Click here to switch to the map view.

The map label for this gene is rhsE [H]

Identifier: 161523535

GI number: 161523535

Start: 387305

End: 388549

Strand: Direct

Name: rhsE [H]

Synonym: Bmul_0355

Alternate gene names: 161523535

Gene position: 387305-388549 (Clockwise)

Preceding gene: 161523534

Following gene: 161523537

Centisome position: 11.23

GC content: 62.09

Gene sequence:

>1245_bases
TTGCCTTGTTGGAAAACGAGGAGACGACGTTTTCGGTCGTGGCGAGGACAATCGATAGGTTGCCTGCAAACATCGCCGGT
CTCACGACCGGTCGAGCGACATGCCTTCGTTGCGATCGAGCCCGGCGCGACCGGAAAATGCGTTGCCGACAGATGGGCCC
GCGGTCCGGGGTTAGCTTCTGAAGGCGTATGCGGAGACACTTCGAGCCCGGTGCGGCCGGACAGCACGTTACCGCCGGAG
GTGCCAAAGGTGCTCGGCAACCTGCTGAAGGCGTATGCGGGGATGCACTTCGAGTACGACGCGCGGGGTAACCTCGTACG
CAAGCGTACGCCGGCGGGCGAGCAGGAATACGAGTGGGATGCGTTCAACCGTTTGCTGTCGGCGCGCGTTGCGGAGACGT
CGCGGCAGAGCGAGGCGCGGTACTTTTACGACGCGTTCGGCCGCCGGATCGCGAAGGAGGTGAACGGCGAGCGCACGGTG
TTCGGATGGGATGGCGACACGCTCGCGTACGAAAGCGATGGCGAGCGCGGCACGCACTATATCTACGAGCCGGGGACGTT
CGTGCCGCTCGCGCAGTATGTGGCCGAGCCGGTTGTCGGAATCGAGACGCCGGAGTGGAAGAGCAGCGATCGGTACGTGC
CGGAGGACGATCCGCTACAGAAGGTGCCGCAGCGGCGCGCAGACGCGAAGCTTTTCTATTACCACTGCGACCAGATCGGC
ACGCCGCAGTTGCTGACGGACGACGATGGGGATGTTGTGTGGGAAGCATCGTACAAGGCGTGGGGCGAAGCGCGGGAGGT
GATCGCGCGGGCGTCGAAGGCGGCGGGGATCGTGGCGAGGAATTCGTTGCGGTTTCAGGGGCAGCAGGAGGATGAGGAGA
CGGGGCTGCATTACAACCGGCATCGGCACTATGATCCGCAACTCGGCAGGTTCACCAGCAGAGATCCCATCGGGCTTAAC
GGTGGGATAAACGTGTTTCGATACGCACCCAACCCTGTGGGGTGGGTTGATCCGCTCGGTTTGACGTGCTGCGATTGTTT
GTATACGGGGGTGAGCGCCAATCACCCAGCAATTGACGACGCGAAAAGAGGAATCGTCCGGCCGGCGGATCCTTCCGCGA
CTCTCACACCGGAGCACTATGCAGAAGGCGGATTGACGGGGCAAAGTCAATTTGCTTCCTGGACCCCAATAAGGATCTGG
CTTTGCAGCATGCCAATAAAGATGGTCCGGGCGGGGCGTTGTTGA

Upstream 100 bases:

>100_bases
CGCATATGCGCCCTGCTTTTTTTAGAGTGCAAAGTCGATAATCGAACGGCGCGAAATGCTGCTGCCGTGACGAAGGATAG
GGAAAAGGACCATACATCGA

Downstream 100 bases:

>100_bases
CGGTTCCGAGAGGAGCGCCTGCCGCGGGAGATTCCTGGGCATGGGGGGGACGCATATCAATGATTGGGGCGAGGTCGAAA
TGTTCCAGACGGGCACCCGT

Product: YD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MPCWKTRRRRFRSWRGQSIGCLQTSPVSRPVERHAFVAIEPGATGKCVADRWARGPGLASEGVCGDTSSPVRPDSTLPPE
VPKVLGNLLKAYAGMHFEYDARGNLVRKRTPAGEQEYEWDAFNRLLSARVAETSRQSEARYFYDAFGRRIAKEVNGERTV
FGWDGDTLAYESDGERGTHYIYEPGTFVPLAQYVAEPVVGIETPEWKSSDRYVPEDDPLQKVPQRRADAKLFYYHCDQIG
TPQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQEDEETGLHYNRHRHYDPQLGRFTSRDPIGLN
GGINVFRYAPNPVGWVDPLGLTCCDCLYTGVSANHPAIDDAKRGIVRPADPSATLTPEHYAEGGLTGQSQFASWTPIRIW
LCSMPIKMVRAGRC

Sequences:

>Translated_414_residues
MPCWKTRRRRFRSWRGQSIGCLQTSPVSRPVERHAFVAIEPGATGKCVADRWARGPGLASEGVCGDTSSPVRPDSTLPPE
VPKVLGNLLKAYAGMHFEYDARGNLVRKRTPAGEQEYEWDAFNRLLSARVAETSRQSEARYFYDAFGRRIAKEVNGERTV
FGWDGDTLAYESDGERGTHYIYEPGTFVPLAQYVAEPVVGIETPEWKSSDRYVPEDDPLQKVPQRRADAKLFYYHCDQIG
TPQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQEDEETGLHYNRHRHYDPQLGRFTSRDPIGLN
GGINVFRYAPNPVGWVDPLGLTCCDCLYTGVSANHPAIDDAKRGIVRPADPSATLTPEHYAEGGLTGQSQFASWTPIRIW
LCSMPIKMVRAGRC
>Mature_413_residues
PCWKTRRRRFRSWRGQSIGCLQTSPVSRPVERHAFVAIEPGATGKCVADRWARGPGLASEGVCGDTSSPVRPDSTLPPEV
PKVLGNLLKAYAGMHFEYDARGNLVRKRTPAGEQEYEWDAFNRLLSARVAETSRQSEARYFYDAFGRRIAKEVNGERTVF
GWDGDTLAYESDGERGTHYIYEPGTFVPLAQYVAEPVVGIETPEWKSSDRYVPEDDPLQKVPQRRADAKLFYYHCDQIGT
PQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQEDEETGLHYNRHRHYDPQLGRFTSRDPIGLNG
GINVFRYAPNPVGWVDPLGLTCCDCLYTGVSANHPAIDDAKRGIVRPADPSATLTPEHYAEGGLTGQSQFASWTPIRIWL
CSMPIKMVRAGRC

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786706, Length=345, Percent_Identity=30.1449275362319, Blast_Score=131, Evalue=7e-32,
Organism=Escherichia coli, GI1786917, Length=349, Percent_Identity=29.2263610315186, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI48994942, Length=358, Percent_Identity=29.608938547486, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1790020, Length=345, Percent_Identity=30.4347826086957, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 46318; Mature: 46187

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCWKTRRRRFRSWRGQSIGCLQTSPVSRPVERHAFVAIEPGATGKCVADRWARGPGLAS
CCCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCEEEEECCCCCCCHHHHHHCCCCCCCC
EGVCGDTSSPVRPDSTLPPEVPKVLGNLLKAYAGMHFEYDARGNLVRKRTPAGEQEYEWD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCHH
AFNRLLSARVAETSRQSEARYFYDAFGRRIAKEVNGERTVFGWDGDTLAYESDGERGTHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCEE
IYEPGTFVPLAQYVAEPVVGIETPEWKSSDRYVPEDDPLQKVPQRRADAKLFYYHCDQIG
EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC
TPQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQEDEETGLHYNR
CCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCEEEECCEECCCCCCHHHCCCCCCC
HRHYDPQLGRFTSRDPIGLNGGINVFRYAPNPVGWVDPLGLTCCDCLYTGVSANHPAIDD
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH
AKRGIVRPADPSATLTPEHYAEGGLTGQSQFASWTPIRIWLCSMPIKMVRAGRC
HHCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCEEEEEECCCHHHHHCCCC
>Mature Secondary Structure 
PCWKTRRRRFRSWRGQSIGCLQTSPVSRPVERHAFVAIEPGATGKCVADRWARGPGLAS
CCHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCEEEEECCCCCCCHHHHHHCCCCCCCC
EGVCGDTSSPVRPDSTLPPEVPKVLGNLLKAYAGMHFEYDARGNLVRKRTPAGEQEYEWD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCHH
AFNRLLSARVAETSRQSEARYFYDAFGRRIAKEVNGERTVFGWDGDTLAYESDGERGTHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCEE
IYEPGTFVPLAQYVAEPVVGIETPEWKSSDRYVPEDDPLQKVPQRRADAKLFYYHCDQIG
EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC
TPQLLTDDDGDVVWEASYKAWGEAREVIARASKAAGIVARNSLRFQGQQEDEETGLHYNR
CCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCEEEECCEECCCCCCHHHCCCCCCC
HRHYDPQLGRFTSRDPIGLNGGINVFRYAPNPVGWVDPLGLTCCDCLYTGVSANHPAIDD
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH
AKRGIVRPADPSATLTPEHYAEGGLTGQSQFASWTPIRIWLCSMPIKMVRAGRC
HHCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCCCCCEEEEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1766878; 7934896 [H]