Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 161523347

GI number: 161523347

Start: 187861

End: 189840

Strand: Direct

Name: tse [H]

Synonym: Bmul_0167

Alternate gene names: 161523347

Gene position: 187861-189840 (Clockwise)

Preceding gene: 161523346

Following gene: 161523348

Centisome position: 5.45

GC content: 71.01

Gene sequence:

>1980_bases
ATGTTGCAAAACTGGTCGATCCGCACGACCCTCACGGCGGTCGGACTCATCCTCGTCTGTCTTGCCGCCGCGATCGGCGG
CCTCGGTCTGTTCGCGCTGAATCACGCGAGCCGCTCGCTCGACGAGATCGCGCACGTCGATCTGCCGGCGATCCACGCGC
TCGACGATACGTCGTCGTATCTGCTGCGCGCGCGCGTGTCGCTCGACCGCTTCCGTTCGCTGACCGAGGCCGGCAACGCG
GCCGAGGCCGCGAAGGTGCTCGATCGCGCGCAGGAGCTGTTCGCGAAGTCGAACCAGAACTGGCAGACGTTCCAGTCGAC
GCCGAAGCTCGGCGTCGAGCAGGCGCTCGTCGACGAGCTCGCCGCGCGCTACGCGACGATCGTGAAGGAAGGCGTCGAGC
CGGAATTCGCGGCCGCGCGCGCGGGCGACATGGCCGCTTACCACGCGGTCGCCGATACGAAGATCAGCCCGATGTTCGTC
GCATACGACCAGGCCGCCGCGGCCGTGATCGCGTCGCTGCAGCAGCGTGCGAACGACCGCCACGCGTCGACGCAATCGCA
GATCTCGCTGATGATCGCGCTGATCGCGGCCGGCATCGCGATCGCGTTCGTCGTCGTGATCGCGATCCGCTTCGCGCTGC
GCGGGCTGATCGTCAAGCCGCTCGAGGACGCAATCGCGCATTTCGAACGGATCGCCGGCGGCGACCTCACGCAGCCGGTG
CACGTGTTCAGCAAGAACGAGATCGGCCGGCTGTTCGGCGGCATCAAGCGCATGCAGGATGCCGTGACCGCGATGGTGCA
GGCCGTGCACCGCGGCACCGAATCGATCGACGTCGGCGCGCGCGAGATCGCGACCGGCAATACGGATCTGTCGCAGCGCA
CCGAGGAACAGGCCGCGTCGCTGCAGGAAACCGCGTCGAGCATGGAGCAGCTGACGGGCACCGTGCGGCAGAACGCGGAG
AACGCACGGCAGGCGAGCCAGCTCGCTGTGAACGCGTCGGACATCGCGACGCAGGGCGGCGAGGTCGTCGGCCAGGTCGT
GTCGACGATGCAGGACATCGCGGCGAGCTCGGGCAAGATCGTCGACATCATCGGCACGATCGAAGGGATCGCGTTCCAGA
CCAACATCCTCGCGCTGAACGCGGCGGTCGAAGCGGCGCGCGCAGGCGAGCAGGGCCGCGGCTTCGCGGTCGTCGCCGGC
GAGGTGCGCTCGCTCGCGCAGCGCAGCGCGACGGCCGCGAAGGAGATCAAGCAGCTGATCGGCGATTCGGCCGCGAAGGT
CGACAGCGGTTCGGCGCTCGTCGCGCGCGCGGGCTCGACGATGGACGAGATCGTCCAGGCCGTGCGCCGCGTGACGGACA
TCATGGGCGAGATCAGCGCCGCGTCGGACGAGCAGTCGACCGGCATCGAGCAGGTCAATCGCGCGGTCGGCCAGATGGAC
GCCGTCACGCAGCAGAACGCGGCGCTCGTCGAGCAGGCGGCCGCCGCGGCCGCGTCGCTCGAGGAGCAGACGCGTCAGAT
GAAGGCGATCGTGTCGACCTGGCGTGTCGCAGGCGGCACGGCGCTCGCGCCGGTGCGTGCCGCGCGTACGGTCGAAGCGG
CGGCCGTGCCCGCGCTGCCGGCCGGCACGCCGCGCGACGACGCACCGGTCGCCGCACTGCCGGCGCCGGGCGCGTCGAAC
GCATCGCATGCCGCATCGAACGGATCGAACGCGTCGAACACCGCATCGCAGCCGGCTCGACGCGCATCCGGCTCGGCTGC
GTCGTCGAGCGCCGCCCGCACGGCCGCCGACTCCGCGGCCCGCACGCCGGCGGCGAAGGACGCGCCGGCCGCGTCGGGCT
ACGGGCCGCGCGTCGCGAAGGCCGCCGCACCGGCCGACAAGCCGGCCGCGAAGCCCGCGCTCGTGCGTCCGGTGCTGAAC
GGCGAGAAGCCGGCGCTGGCGACGGCCGGCGCGTCCGACGACGACTGGGAGACCTTCTAA

