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The map label for this gene is 161523488

Identifier: 161523488

GI number: 161523488

Start: 341068

End: 341643

Strand: Direct

Name: 161523488

Synonym: Bmul_0308

Alternate gene names: NA

Gene position: 341068-341643 (Clockwise)

Preceding gene: 161523487

Following gene: 161523493

Centisome position: 9.89

GC content: 75.35

Gene sequence:

>576_bases
ATGAACGGCGACCGGCTGCGCGTGTTCGTCGCGCTGATGCCCGATGCGGCATCGCGCGATGCGCTGCACGCGTTGCCGGT
CACACGCGGCGCGCGGCGCACGCTCGCCGCGCAATTGCACGTGACGCTCGCGTTCATCGGCGCGATCGAGCGCGATCGAT
GCGACGCGCTCGCGGCGCGTCTGCCGGTGCTGGCCGCCGCGCATCCGCTGCCGCCGCAGCCGGTCGAGCGCATCGCGTGG
TGGCCGAGCCTGCCGCGGGCGCGGCTGATCGTCGCCGAACTCGCGCGCGAGCCTGCCTGTGCGGCGCTCAACGCGGCGCT
GGCGGCGTCGCTCGCCGAACTGGGCCTGCCGGCCGATCCGCGTCCGTTCCGGCCGCACGTGACGCTCGCGCGATTGCCGC
GCGATGCGGTCGGGCAGCCGGCGCACGGCGGCGCGCCGGGGCGGCCGGTCGCGCTGCGCTTCGACGCGCTGACGCTGTTC
GAAAGCCGGCTGTCGCACGAAGGCGTATCGCATCGGCCGATCGTGTCGGCGCCGATCGCCTGCCTCGAGCACCGCGTGCC
CGGCGAGCGGACCTAA

Upstream 100 bases:

>100_bases
CGCGCGTGCTGCCGGCCGACGTATGGGGCGAGCACGGGCCGCTGCCGCAGCGTCCGGCGGCCGAGGCGGTCAGCGAGCCG
CGCGTGGCCGTCCGCGAATC

Downstream 100 bases:

>100_bases
CGCGCGTAGCGCGCGAGCGTCAGGCCGGACAGATCGATCTCGGGTTCGCGGCCGGTCACGAGATCCGCGAGCACCTTGCC
CGATCCCATCGACATCGCCC

Product: 2'-5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNGDRLRVFVALMPDAASRDALHALPVTRGARRTLAAQLHVTLAFIGAIERDRCDALAARLPVLAAAHPLPPQPVERIAW
WPSLPRARLIVAELAREPACAALNAALAASLAELGLPADPRPFRPHVTLARLPRDAVGQPAHGGAPGRPVALRFDALTLF
ESRLSHEGVSHRPIVSAPIACLEHRVPGERT

Sequences:

>Translated_191_residues
MNGDRLRVFVALMPDAASRDALHALPVTRGARRTLAAQLHVTLAFIGAIERDRCDALAARLPVLAAAHPLPPQPVERIAW
WPSLPRARLIVAELAREPACAALNAALAASLAELGLPADPRPFRPHVTLARLPRDAVGQPAHGGAPGRPVALRFDALTLF
ESRLSHEGVSHRPIVSAPIACLEHRVPGERT
>Mature_191_residues
MNGDRLRVFVALMPDAASRDALHALPVTRGARRTLAAQLHVTLAFIGAIERDRCDALAARLPVLAAAHPLPPQPVERIAW
WPSLPRARLIVAELAREPACAALNAALAASLAELGLPADPRPFRPHVTLARLPRDAVGQPAHGGAPGRPVALRFDALTLF
ESRLSHEGVSHRPIVSAPIACLEHRVPGERT

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20449; Mature: 20449

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGDRLRVFVALMPDAASRDALHALPVTRGARRTLAAQLHVTLAFIGAIERDRCDALAAR
CCCCEEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LPVLAAAHPLPPQPVERIAWWPSLPRARLIVAELAREPACAALNAALAASLAELGLPADP
HHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
RPFRPHVTLARLPRDAVGQPAHGGAPGRPVALRFDALTLFESRLSHEGVSHRPIVSAPIA
CCCCCCCHHHHCCHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH
CLEHRVPGERT
HHHHCCCCCCC
>Mature Secondary Structure
MNGDRLRVFVALMPDAASRDALHALPVTRGARRTLAAQLHVTLAFIGAIERDRCDALAAR
CCCCEEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LPVLAAAHPLPPQPVERIAWWPSLPRARLIVAELAREPACAALNAALAASLAELGLPADP
HHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
RPFRPHVTLARLPRDAVGQPAHGGAPGRPVALRFDALTLFESRLSHEGVSHRPIVSAPIA
CCCCCCCHHHHCCHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH
CLEHRVPGERT
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA