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The map label for this gene is cyt [H]

Identifier: 161523380

GI number: 161523380

Start: 222822

End: 223193

Strand: Direct

Name: cyt [H]

Synonym: Bmul_0200

Alternate gene names: 161523380

Gene position: 222822-223193 (Clockwise)

Preceding gene: 161523379

Following gene: 161523383

Centisome position: 6.46

GC content: 71.51

Gene sequence:

>372_bases
ATGAGCGCTGCGCCGATGAAGTCGTTCAGGCAGGTGGCGCGCCGCGTCGTGCAGGGCGCCGTGGCGGCGTCGCTCGTCGG
TGCGTGGGCCGCAAGCGCGCACGCGCAGGCCGGCGACGGGCTCAGGGTCGCGCGCAGCAACGCGTGCCTCGGCTGTCACG
CGGTCGACCGCAAGCTCGTCGGCCCGTCGTTCAAGGACATCGCCGCGCGCTACAAGGGCGATCCGCAGGCCGTCGCGAAG
CTGTCGAAGAAAGTGAAGGACGGCGGCTCGGGCGTCTGGGGCGCGATTCCGATGCCCGCGCACCCGCGAATGAGCGATGC
CGATCTGCGCTCGGTCGTCGAATGGGTGCTGGCCGGCGCGCCGCAAAAGTGA

Upstream 100 bases:

>100_bases
CGGTGCCCGACGCGTCGGTGCAGTCCACGCCGCTGCAGCCGCCCGCGCCGATCTCGAATTCGTCGGGCGTGCATCCGGGC
AACCCGAAGGCGACGCCGCA

Downstream 100 bases:

>100_bases
GGTTCGGCGGGCCGCCGCGCGCGACCTTGCGCGGGCGCAAGCGCTTGGGGGCAACCCTATTGCCAAGCGCAGAAATGCGT
GTGTATGATGACGGTTTGTT

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSAAPMKSFRQVARRVVQGAVAASLVGAWAASAHAQAGDGLRVARSNACLGCHAVDRKLVGPSFKDIAARYKGDPQAVAK
LSKKVKDGGSGVWGAIPMPAHPRMSDADLRSVVEWVLAGAPQK

Sequences:

>Translated_123_residues
MSAAPMKSFRQVARRVVQGAVAASLVGAWAASAHAQAGDGLRVARSNACLGCHAVDRKLVGPSFKDIAARYKGDPQAVAK
LSKKVKDGGSGVWGAIPMPAHPRMSDADLRSVVEWVLAGAPQK
>Mature_122_residues
SAAPMKSFRQVARRVVQGAVAASLVGAWAASAHAQAGDGLRVARSNACLGCHAVDRKLVGPSFKDIAARYKGDPQAVAKL
SKKVKDGGSGVWGAIPMPAHPRMSDADLRSVVEWVLAGAPQK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12773; Mature: 12642

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPMKSFRQVARRVVQGAVAASLVGAWAASAHAQAGDGLRVARSNACLGCHAVDRKLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHC
GPSFKDIAARYKGDPQAVAKLSKKVKDGGSGVWGAIPMPAHPRMSDADLRSVVEWVLAGA
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PQK
CCC
>Mature Secondary Structure 
SAAPMKSFRQVARRVVQGAVAASLVGAWAASAHAQAGDGLRVARSNACLGCHAVDRKLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHC
GPSFKDIAARYKGDPQAVAKLSKKVKDGGSGVWGAIPMPAHPRMSDADLRSVVEWVLAGA
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PQK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]