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The map label for this gene is secY [H]

Identifier: 161523449

GI number: 161523449

Start: 298269

End: 299618

Strand: Direct

Name: secY [H]

Synonym: Bmul_0269

Alternate gene names: 161523449

Gene position: 298269-299618 (Clockwise)

Preceding gene: 161523448

Following gene: 161523450

Centisome position: 8.65

GC content: 60.37

Gene sequence:

>1350_bases
TTGGCTAACAGCCCGAGTCTTGCAAAACCCGGTCGAAGCACGGCGAAATTCGGCGATCTGCGCCGGCGAGCGATGTTCCT
GCTCCTGGCGCTGATCGTCTATCGCATCGGCGCGCACATCCCCGTGCCGGGCATCGATCCGGATCAACTGGCGAAGCTGT
TCCAGAGTCAGGCGGGCGGCATCCTGGGCATGTTCAACATGTTCTCGGGCGGCGCGCTGTCGCGTTTCACGATCTTCGCG
CTGGGGATCATGCCGTACATCTCGGCGTCGATCATCATGCAGCTGTTGGCGATCGTGTCGCCGCAGCTCGAGGCGCTGAA
GAAGGAAGGGCAGGCAGGGCAACGGAAGATCACGCAGTACACGCGGTATTTCACCGTGGTGCTCGCGACCTTCCAGGCGT
TCGGTATCGCGGCTGCGCTGGAAAACCAGCCGGGCCTCGTGATCGATCCCGGCATGCTGTTCCGGCTGACGACGGTCGTG
ACGCTGGTCACCGGTACGATGTTCCTGATGTGGCTCGGCGAGCAGATCACCGAGCGCGGTCTGGGCAACGGTATCTCGAT
CATCATCTTCGGCGGGATTGCAGCAGGGTTCCCGAATGCCGTGAGCGGTCTGTTCGAGCTGGTGCGCACGGGTTCGATGA
GCATCATTTCGGCGATCATCATCGTCGTTCTGATTGCCGCGGTGACTTACCTGGTCGTGTTCATCGAACGCGGTCAGCGC
AAGATCCTCGTGAACTACGCGAAGCGTCAGGTCGGCAACAAGATCTACGGCGGGCAGTCGTCGCACCTGCCGCTGAAGCT
GAACATGTCGGGCGTGATTCCGCCGATCTTCGCGTCGTCGATCATCCTGTTCCCGGCCACGATTCTCGGCTGGTTCAGCA
CGGGTCAACCGTCGGGGAGCTGGATCTCCAACACGTTGCATAACGTCGCGGAGGCGCTGAAGCCGGGCCAGCCGGTCTAT
GTGCTGCTGTACACGCTGGCGATCGTGTTTTTCTGCTTCTTCTACACCGCACTGGTGTTCAACAGCAGGGAAACCGCGGA
CAACCTGAAGAAGAGCGGCGCGTTCGTGCCGGGCATCCGTCCGGGCGACCAGACCGCGCGATATATCGACCGCATCCTCA
CGCGTCTGACGCTGGCCGGTGCGATCTACATCGTCTTCGTGTGTCTGCTGCCGGAATTTCTGGTGCTGCGCTGGAACGTG
CCGTTTTATTTTGGTGGAACGTCGCTGCTGATCATTGTCGTCGTCACGATGGACTTCATGGCGCAGGTGCAGTCGTACGT
TATGTCGCAACAGTATGAGTCGCTGCTCAAGAAGGCCAACTTCAAGGGCGGCAACATCCCAATGCGTTAA

Upstream 100 bases:

>100_bases
CGCCACGAAGAGTGCGCGCGCTGCGATCGAAGCGGCTGGCGGTTCGTTCGCCGAGTGACACGCGTAGCGCGTCGTCACTT
GCATTCATCGGAGAAGGTAC

Downstream 100 bases:

>100_bases
AAGGACTATGGCCAAAGACGATGTAATCCAGATGCAGGGTGAGGTGATCGAAAACCTCCCGAATGCGACCTTCCGCGTGA
AGCTGGAAAACGGCCATGTC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGGILGMFNMFSGGALSRFTIFA
LGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRYFTVVLATFQAFGIAAALENQPGLVIDPGMLFRLTTVV
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAVSGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPSGSWISNTLHNVAEALKPGQPVY
VLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNV
PFYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGNIPMR

Sequences:

>Translated_449_residues
MANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGGILGMFNMFSGGALSRFTIFA
LGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRYFTVVLATFQAFGIAAALENQPGLVIDPGMLFRLTTVV
TLVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAVSGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPSGSWISNTLHNVAEALKPGQPVY
VLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNV
PFYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGNIPMR
>Mature_448_residues
ANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGGILGMFNMFSGGALSRFTIFAL
GIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQYTRYFTVVLATFQAFGIAAALENQPGLVIDPGMLFRLTTVVT
LVTGTMFLMWLGEQITERGLGNGISIIIFGGIAAGFPNAVSGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQRK
ILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPSGSWISNTLHNVAEALKPGQPVYV
LLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIRPGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVP
FYFGGTSLLIIVVVTMDFMAQVQSYVMSQQYESLLKKANFKGGNIPMR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=450, Percent_Identity=65.1111111111111, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49025; Mature: 48894

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
ILGMFNMFSGGALSRFTIFALGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQY
CEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
TRYFTVVLATFQAFGIAAALENQPGLVIDPGMLFRLTTVVTLVTGTMFLMWLGEQITERG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGNGISIIIFGGIAAGFPNAVSGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
CCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPSGS
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
WISNTLHNVAEALKPGQPVYVLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
PGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
AQVQSYVMSQQYESLLKKANFKGGNIPMR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANSPSLAKPGRSTAKFGDLRRRAMFLLLALIVYRIGAHIPVPGIDPDQLAKLFQSQAGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
ILGMFNMFSGGALSRFTIFALGIMPYISASIIMQLLAIVSPQLEALKKEGQAGQRKITQY
CEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
TRYFTVVLATFQAFGIAAALENQPGLVIDPGMLFRLTTVVTLVTGTMFLMWLGEQITERG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGNGISIIIFGGIAAGFPNAVSGLFELVRTGSMSIISAIIIVVLIAAVTYLVVFIERGQR
CCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KILVNYAKRQVGNKIYGGQSSHLPLKLNMSGVIPPIFASSIILFPATILGWFSTGQPSGS
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH
WISNTLHNVAEALKPGQPVYVLLYTLAIVFFCFFYTALVFNSRETADNLKKSGAFVPGIR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
PGDQTARYIDRILTRLTLAGAIYIVFVCLLPEFLVLRWNVPFYFGGTSLLIIVVVTMDFM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
AQVQSYVMSQQYESLLKKANFKGGNIPMR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]