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The map label for this gene is yodF [H]

Identifier: 161524116

GI number: 161524116

Start: 1026965

End: 1028515

Strand: Direct

Name: yodF [H]

Synonym: Bmul_0940

Alternate gene names: 161524116

Gene position: 1026965-1028515 (Clockwise)

Preceding gene: 161524115

Following gene: 161524122

Centisome position: 29.78

GC content: 65.76

Gene sequence:

>1551_bases
ATGAATCTCGGCGCGACTTTCGTCTTCGTTCTCCTTTTCATCGGCGTCACGATCATGGGCTTCCTCGCCGCCAACTGGCG
GCGCGGCGACCTCGCCCATCTCGACGAGTGGGGGCTCGGCGGCCGGCGCTTCGGCACGATCGTCACCTGGTTCCTGCTCG
GCGGCGACCTGTACACAGCGTACACGTTCGTCGCGGTGCCCGCGCTCGTGTTCGGTGCCGGCGCGATGGGCTTCTTCGCG
CTGCCGTACACGATCCTCATCTATCCGTTCGCGTTCGTCGTCTTTCCCAAACTGTGGAGCATCGCGAAGCGGCACGGCTA
CGTGACGGCCGCCGATTTCGTCAACGCCCGCTACGGCAGCCGCATGCTCGCGCTCGCGATCGCCGTGACCGGCATCGTCG
CGACGATGCCGTACATCGCGCTGCAACTGGTCGGCATCGAGGTCGTGATCGGCGCGCTCGGGTTCGACACGACGGGCTTC
GTCGGCGATCTGCCACTGATCATCGCGTTCGCGATCCTCGCCGCGTACACGTACACGTCGGGGTTGCGCGCGCCCGCGAT
GATCGCGATCGTGAAGGACGTGCTGATCTACATCACGATCGCCGCCGCGATCATCGTGATCCCTGCGAAGCTCGGCGGCT
TCGGGCATATCTTCGCGAGCGTGCCGCCCGCGAAGCTGCTGCTGAAGGCGCCCGACGCGACGAGCCTGAACGGCTACAGC
GCCTACGCGACGCTCGCGATCGGCTCGGCGCTCGCGCTGTTCCTCTATCCGCATTCGGTCACCGCGATCCTGTCGTCGTC
GTCGGGCAACACGATCCGCCGCAACATGGCGATGCTGCCGGCCTATTCGTTCGTGCTCGGCCTGCTCGCGCTGCTCGGCT
ACATGGCGCTCGCGTCGGGCGTGAAGGACATGCCGCAGTACGCGCCGTACTTCAAGGCGTTCGGCCCGAACTTCGCGGTG
CCCGCGCTGTTCCTGAACTACTTCCCGTCGTGGTTCGTCGGCGTCGCGTTCGCGGCGATCGGGATCGGCGCGCTGGTGCC
GGCGGCGATCATGTCGATCGCGGCCGCGAACCTGTACACGCGCAACATCCACCGCGAGTTCGTCAACCGCAACATGACGC
ACGACCAGGAAACGCACGTCGCGAAGCTCGTGTCGCTGATCGTGAAGATCGGCGCGGTGGCATTCATTCTCGGGCTGCCG
CTCACGTACGCGATCCAGCTGCAACTGCTCGGCGGGATCTGGATCATCCAGACGCTGCCGGCGATCGTGCTCGGGCTCTA
CACGCGCGTGCTCGATCATCGCGGGCTGCTGGTCGGCTGGGCGGCCGGGATCGTCTGCGGCACGTGGATGGCGATCTCGC
TGAAGTTGGCCGGCTCGATCTTCACGATTCACCTGTTCGGCCTCGCGATTCCCGGCTATGCGGCGGTGTGGTCGCTGATC
GTCAACCTCGTCGTGTCGATCGTGGTCAGCGTGCTCGTGCGCGTGATGGGGATGGCGCATGCGGAAGATCGCACGCGGCC
GGAAGACTATCTCGACGTCGTCGAAAGCTGA

Upstream 100 bases:

>100_bases
TCTACTGGTACCAGCTGCTCTGGGTGTTCATTAGCGCGGTGATCACCGCCTTCGTGTACTACAAGACCAAGAACGCGTGG
AAAACGCCGGGAGGTGTGCA

Downstream 100 bases:

>100_bases
ACGCGGCGGCGCGACCGCGCGTCGCCGGTCGAGCATGCCGCAATGAAAACGCCCGCCGCTGCGAAGCGGCGGGCGTTTCA
CGTTGTATCGGCGCGTCTCG

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MNLGATFVFVLLFIGVTIMGFLAANWRRGDLAHLDEWGLGGRRFGTIVTWFLLGGDLYTAYTFVAVPALVFGAGAMGFFA
LPYTILIYPFAFVVFPKLWSIAKRHGYVTAADFVNARYGSRMLALAIAVTGIVATMPYIALQLVGIEVVIGALGFDTTGF
VGDLPLIIAFAILAAYTYTSGLRAPAMIAIVKDVLIYITIAAAIIVIPAKLGGFGHIFASVPPAKLLLKAPDATSLNGYS
AYATLAIGSALALFLYPHSVTAILSSSSGNTIRRNMAMLPAYSFVLGLLALLGYMALASGVKDMPQYAPYFKAFGPNFAV
PALFLNYFPSWFVGVAFAAIGIGALVPAAIMSIAAANLYTRNIHREFVNRNMTHDQETHVAKLVSLIVKIGAVAFILGLP
LTYAIQLQLLGGIWIIQTLPAIVLGLYTRVLDHRGLLVGWAAGIVCGTWMAISLKLAGSIFTIHLFGLAIPGYAAVWSLI
VNLVVSIVVSVLVRVMGMAHAEDRTRPEDYLDVVES

Sequences:

>Translated_516_residues
MNLGATFVFVLLFIGVTIMGFLAANWRRGDLAHLDEWGLGGRRFGTIVTWFLLGGDLYTAYTFVAVPALVFGAGAMGFFA
LPYTILIYPFAFVVFPKLWSIAKRHGYVTAADFVNARYGSRMLALAIAVTGIVATMPYIALQLVGIEVVIGALGFDTTGF
VGDLPLIIAFAILAAYTYTSGLRAPAMIAIVKDVLIYITIAAAIIVIPAKLGGFGHIFASVPPAKLLLKAPDATSLNGYS
AYATLAIGSALALFLYPHSVTAILSSSSGNTIRRNMAMLPAYSFVLGLLALLGYMALASGVKDMPQYAPYFKAFGPNFAV
PALFLNYFPSWFVGVAFAAIGIGALVPAAIMSIAAANLYTRNIHREFVNRNMTHDQETHVAKLVSLIVKIGAVAFILGLP
LTYAIQLQLLGGIWIIQTLPAIVLGLYTRVLDHRGLLVGWAAGIVCGTWMAISLKLAGSIFTIHLFGLAIPGYAAVWSLI
VNLVVSIVVSVLVRVMGMAHAEDRTRPEDYLDVVES
>Mature_516_residues
MNLGATFVFVLLFIGVTIMGFLAANWRRGDLAHLDEWGLGGRRFGTIVTWFLLGGDLYTAYTFVAVPALVFGAGAMGFFA
LPYTILIYPFAFVVFPKLWSIAKRHGYVTAADFVNARYGSRMLALAIAVTGIVATMPYIALQLVGIEVVIGALGFDTTGF
VGDLPLIIAFAILAAYTYTSGLRAPAMIAIVKDVLIYITIAAAIIVIPAKLGGFGHIFASVPPAKLLLKAPDATSLNGYS
AYATLAIGSALALFLYPHSVTAILSSSSGNTIRRNMAMLPAYSFVLGLLALLGYMALASGVKDMPQYAPYFKAFGPNFAV
PALFLNYFPSWFVGVAFAAIGIGALVPAAIMSIAAANLYTRNIHREFVNRNMTHDQETHVAKLVSLIVKIGAVAFILGLP
LTYAIQLQLLGGIWIIQTLPAIVLGLYTRVLDHRGLLVGWAAGIVCGTWMAISLKLAGSIFTIHLFGLAIPGYAAVWSLI
VNLVVSIVVSVLVRVMGMAHAEDRTRPEDYLDVVES

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 55199; Mature: 55199

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLGATFVFVLLFIGVTIMGFLAANWRRGDLAHLDEWGLGGRRFGTIVTWFLLGGDLYTA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHH
YTFVAVPALVFGAGAMGFFALPYTILIYPFAFVVFPKLWSIAKRHGYVTAADFVNARYGS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH
RMLALAIAVTGIVATMPYIALQLVGIEVVIGALGFDTTGFVGDLPLIIAFAILAAYTYTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
GLRAPAMIAIVKDVLIYITIAAAIIVIPAKLGGFGHIFASVPPAKLLLKAPDATSLNGYS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHEEECCCCCCCCCCH
AYATLAIGSALALFLYPHSVTAILSSSSGNTIRRNMAMLPAYSFVLGLLALLGYMALASG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDMPQYAPYFKAFGPNFAVPALFLNYFPSWFVGVAFAAIGIGALVPAAIMSIAAANLYT
HHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNIHREFVNRNMTHDQETHVAKLVSLIVKIGAVAFILGLPLTYAIQLQLLGGIWIIQTLP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AIVLGLYTRVLDHRGLLVGWAAGIVCGTWMAISLKLAGSIFTIHLFGLAIPGYAAVWSLI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VNLVVSIVVSVLVRVMGMAHAEDRTRPEDYLDVVES
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNLGATFVFVLLFIGVTIMGFLAANWRRGDLAHLDEWGLGGRRFGTIVTWFLLGGDLYTA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHH
YTFVAVPALVFGAGAMGFFALPYTILIYPFAFVVFPKLWSIAKRHGYVTAADFVNARYGS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH
RMLALAIAVTGIVATMPYIALQLVGIEVVIGALGFDTTGFVGDLPLIIAFAILAAYTYTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
GLRAPAMIAIVKDVLIYITIAAAIIVIPAKLGGFGHIFASVPPAKLLLKAPDATSLNGYS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHEEECCCCCCCCCCH
AYATLAIGSALALFLYPHSVTAILSSSSGNTIRRNMAMLPAYSFVLGLLALLGYMALASG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKDMPQYAPYFKAFGPNFAVPALFLNYFPSWFVGVAFAAIGIGALVPAAIMSIAAANLYT
HHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNIHREFVNRNMTHDQETHVAKLVSLIVKIGAVAFILGLPLTYAIQLQLLGGIWIIQTLP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AIVLGLYTRVLDHRGLLVGWAAGIVCGTWMAISLKLAGSIFTIHLFGLAIPGYAAVWSLI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VNLVVSIVVSVLVRVMGMAHAEDRTRPEDYLDVVES
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]