 bases:
>100_bases TGCGGTCGACCCGCGCGACGCATGGCCACGTTGCGGGAGAGTCCGTATGCTATCCTTCGGCGAATGATTTTAGGCAATAT TTTTGCGATATCCGAAACCA
Downstream 100 bases:
>100_bases ATCGATACACCAAAGTGAGAGTCGTTTGCCCGGGGGGCGCGATGACAGCCGGCCCCGAGGCGCTGCATCAGCTCGTCGCG GAATTGAACCGGCTCGGCCA
Product: O-antigen polymerase
Products: NA
Alternate protein names: Lipopolysaccharide O-Antigen Ligase Transmembrane Protein; Lipopolysaccharide Transmembrane Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSMLFDRLRLGNRCRSGSLYGLASGRRWDDLVAVLAAGLGVAGYLSWRGATNAALFVLLLLALLNSPAWWANARDQWRRF VPLWIALAAPIVALAIGQLFRQEWIPKAFDAPLRMLLAIPVLLYFHQRRIDFARIVGYAAPLCLFAMLAEVWLDPAASGQ WGGRYATYFVDTDTFGVYGLVLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWYAVPVVFALWLWLNR RSARLRWLLVCIAVLAAVLVLDREIAARLLSGYHEIHQWLVGTRRDTSAGLRLTMWHMSWELFKHRPWGGYGDTGYLAFL DQPWIASIAPISQAMAIEHGPHNELLANLLRSGVGGGVAVLCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMS VGFEMFTLKYTASFYGLVIACLGAQVLAGEGTAGQAAPTTNKAAHG
Sequences:
>Translated_446_residues MSMLFDRLRLGNRCRSGSLYGLASGRRWDDLVAVLAAGLGVAGYLSWRGATNAALFVLLLLALLNSPAWWANARDQWRRF VPLWIALAAPIVALAIGQLFRQEWIPKAFDAPLRMLLAIPVLLYFHQRRIDFARIVGYAAPLCLFAMLAEVWLDPAASGQ WGGRYATYFVDTDTFGVYGLVLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWYAVPVVFALWLWLNR RSARLRWLLVCIAVLAAVLVLDREIAARLLSGYHEIHQWLVGTRRDTSAGLRLTMWHMSWELFKHRPWGGYGDTGYLAFL DQPWIASIAPISQAMAIEHGPHNELLANLLRSGVGGGVAVLCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMS VGFEMFTLKYTASFYGLVIACLGAQVLAGEGTAGQAAPTTNKAAHG >Mature_445_residues SMLFDRLRLGNRCRSGSLYGLASGRRWDDLVAVLAAGLGVAGYLSWRGATNAALFVLLLLALLNSPAWWANARDQWRRFV PLWIALAAPIVALAIGQLFRQEWIPKAFDAPLRMLLAIPVLLYFHQRRIDFARIVGYAAPLCLFAMLAEVWLDPAASGQW GGRYATYFVDTDTFGVYGLVLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWYAVPVVFALWLWLNRR SARLRWLLVCIAVLAAVLVLDREIAARLLSGYHEIHQWLVGTRRDTSAGLRLTMWHMSWELFKHRPWGGYGDTGYLAFLD QPWIASIAPISQAMAIEHGPHNELLANLLRSGVGGGVAVLCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMSV GFEMFTLKYTASFYGLVIACLGAQVLAGEGTAGQAAPTTNKAAHG
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49056; Mature: 48925
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLFDRLRLGNRCRSGSLYGLASGRRWDDLVAVLAAGLGVAGYLSWRGATNAALFVLLL CCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH LALLNSPAWWANARDQWRRFVPLWIALAAPIVALAIGQLFRQEWIPKAFDAPLRMLLAIP HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLLYFHQRRIDFARIVGYAAPLCLFAMLAEVWLDPAASGQWGGRYATYFVDTDTFGVYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHH VLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWYAVPVVFALWLWLNR HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC RSARLRWLLVCIAVLAAVLVLDREIAARLLSGYHEIHQWLVGTRRDTSAGLRLTMWHMSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHH ELFKHRPWGGYGDTGYLAFLDQPWIASIAPISQAMAIEHGPHNELLANLLRSGVGGGVAV HHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH LCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMSVGFEMFTLKYTASFYGLVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH CLGAQVLAGEGTAGQAAPTTNKAAHG HHCCHHEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMLFDRLRLGNRCRSGSLYGLASGRRWDDLVAVLAAGLGVAGYLSWRGATNAALFVLLL CHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH LALLNSPAWWANARDQWRRFVPLWIALAAPIVALAIGQLFRQEWIPKAFDAPLRMLLAIP HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLLYFHQRRIDFARIVGYAAPLCLFAMLAEVWLDPAASGQWGGRYATYFVDTDTFGVYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHH VLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWYAVPVVFALWLWLNR HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC RSARLRWLLVCIAVLAAVLVLDREIAARLLSGYHEIHQWLVGTRRDTSAGLRLTMWHMSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHH ELFKHRPWGGYGDTGYLAFLDQPWIASIAPISQAMAIEHGPHNELLANLLRSGVGGGVAV HHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH LCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMSVGFEMFTLKYTASFYGLVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH CLGAQVLAGEGTAGQAAPTTNKAAHG HHCCHHEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA