| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is ccsB [H]
Identifier: 161523462
GI number: 161523462
Start: 308615
End: 310831
Strand: Direct
Name: ccsB [H]
Synonym: Bmul_0282
Alternate gene names: 161523462
Gene position: 308615-310831 (Clockwise)
Preceding gene: 161523461
Following gene: 161523463
Centisome position: 8.95
GC content: 66.04
Gene sequence:
>2217_bases ATGAGCGTTACCACGTCGGGGTTGCAGTCGAAGTCGGGTCATGGTGCGTCGAAGCGCGCGGTCGAGCTGCTCAGCTCGAT GCGCTTCGCGATCGCGCTGCTGGTCGTGCTGTCGATCGCGAGCATCATCGGCACCGTCCTCACCCAGGACGATCCTTATC CGAACTACGTGAACCAGTTCGGCCCGTTCTGGGCCGACATCTTCCGCGCGCTCGGCCTGTACAACGTGTACAGCGCGTGG TGGTTCATGCTGATCCTGATCTTCCTCGTCGTGTCGATCTCGCTGTGCGTGATCCGCAACGCGCCGAAGATGCTCGCCGA CGCGAAGAGCTGGAAGGACAAGGTCCGCGAAGGCAGCCTGCGCGCGTTCCATCACAAGGCCGAGTATTCGGCGAGCGGCA CGCGCGCGGCCGCGACGGCGACGCTCGCCGCGTTCGTCGCCAAGGCCGGCTACAAGCACGTCGTGCGCGAAACCGACGGC GCGACGCTGATCTCCGCGAAGCGCGGCGCGATGACGAAGTGGGGCTACATCTCCGCGCACCTCGCGATCGTCGTGATCTG TATCGGCGGGCTGCTCGACAGCAATCTGCCCATCAAATTCCAGATGTGGTTGTTCGGCAAGAGCCCCGTCAACACGAGCG CGACGATCAGCGAGATTTCGGCCGATCACCGGCTGTCCGCGTCGAACCCGACGTTCCGCGGCTACGCCTGGGTGCCCGAG GGCCAGTTCGTGTCGACCGCGATCCTGAACCAGCCGAGCGGCTCGCTGATCCAGGATCTGCCATTCTCGATCCAGCTGAA CAAGTTCATCGTCGACTACTACTCGACCGGCATGCCGAAGCTGTTCGCGAGCGACATCGTCGTGATCGATCGCGAGACGG GCCGCAAGATTCCGGCGCGTGTCGAGGTCAACAAGCCGTTCACGTACAAGGGCGTGTCGATCTATCAGTCGTCCTTCCAG GACGGCGGCTCGCAGATGCAGATGACTGCCTACCCGATGACGGGCGGCAGCGCCAAGCCGTTCGCGGTGCAGGGCACGAT CGGCAGCTCGACGCCGCTGCAGATGCCCGGCGTCGACGGCGACACGATCGAGTTCGCCGATTTCCGCGCGATCAACGTCG AGAACATGGCGGACGCGAACGGCAAGCCGGACGTGCGCGGCGTCGCGAAGACCGCATCGCTGAAGGAGGCGTTCGACGAG CGGCTCGGCTCGGGCGCGAAGACCTCGAAGCCGATGCAGCTGCACAACATCGGGCCGTCGGTGCAGTACAAGATCCGCGG CAAGGACGGTCAGGCGCGCGAATTCAACAACTACATGCTGCCCGTCGACATGAACGGCGAGCGCGTGTTCCTCGCGGGCG TGCGCGCGAGCCCGAACGATCCGTTCCGCTACATGCGGATTCCGGCCGACGGCCAGGATTCGATCGGCGAATGGATGCGT CTGCGCGCGGCGCTCGAGGATCCGGCCGTGCGCGCGGAAGCGGCCGCGCGCTTCGCGCAGCGTTCGCTGCCGGGCACGGA CGCGTCGCTGCGCGCGCGCCTGCAGGACAGCGCGCAGAAGGTGCTGACCCTTTTCGCGGCGAGCGACGACAGCGTCGGCC GCGGCGCGGACGGCCAGCCGATCGGCGGCTTCCAGGCCGTCGCGACCTTCATCGACCGTTCGGTGCCGAAGGCCGAGCAG GAGAAAGCCGCGAACCTGATGCTGCGCATGCTCGAAGGCTCGATGTGGGAAGTCTGGCAGATCGCGCGCGAGCGCGCCGG CGAGCCGGCCGCGCAGCAGGGCAACGACACGCTCCGCTTCGTGCAGAACGCGCTGAACGCGCTGTCCGACAGCTTTTTGT ATGGCGCGCCCGTCTATCTGCAGCTCGACTCCTTCAAGCAGGTGCAAGCTTCGGTATTTCAGCTGACGCGCGCACCCGGC AAGAATCTGGTGTATCTTGGCAGCCTGCTGTTGGTCGCCGGCATCTTCGCGATGTTCTATGTGCGCGAGCGGCGTCTGTG GTTCTGGCTGAAGGACGCCGGCTCCGGCGTCGACGTGGTGATGGCGATGTCCACGGCCCGCAAGACCTTCGATTTCGAGA AAGAATTCGTGCAGACGCGCGATGCGGCGGGCGCCGCGTTGCACGCCGCACCGCGCGATGCCGCGCCGGCCGGTGCCGCT TCAGCCGCGCGTCCGCCCGTCGGCGGCGATTCCGATTCCGAGAATTCCACCCGGTAA
Upstream 100 bases:
>100_bases GACCGGGCGCCGAAGGGCGGCCGGAGTCAGAACAAGAAAAGGGTGGGGCGCCGCGTCGTTGCGGCCGCCTTGCCCTTTTT TGTTGTCAGTCGGAGTTTGA
Downstream 100 bases:
>100_bases CATCATGGATCTCACTCAAGTCTCCTCTTCCCGTCCGGCGTCGGCCAAGGCGCCGGCTCCGGCCGCGTCGTTCGACGAGC GTCCGTTCCTCGCGCGCCTG
Product: ResB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 737
Protein sequence:
>738_residues MSVTTSGLQSKSGHGASKRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRALGLYNVYSAW WFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSLRAFHHKAEYSASGTRAAATATLAAFVAKAGYKHVVRETDG ATLISAKRGAMTKWGYISAHLAIVVICIGGLLDSNLPIKFQMWLFGKSPVNTSATISEISADHRLSASNPTFRGYAWVPE GQFVSTAILNQPSGSLIQDLPFSIQLNKFIVDYYSTGMPKLFASDIVVIDRETGRKIPARVEVNKPFTYKGVSIYQSSFQ DGGSQMQMTAYPMTGGSAKPFAVQGTIGSSTPLQMPGVDGDTIEFADFRAINVENMADANGKPDVRGVAKTASLKEAFDE RLGSGAKTSKPMQLHNIGPSVQYKIRGKDGQAREFNNYMLPVDMNGERVFLAGVRASPNDPFRYMRIPADGQDSIGEWMR LRAALEDPAVRAEAAARFAQRSLPGTDASLRARLQDSAQKVLTLFAASDDSVGRGADGQPIGGFQAVATFIDRSVPKAEQ EKAANLMLRMLEGSMWEVWQIARERAGEPAAQQGNDTLRFVQNALNALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPG KNLVYLGSLLLVAGIFAMFYVRERRLWFWLKDAGSGVDVVMAMSTARKTFDFEKEFVQTRDAAGAALHAAPRDAAPAGAA SAARPPVGGDSDSENSTR
Sequences:
>Translated_738_residues MSVTTSGLQSKSGHGASKRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRALGLYNVYSAW WFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSLRAFHHKAEYSASGTRAAATATLAAFVAKAGYKHVVRETDG ATLISAKRGAMTKWGYISAHLAIVVICIGGLLDSNLPIKFQMWLFGKSPVNTSATISEISADHRLSASNPTFRGYAWVPE GQFVSTAILNQPSGSLIQDLPFSIQLNKFIVDYYSTGMPKLFASDIVVIDRETGRKIPARVEVNKPFTYKGVSIYQSSFQ DGGSQMQMTAYPMTGGSAKPFAVQGTIGSSTPLQMPGVDGDTIEFADFRAINVENMADANGKPDVRGVAKTASLKEAFDE RLGSGAKTSKPMQLHNIGPSVQYKIRGKDGQAREFNNYMLPVDMNGERVFLAGVRASPNDPFRYMRIPADGQDSIGEWMR LRAALEDPAVRAEAAARFAQRSLPGTDASLRARLQDSAQKVLTLFAASDDSVGRGADGQPIGGFQAVATFIDRSVPKAEQ EKAANLMLRMLEGSMWEVWQIARERAGEPAAQQGNDTLRFVQNALNALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPG KNLVYLGSLLLVAGIFAMFYVRERRLWFWLKDAGSGVDVVMAMSTARKTFDFEKEFVQTRDAAGAALHAAPRDAAPAGAA SAARPPVGGDSDSENSTR >Mature_737_residues SVTTSGLQSKSGHGASKRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRALGLYNVYSAWW FMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSLRAFHHKAEYSASGTRAAATATLAAFVAKAGYKHVVRETDGA TLISAKRGAMTKWGYISAHLAIVVICIGGLLDSNLPIKFQMWLFGKSPVNTSATISEISADHRLSASNPTFRGYAWVPEG QFVSTAILNQPSGSLIQDLPFSIQLNKFIVDYYSTGMPKLFASDIVVIDRETGRKIPARVEVNKPFTYKGVSIYQSSFQD GGSQMQMTAYPMTGGSAKPFAVQGTIGSSTPLQMPGVDGDTIEFADFRAINVENMADANGKPDVRGVAKTASLKEAFDER LGSGAKTSKPMQLHNIGPSVQYKIRGKDGQAREFNNYMLPVDMNGERVFLAGVRASPNDPFRYMRIPADGQDSIGEWMRL RAALEDPAVRAEAAARFAQRSLPGTDASLRARLQDSAQKVLTLFAASDDSVGRGADGQPIGGFQAVATFIDRSVPKAEQE KAANLMLRMLEGSMWEVWQIARERAGEPAAQQGNDTLRFVQNALNALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPGK NLVYLGSLLLVAGIFAMFYVRERRLWFWLKDAGSGVDVVMAMSTARKTFDFEKEFVQTRDAAGAALHAAPRDAAPAGAAS AARPPVGGDSDSENSTR
Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]
COG id: COG1333
COG function: function code O; ResB protein required for cytochrome c biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ccs1/ccsB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007816 [H]
Pfam domain/function: PF05140 ResB [H]
EC number: NA
Molecular weight: Translated: 80146; Mature: 80015
