| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is 161523720
Identifier: 161523720
GI number: 161523720
Start: 590408
End: 591184
Strand: Direct
Name: 161523720
Synonym: Bmul_0540
Alternate gene names: NA
Gene position: 590408-591184 (Clockwise)
Preceding gene: 161523719
Following gene: 161523721
Centisome position: 17.12
GC content: 70.27
Gene sequence:
>777_bases ATGACGCGAAATAGGCGCACGCCGGGCTGGCCCGGCATGCTGCTGCCGCGCGCATTCTTCGATCGCGCCGCGCCTGCGGT CGCGCCGTTGCTGCTGAACAAGATTCTCGCGTCCGCGGACGGTCGTGCAGGGCGGATCGTCGAAGTGGAGGCCTATGCCG GCGCGATCGACCCGGCCGCGCACACCTATCGCGGCAAGACGCCGCGCAACGCGACGATGTTCGGGCCGCCCGGGCACATG TACGTGTATTTCACGTACGGGATGCACTGGTGCTGCAATTGCGTCTGCGGCCCGGACGGCGCCGGCACCGGTGTGCTGAT CCGGGCGCTCGAACCGCTGTCCGGTATCGAGCGGATGCGCGCCGCGCGTCCGCCGCAGACGCGCGATCGCGATCTATGTC GCGGCCCGGCGCGGCTCACGCAGGCGATGGGCATCACCGGCGCACAGGACGGCGCCGACCTCGTGCGCGCGTGCGACGGC TTCGCGATCGTCGACGACGGCACGGCGCCGCCGGCGCGCGCGAAGGGCGGCCCGCGCATCGGTATCCGCGTCGGCACCGA TCTGCCGTGGCGATGGAGTGTGCCCGGCAATCCTTACGTATCGGGGCCGCGTGCGCGAGCGGTAGGTGGCACGCGGCGCG CATGCCGCGCACATCGGCGATGCGACTCTCATGCAGCGCGCACGTATAGCATCGGCAATTGCAGGCAACATGACCGGCGT CGGGCTCATCGGCCGCATCGGGCTCATCAGCCGCATCCGCATCATCGGCTGCATTAG
Upstream 100 bases:
>100_bases TCCAGGATCAATCCGCACATGGCGGCCGCCGCGACCGGATGCCCGTCTTCTGCTTCGCATGGCGGCGCTCGGCGCTGCCG CCATCGACCGGAGCTACCTC
Downstream 100 bases:
>100_bases CGGCATTGGCCGCATCTTCCAACCCACACCCCGCGCCGCATTCACGCAATCGCCATAATCGCGTGCGTATGCTGTCCGTT TTGATAGCTCGATCGACAGG
Product: 3-methyladenine DNA glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTRNRRTPGWPGMLLPRAFFDRAAPAVAPLLLNKILASADGRAGRIVEVEAYAGAIDPAAHTYRGKTPRNATMFGPPGHM YVYFTYGMHWCCNCVCGPDGAGTGVLIRALEPLSGIERMRAARPPQTRDRDLCRGPARLTQAMGITGAQDGADLVRACDG FAIVDDGTAPPARAKGGPRIGIRVGTDLPWRWSVPGNPYVSGPRARAVGGTRRACRAHRRCDSHAARTYSIGNCRQHDRR RAHRPHRAHQPHPHHRLH
Sequences:
>Translated_258_residues MTRNRRTPGWPGMLLPRAFFDRAAPAVAPLLLNKILASADGRAGRIVEVEAYAGAIDPAAHTYRGKTPRNATMFGPPGHM YVYFTYGMHWCCNCVCGPDGAGTGVLIRALEPLSGIERMRAARPPQTRDRDLCRGPARLTQAMGITGAQDGADLVRACDG FAIVDDGTAPPARAKGGPRIGIRVGTDLPWRWSVPGNPYVSGPRARAVGGTRRACRAHRRCDSHAARTYSIGNCRQHDRR RAHRPHRAHQPHPHHRLH >Mature_257_residues TRNRRTPGWPGMLLPRAFFDRAAPAVAPLLLNKILASADGRAGRIVEVEAYAGAIDPAAHTYRGKTPRNATMFGPPGHMY VYFTYGMHWCCNCVCGPDGAGTGVLIRALEPLSGIERMRAARPPQTRDRDLCRGPARLTQAMGITGAQDGADLVRACDGF AIVDDGTAPPARAKGGPRIGIRVGTDLPWRWSVPGNPYVSGPRARAVGGTRRACRAHRRCDSHAARTYSIGNCRQHDRRR AHRPHRAHQPHPHHRLH
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
Organism=Homo sapiens, GI62632769, Length=151, Percent_Identity=43.7086092715232, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI62632771, Length=151, Percent_Identity=43.7086092715232, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI62632765, Length=151, Percent_Identity=43.7086092715232, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: 3.2.2.-
Molecular weight: Translated: 28204; Mature: 28072
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNRRTPGWPGMLLPRAFFDRAAPAVAPLLLNKILASADGRAGRIVEVEAYAGAIDPAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCHH HTYRGKTPRNATMFGPPGHMYVYFTYGMHWCCNCVCGPDGAGTGVLIRALEPLSGIERMR HHCCCCCCCCCEEECCCCCEEEEEECCHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHH AARPPQTRDRDLCRGPARLTQAMGITGAQDGADLVRACDGFAIVDDGTAPPARAKGGPRI HCCCCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCEE GIRVGTDLPWRWSVPGNPYVSGPRARAVGGTRRACRAHRRCDSHAARTYSIGNCRQHDRR EEEECCCCCEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHH RAHRPHRAHQPHPHHRLH HHCCCCCCCCCCCCCCCC >Mature Secondary Structure TRNRRTPGWPGMLLPRAFFDRAAPAVAPLLLNKILASADGRAGRIVEVEAYAGAIDPAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCHH HTYRGKTPRNATMFGPPGHMYVYFTYGMHWCCNCVCGPDGAGTGVLIRALEPLSGIERMR HHCCCCCCCCCEEECCCCCEEEEEECCHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHH AARPPQTRDRDLCRGPARLTQAMGITGAQDGADLVRACDGFAIVDDGTAPPARAKGGPRI HCCCCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCEE GIRVGTDLPWRWSVPGNPYVSGPRARAVGGTRRACRAHRRCDSHAARTYSIGNCRQHDRR EEEECCCCCEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHH RAHRPHRAHQPHPHHRLH HHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA