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The map label for this gene is fliD [H]

Identifier: 161523330

GI number: 161523330

Start: 169299

End: 170801

Strand: Reverse

Name: fliD [H]

Synonym: Bmul_0150

Alternate gene names: 161523330

Gene position: 170801-169299 (Counterclockwise)

Preceding gene: 161523331

Following gene: 161523329

Centisome position: 4.95

GC content: 66.13

Gene sequence:

>1503_bases
ATGTCCACCGTCAACACCAACACGTCCAGCGCCAGCGCGAACAGCGCGCTTCAGCAAGCCGCGCAGTCGATCATCAGCGG
CTCGACCGGCAATACGACGATGGATGTCAACTCCCTCGTGACAGCGCTCGTGAACGCGAAAACCGCCGGCCAGACCGCCG
CCCTCACCGCGCGGCAGACCAGCGACAACACCCAGATTTCCGCGTACGGCACGCTGTCGTCCGCACTGAGCGCGCTGCAG
GCCGGCCTGACGACGCTCAGCAACGGCACGCTGCAAAGCACATTCACCGCGACGGCCAGCGGCAACGGCCTCACCGCGAC
GGCCGGCCAGGGCGCGGTCGCCGGCACCTACAACGTGAACGTGAGCCGGATCGCGTCCGCGCAGGCGCTGGCGTCGGCCG
GCTTTACCGACCCGAACAAGGGCCTCGGCAGCGGCACGCTCGCGTTGTCGCTCGGCAGCCAGTCGTTCTCCGTCAACATC
GACAGCTCGAATAACACGGTGGCCGGCATCGCGGCCGCGATCAACGGTGCGTCGGGCAACCCCGGCATCACGGCGACGGT
CGTCACCGGCACCGACGGCGCCCACCTCGTGCTGAGCTCGTCGACCACCGGAGCGGCCAACACGATCAGTGTCGAAGTCA
GCAACCTGAGCGGCGACGCCGGGCTGTCGAATCTCGGCGTCAAGTCGGTGCCCGGCCAGAACGGCGGCCCGTCGACCTAC
ACGTCGGCGAACAGCAATGCTGCGTGGTCCCAGAGCACGGCCGCTCAGGACGCCGCGTTCACGATCAACAACATCAGCGC
GACGAGCTCGACCAACACGGTGACGTCGGCGATCACCGGCGTCACGCTGAACCTGACGTCCGCCGCGGTCGGCGACGCGC
AGGCGCAAACGCTGACGATCGCGCCCGACACGAAGTCGCAGGCAACGGCGATCAACAACTTCGTGAGCCTCTACAACACG
CTCGTCACGACGATGGGCACGCTCACCCAATTCACGGCCGGCGCGACGACGCAAGGCCCGCTGCTCGGCGACTCGACGCT
GAACACGGTCAAGAACACGCTCGCATCGCTCGTCACGGCCGGCGTGAAGAGCGGCAGCTCGACGCTCACGCTGTCGTCGA
TCGGCATCACGCTGCAGGCCGACGGCACGCTGCAGACCGACAGTACCAAGCTGAACGCCGCGCTGCAGAGCAACCCGGCG
AGCGTCGCGGCGCTGTTCAATTCGACCAACGGCGTCGGCGCGAAGATGTCGACGGCGATCACCGACTTCACGAAGACGGG
CGGCCTGATCGACCTGCGGACGACCGCGCTCAATGCCGACCTGAAGAGCATCGCGCAGCAGCAGTCGAACCTGTCGGATT
ACGCAACGCAGTTGACGAATCAGTACCAAGCGCAATTCACCGCGCTCAATACGCTGATGGCGACGATGAACAACAATTCG
CAGTACCTGACGCAGCTGTTCGGCGGCCAGAACAGCGCCGGCGCGCTGTCGAACAACAAGTAA

Upstream 100 bases:

>100_bases
CGCAAATCGATAACCGGCTGCATCGCAACAGACCCAGGCCGTCACGCAACACGCAACCGATAACCACACACATCGCTCGT
CCGGGGCACGGAGCCGTCAT

Downstream 100 bases:

>100_bases
GCGGCGCGAGCGGAGCGAACCATGGACCAGTATCAACTGATCGGACGGCTGAACACACTCACCGACGACATCGAGCATGC
CGCATCGATGGCCGACTGGG

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSTVNTNTSSASANSALQQAAQSIISGSTGNTTMDVNSLVTALVNAKTAGQTAALTARQTSDNTQISAYGTLSSALSALQ
AGLTTLSNGTLQSTFTATASGNGLTATAGQGAVAGTYNVNVSRIASAQALASAGFTDPNKGLGSGTLALSLGSQSFSVNI
DSSNNTVAGIAAAINGASGNPGITATVVTGTDGAHLVLSSSTTGAANTISVEVSNLSGDAGLSNLGVKSVPGQNGGPSTY
TSANSNAAWSQSTAAQDAAFTINNISATSSTNTVTSAITGVTLNLTSAAVGDAQAQTLTIAPDTKSQATAINNFVSLYNT
LVTTMGTLTQFTAGATTQGPLLGDSTLNTVKNTLASLVTAGVKSGSSTLTLSSIGITLQADGTLQTDSTKLNAALQSNPA
SVAALFNSTNGVGAKMSTAITDFTKTGGLIDLRTTALNADLKSIAQQQSNLSDYATQLTNQYQAQFTALNTLMATMNNNS
QYLTQLFGGQNSAGALSNNK

Sequences:

>Translated_500_residues
MSTVNTNTSSASANSALQQAAQSIISGSTGNTTMDVNSLVTALVNAKTAGQTAALTARQTSDNTQISAYGTLSSALSALQ
AGLTTLSNGTLQSTFTATASGNGLTATAGQGAVAGTYNVNVSRIASAQALASAGFTDPNKGLGSGTLALSLGSQSFSVNI
DSSNNTVAGIAAAINGASGNPGITATVVTGTDGAHLVLSSSTTGAANTISVEVSNLSGDAGLSNLGVKSVPGQNGGPSTY
TSANSNAAWSQSTAAQDAAFTINNISATSSTNTVTSAITGVTLNLTSAAVGDAQAQTLTIAPDTKSQATAINNFVSLYNT
LVTTMGTLTQFTAGATTQGPLLGDSTLNTVKNTLASLVTAGVKSGSSTLTLSSIGITLQADGTLQTDSTKLNAALQSNPA
SVAALFNSTNGVGAKMSTAITDFTKTGGLIDLRTTALNADLKSIAQQQSNLSDYATQLTNQYQAQFTALNTLMATMNNNS
QYLTQLFGGQNSAGALSNNK
>Mature_499_residues
STVNTNTSSASANSALQQAAQSIISGSTGNTTMDVNSLVTALVNAKTAGQTAALTARQTSDNTQISAYGTLSSALSALQA
GLTTLSNGTLQSTFTATASGNGLTATAGQGAVAGTYNVNVSRIASAQALASAGFTDPNKGLGSGTLALSLGSQSFSVNID
SSNNTVAGIAAAINGASGNPGITATVVTGTDGAHLVLSSSTTGAANTISVEVSNLSGDAGLSNLGVKSVPGQNGGPSTYT
SANSNAAWSQSTAAQDAAFTINNISATSSTNTVTSAITGVTLNLTSAAVGDAQAQTLTIAPDTKSQATAINNFVSLYNTL
VTTMGTLTQFTAGATTQGPLLGDSTLNTVKNTLASLVTAGVKSGSSTLTLSSIGITLQADGTLQTDSTKLNAALQSNPAS
VAALFNSTNGVGAKMSTAITDFTKTGGLIDLRTTALNADLKSIAQQQSNLSDYATQLTNQYQAQFTALNTLMATMNNNSQ
YLTQLFGGQNSAGALSNNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=474, Percent_Identity=34.8101265822785, Blast_Score=174, Evalue=2e-44,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 49524; Mature: 49392

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVNTNTSSASANSALQQAAQSIISGSTGNTTMDVNSLVTALVNAKTAGQTAALTARQT
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEEEC
SDNTQISAYGTLSSALSALQAGLTTLSNGTLQSTFTATASGNGLTATAGQGAVAGTYNVN
CCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCEEEEECCC
VSRIASAQALASAGFTDPNKGLGSGTLALSLGSQSFSVNIDSSNNTVAGIAAAINGASGN
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEECCCCC
PGITATVVTGTDGAHLVLSSSTTGAANTISVEVSNLSGDAGLSNLGVKSVPGQNGGPSTY
CCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
TSANSNAAWSQSTAAQDAAFTINNISATSSTNTVTSAITGVTLNLTSAAVGDAQAQTLTI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCEEEEEECHHHCCCCCCEEEEE
APDTKSQATAINNFVSLYNTLVTTMGTLTQFTAGATTQGPLLGDSTLNTVKNTLASLVTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GVKSGSSTLTLSSIGITLQADGTLQTDSTKLNAALQSNPASVAALFNSTNGVGAKMSTAI
HHCCCCCEEEEEEEEEEEEECCEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH
TDFTKTGGLIDLRTTALNADLKSIAQQQSNLSDYATQLTNQYQAQFTALNTLMATMNNNS
HHHHHCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QYLTQLFGGQNSAGALSNNK
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STVNTNTSSASANSALQQAAQSIISGSTGNTTMDVNSLVTALVNAKTAGQTAALTARQT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEEEC
SDNTQISAYGTLSSALSALQAGLTTLSNGTLQSTFTATASGNGLTATAGQGAVAGTYNVN
CCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCEEEEECCC
VSRIASAQALASAGFTDPNKGLGSGTLALSLGSQSFSVNIDSSNNTVAGIAAAINGASGN
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEEEECCCCC
PGITATVVTGTDGAHLVLSSSTTGAANTISVEVSNLSGDAGLSNLGVKSVPGQNGGPSTY
CCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
TSANSNAAWSQSTAAQDAAFTINNISATSSTNTVTSAITGVTLNLTSAAVGDAQAQTLTI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCEEEEEECHHHCCCCCCEEEEE
APDTKSQATAINNFVSLYNTLVTTMGTLTQFTAGATTQGPLLGDSTLNTVKNTLASLVTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GVKSGSSTLTLSSIGITLQADGTLQTDSTKLNAALQSNPASVAALFNSTNGVGAKMSTAI
HHCCCCCEEEEEEEEEEEEECCEEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH
TDFTKTGGLIDLRTTALNADLKSIAQQQSNLSDYATQLTNQYQAQFTALNTLMATMNNNS
HHHHHCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QYLTQLFGGQNSAGALSNNK
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]