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTSGLQSKSGHGASKRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC GPFWADIFRALGLYNVYSAWWFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH RAFHHKAEYSASGTRAAATATLAAFVAKAGYKHVVRETDGATLISAKRGAMTKWGYISAH HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCCHHHHHH LAIVVICIGGLLDSNLPIKFQMWLFGKSPVNTSATISEISADHRLSASNPTFRGYAWVPE HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCC GQFVSTAILNQPSGSLIQDLPFSIQLNKFIVDYYSTGMPKLFASDIVVIDRETGRKIPAR CCEEEHHHHCCCCCCHHHHCCCEEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCE VEVNKPFTYKGVSIYQSSFQDGGSQMQMTAYPMTGGSAKPFAVQGTIGSSTPLQMPGVDG EECCCCCEECCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCC DTIEFADFRAINVENMADANGKPDVRGVAKTASLKEAFDERLGSGAKTSKPMQLHNIGPS CEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC VQYKIRGKDGQAREFNNYMLPVDMNGERVFLAGVRASPNDPFRYMRIPADGQDSIGEWMR EEEEEECCCCCCEECCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHH LRAALEDPAVRAEAAARFAQRSLPGTDASLRARLQDSAQKVLTLFAASDDSVGRGADGQP HHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IGGFQAVATFIDRSVPKAEQEKAANLMLRMLEGSMWEVWQIARERAGEPAAQQGNDTLRF CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCHHHHH VQNALNALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPGKNLVYLGSLLLVAGIFAMFY HHHHHHHHHCCHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VRERRLWFWLKDAGSGVDVVMAMSTARKTFDFEKEFVQTRDAAGAALHAAPRDAAPAGAA HHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC SAARPPVGGDSDSENSTR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVTTSGLQSKSGHGASKRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC GPFWADIFRALGLYNVYSAWWFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH RAFHHKAEYSASGTRAAATATLAAFVAKAGYKHVVRETDGATLISAKRGAMTKWGYISAH HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCCHHHHHH LAIVVICIGGLLDSNLPIKFQMWLFGKSPVNTSATISEISADHRLSASNPTFRGYAWVPE HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCC GQFVSTAILNQPSGSLIQDLPFSIQLNKFIVDYYSTGMPKLFASDIVVIDRETGRKIPAR CCEEEHHHHCCCCCCHHHHCCCEEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCE VEVNKPFTYKGVSIYQSSFQDGGSQMQMTAYPMTGGSAKPFAVQGTIGSSTPLQMPGVDG EECCCCCEECCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCC DTIEFADFRAINVENMADANGKPDVRGVAKTASLKEAFDERLGSGAKTSKPMQLHNIGPS CEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC VQYKIRGKDGQAREFNNYMLPVDMNGERVFLAGVRASPNDPFRYMRIPADGQDSIGEWMR EEEEEECCCCCCEECCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHH LRAALEDPAVRAEAAARFAQRSLPGTDASLRARLQDSAQKVLTLFAASDDSVGRGADGQP HHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IGGFQAVATFIDRSVPKAEQEKAANLMLRMLEGSMWEVWQIARERAGEPAAQQGNDTLRF CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCHHHHH VQNALNALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPGKNLVYLGSLLLVAGIFAMFY HHHHHHHHHCCHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH VRERRLWFWLKDAGSGVDVVMAMSTARKTFDFEKEFVQTRDAAGAALHAAPRDAAPAGAA HHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC SAARPPVGGDSDSENSTR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]