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The map label for this gene is ybcL [H]

Identifier: 161523398

GI number: 161523398

Start: 242371

End: 242961

Strand: Reverse

Name: ybcL [H]

Synonym: Bmul_0218

Alternate gene names: 161523398

Gene position: 242961-242371 (Counterclockwise)

Preceding gene: 161523399

Following gene: 161523397

Centisome position: 7.05

GC content: 72.25

Gene sequence:

>591_bases
ATGCGTGTCGATCGCCGGATCGCTCCGCCTGCGCCATCGGGTCGTCCGCGTGCGTTCGTCGTCACCGCCGCCTGCGCGAT
GCTCGCCTGTGCGTTCGCGCATGCGCAAGCGCCGTTCACCGTCTCGAGCGAGGATCTGACGCCCGGCGGCCGCGTCGGCA
CCGCGAACCTGTTCGACCGCGGCGACTGCAAGGGCGAGAACCGTTCGCCGCAGCTGAGCTGGCGCAATCCGCCGCCCGGC
ACGCAAGGCTACGCCGTCACGATGTTCGACCCCGACGCACCGGGCCGCGGCTGGTGGCACTGGGCCGTGACGGGCATTCC
GCGTACCGTCACGAGCCTGCCGGCCGATGCGAGCGCGTCCGGCTTCCTCCGGCGCATCGGCGCGAGCGAGGCGCGCAACG
ACTTCGGCACCGACGGCTACGGCGGCCCGTGCCCGCCGCCCGGCAGGCCGCATCGCTACGTGATCACCGTCTATGCGCTG
AAGGCGACGGACCTGCGCGTCGCGCAAGGCCGGCCGGCGCCGATGTTCGAGCACGAGATCGGCACCGAGACGATCGGCAC
CGCGCGGCTCGTCGTCCACTACGGACAGTGA

Upstream 100 bases:

>100_bases
TGCTAGACTTGATCCGTCGCCGCCTGCCCTTGCGCCGGCCACGCACACACCAACAATGCCGGGCCGCTCGGCCCGCGCCA
CGTGACGGGAGAAGCGCCAT

Downstream 100 bases:

>100_bases
CGCATCGGACGCCTTTCCGTCATGTCGGCTCGCTAGACTGCGTCTTGCCGCTCGCCGCGGCGCGCCGCGCGGCGGTGACG
GCGCCTGCGCGTCGCGCAGG

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRVDRRIAPPAPSGRPRAFVVTAACAMLACAFAHAQAPFTVSSEDLTPGGRVGTANLFDRGDCKGENRSPQLSWRNPPPG
TQGYAVTMFDPDAPGRGWWHWAVTGIPRTVTSLPADASASGFLRRIGASEARNDFGTDGYGGPCPPPGRPHRYVITVYAL
KATDLRVAQGRPAPMFEHEIGTETIGTARLVVHYGQ

Sequences:

>Translated_196_residues
MRVDRRIAPPAPSGRPRAFVVTAACAMLACAFAHAQAPFTVSSEDLTPGGRVGTANLFDRGDCKGENRSPQLSWRNPPPG
TQGYAVTMFDPDAPGRGWWHWAVTGIPRTVTSLPADASASGFLRRIGASEARNDFGTDGYGGPCPPPGRPHRYVITVYAL
KATDLRVAQGRPAPMFEHEIGTETIGTARLVVHYGQ
>Mature_196_residues
MRVDRRIAPPAPSGRPRAFVVTAACAMLACAFAHAQAPFTVSSEDLTPGGRVGTANLFDRGDCKGENRSPQLSWRNPPPG
TQGYAVTMFDPDAPGRGWWHWAVTGIPRTVTSLPADASASGFLRRIGASEARNDFGTDGYGGPCPPPGRPHRYVITVYAL
KATDLRVAQGRPAPMFEHEIGTETIGTARLVVHYGQ

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=177, Percent_Identity=39.5480225988701, Blast_Score=133, Evalue=8e-33,
Organism=Escherichia coli, GI1786990, Length=153, Percent_Identity=34.640522875817, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20984; Mature: 20984

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDRRIAPPAPSGRPRAFVVTAACAMLACAFAHAQAPFTVSSEDLTPGGRVGTANLFDR
CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCC
GDCKGENRSPQLSWRNPPPGTQGYAVTMFDPDAPGRGWWHWAVTGIPRTVTSLPADASAS
CCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHCCCCCCCHH
GFLRRIGASEARNDFGTDGYGGPCPPPGRPHRYVITVYALKATDLRVAQGRPAPMFEHEI
HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCCCCHHHHC
GTETIGTARLVVHYGQ
CCCCCCEEEEEEEECC
>Mature Secondary Structure
MRVDRRIAPPAPSGRPRAFVVTAACAMLACAFAHAQAPFTVSSEDLTPGGRVGTANLFDR
CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCC
GDCKGENRSPQLSWRNPPPGTQGYAVTMFDPDAPGRGWWHWAVTGIPRTVTSLPADASAS
CCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHCCCCCCCHH
GFLRRIGASEARNDFGTDGYGGPCPPPGRPHRYVITVYALKATDLRVAQGRPAPMFEHEI
HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCCCCCCHHHHC
GTETIGTARLVVHYGQ
CCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]