Upstream 100 bases:

>100_bases
GACATCGAGAAGCTGATGTCGAGCCGCGAAATGGCGCTGATCGAAACGCTCGGCGCATAAGCGCGCGATACGCGCGCACG
GAACTTCGGGAGAATCTGCG

Downstream 100 bases:

>100_bases
ATCATGCAGGCCGCGCGCGTGCCGTTTCGACCCGATGCACCGGATGCCTCGCCTCGCGCGGGCGAGCCGGGGCGCGACTT
CGCGTTCACGGGCGCGGATT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MLQNWSIRTTLTAVGLILVCLAAAIGGLGLFALNHASRSLDEIAHVDLPAIHALDDTSSYLLRARVSLDRFRSLTEAGNA
AEAAKVLDRAQELFAKSNQNWQTFQSTPKLGVEQALVDELAARYATIVKEGVEPEFAAARAGDMAAYHAVADTKISPMFV
AYDQAAAAVIASLQQRANDRHASTQSQISLMIALIAAGIAIAFVVVIAIRFALRGLIVKPLEDAIAHFERIAGGDLTQPV
HVFSKNEIGRLFGGIKRMQDAVTAMVQAVHRGTESIDVGAREIATGNTDLSQRTEEQAASLQETASSMEQLTGTVRQNAE
NARQASQLAVNASDIATQGGEVVGQVVSTMQDIAASSGKIVDIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSATAAKEIKQLIGDSAAKVDSGSALVARAGSTMDEIVQAVRRVTDIMGEISAASDEQSTGIEQVNRAVGQMD
AVTQQNAALVEQAAAAAASLEEQTRQMKAIVSTWRVAGGTALAPVRAARTVEAAAVPALPAGTPRDDAPVAALPAPGASN
ASHAASNGSNASNTASQPARRASGSAASSSAARTAADSAARTPAAKDAPAASGYGPRVAKAAAPADKPAAKPALVRPVLN
GEKPALATAGASDDDWETF

Sequences:

>Translated_659_residues
MLQNWSIRTTLTAVGLILVCLAAAIGGLGLFALNHASRSLDEIAHVDLPAIHALDDTSSYLLRARVSLDRFRSLTEAGNA
AEAAKVLDRAQELFAKSNQNWQTFQSTPKLGVEQALVDELAARYATIVKEGVEPEFAAARAGDMAAYHAVADTKISPMFV
AYDQAAAAVIASLQQRANDRHASTQSQISLMIALIAAGIAIAFVVVIAIRFALRGLIVKPLEDAIAHFERIAGGDLTQPV
HVFSKNEIGRLFGGIKRMQDAVTAMVQAVHRGTESIDVGAREIATGNTDLSQRTEEQAASLQETASSMEQLTGTVRQNAE
NARQASQLAVNASDIATQGGEVVGQVVSTMQDIAASSGKIVDIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSATAAKEIKQLIGDSAAKVDSGSALVARAGSTMDEIVQAVRRVTDIMGEISAASDEQSTGIEQVNRAVGQMD
AVTQQNAALVEQAAAAAASLEEQTRQMKAIVSTWRVAGGTALAPVRAARTVEAAAVPALPAGTPRDDAPVAALPAPGASN
ASHAASNGSNASNTASQPARRASGSAASSSAARTAADSAARTPAAKDAPAASGYGPRVAKAAAPADKPAAKPALVRPVLN
GEKPALATAGASDDDWETF
>Mature_659_residues
MLQNWSIRTTLTAVGLILVCLAAAIGGLGLFALNHASRSLDEIAHVDLPAIHALDDTSSYLLRARVSLDRFRSLTEAGNA
AEAAKVLDRAQELFAKSNQNWQTFQSTPKLGVEQALVDELAARYATIVKEGVEPEFAAARAGDMAAYHAVADTKISPMFV
AYDQAAAAVIASLQQRANDRHASTQSQISLMIALIAAGIAIAFVVVIAIRFALRGLIVKPLEDAIAHFERIAGGDLTQPV
HVFSKNEIGRLFGGIKRMQDAVTAMVQAVHRGTESIDVGAREIATGNTDLSQRTEEQAASLQETASSMEQLTGTVRQNAE
NARQASQLAVNASDIATQGGEVVGQVVSTMQDIAASSGKIVDIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRSLAQRSATAAKEIKQLIGDSAAKVDSGSALVARAGSTMDEIVQAVRRVTDIMGEISAASDEQSTGIEQVNRAVGQMD
AVTQQNAALVEQAAAAAASLEEQTRQMKAIVSTWRVAGGTALAPVRAARTVEAAAVPALPAGTPRDDAPVAALPAPGASN
ASHAASNGSNASNTASQPARRASGSAASSSAARTAADSAARTPAAKDAPAASGYGPRVAKAAAPADKPAAKPALVRPVLN
GEKPALATAGASDDDWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=528, Percent_Identity=44.3181818181818, Blast_Score=348, Evalue=5e-97,
Organism=Escherichia coli, GI2367378, Length=513, Percent_Identity=43.859649122807, Blast_Score=343, Evalue=3e-95,
Organism=Escherichia coli, GI1787690, Length=520, Percent_Identity=42.6923076923077, Blast_Score=337, Evalue=2e-93,
Organism=Escherichia coli, GI1788194, Length=338, Percent_Identity=55.6213017751479, Blast_Score=326, Evalue=2e-90,
Organism=Escherichia coli, GI1789453, Length=335, Percent_Identity=39.7014925373134, Blast_Score=219, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67902; Mature: 67902

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNWSIRTTLTAVGLILVCLAAAIGGLGLFALNHASRSLDEIAHVDLPAIHALDDTSSY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH
LLRARVSLDRFRSLTEAGNAAEAAKVLDRAQELFAKSNQNWQTFQSTPKLGVEQALVDEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHH
AARYATIVKEGVEPEFAAARAGDMAAYHAVADTKISPMFVAYDQAAAAVIASLQQRANDR
HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
HASTQSQISLMIALIAAGIAIAFVVVIAIRFALRGLIVKPLEDAIAHFERIAGGDLTQPV
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
HVFSKNEIGRLFGGIKRMQDAVTAMVQAVHRGTESIDVGAREIATGNTDLSQRTEEQAAS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCCCHHHHHHHHHHH
LQETASSMEQLTGTVRQNAENARQASQLAVNASDIATQGGEVVGQVVSTMQDIAASSGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCE
VDIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLI
EEEEHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GDSAAKVDSGSALVARAGSTMDEIVQAVRRVTDIMGEISAASDEQSTGIEQVNRAVGQMD
CCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHH
AVTQQNAALVEQAAAAAASLEEQTRQMKAIVSTWRVAGGTALAPVRAARTVEAAAVPALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
AGTPRDDAPVAALPAPGASNASHAASNGSNASNTASQPARRASGSAASSSAARTAADSAA
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
RTPAAKDAPAASGYGPRVAKAAAPADKPAAKPALVRPVLNGEKPALATAGASDDDWETF
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MLQNWSIRTTLTAVGLILVCLAAAIGGLGLFALNHASRSLDEIAHVDLPAIHALDDTSSY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH
LLRARVSLDRFRSLTEAGNAAEAAKVLDRAQELFAKSNQNWQTFQSTPKLGVEQALVDEL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHH
AARYATIVKEGVEPEFAAARAGDMAAYHAVADTKISPMFVAYDQAAAAVIASLQQRANDR
HHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
HASTQSQISLMIALIAAGIAIAFVVVIAIRFALRGLIVKPLEDAIAHFERIAGGDLTQPV
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
HVFSKNEIGRLFGGIKRMQDAVTAMVQAVHRGTESIDVGAREIATGNTDLSQRTEEQAAS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCCCHHHHHHHHHHH
LQETASSMEQLTGTVRQNAENARQASQLAVNASDIATQGGEVVGQVVSTMQDIAASSGKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCE
VDIIGTIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKQLI
EEEEHHHHHHHEEHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GDSAAKVDSGSALVARAGSTMDEIVQAVRRVTDIMGEISAASDEQSTGIEQVNRAVGQMD
CCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHH
AVTQQNAALVEQAAAAAASLEEQTRQMKAIVSTWRVAGGTALAPVRAARTVEAAAVPALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
AGTPRDDAPVAALPAPGASNASHAASNGSNASNTASQPARRASGSAASSSAARTAADSAA
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
RTPAAKDAPAASGYGPRVAKAAAPADKPAAKPALVRPVLNGEKPALATAGASDDDWETF
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]