Click here to switch to the map view.

The map label for this gene is atpA1 [H]

Identifier: 161523284

GI number: 161523284

Start: 108901

End: 110442

Strand: Direct

Name: atpA1 [H]

Synonym: Bmul_0104

Alternate gene names: 161523284

Gene position: 108901-110442 (Clockwise)

Preceding gene: 161523283

Following gene: 161523285

Centisome position: 3.16

GC content: 63.81

Gene sequence:

>1542_bases
ATGCAACTCAATCCCTCTGAGATCAGCGAGCTGATCAAGAGCCGGATCCAGGGCCTTGAAGCGAGCGCAGACGTTCGCAA
CCAGGGCACCGTGATCTCCGTGACCGACGGTATCGTGCGCATCCACGGCCTGTCGGACGTGATGCAGGGCGAAATGCTCG
AGTTTCCGGGCAACACGTTCGGCCTCGCGCTGAACCTCGAGCGCGACTCGGTCGGCGCGGTGATTCTCGGCGAATACGAA
CACATCTCGGAAGGCGACGTCGTCAAGACGACGGGCCGCATTCTCGAAGTCCCGGTCGGTCCGGAACTCATCGGCCGCGT
GGTCGACGCGCTCGGCAACCCGATCGACGGCAAGGGCCCGGTCAACGCGAAGCTGACCGACGCGATCGAAAAGATCGCCC
CGGGCGTGATCTGGCGTAAGTCGGTGTCGCAGCCGGTGCAGACGGGCATCAAGTCGATCGACGCGATGGTGCCGATCGGC
CGCGGCCAGCGCGAGCTGATCATCGGCGACCGCCAGACCGGCAAGACCGCGGTGGCGCTCGACGCGATCATCAACCAGAA
GGGCAAGGACCTGATCTGTATCTACGTCGCGATCGGCCAGAAGGCTTCGTCGATCATGAACGTGGTGCGCAAGCTCGAAG
AAACGGGCGCGATGGCGTACACCATCGTCGTCGCCGCTTCGGCATCGGATTCCGCCGCGATGCAGTACCTCGCACCGTAC
GCGGGCTGCACGATGGGCGAATACTTCCGCGATCGCGGCCAGGACGCGCTGATCATTTACGACGACTTGACCAAGCAGGC
TTGGGCATACCGTCAGATCTCGCTGCTGCTGCGCCGTCCGCCGGGCCGTGAAGCGTACCCGGGCGACGTGTTCTATCTGC
ACTCGCGTCTGCTCGAGCGCGCGGCGCGCGTCTCGGAAGAGTACGTCGAGAAGTTCACGAACGGCGAAGTGAAGGGCAAG
AGCGGCTCGCTGACGGCACTGCCGGTCATCGAAACGCAGGCAGGCGACGTGACGGCGTTCGTTCCGACGAACGTGATCTC
GATTACCGACGGCCAGATCTTCCTGGAAACCGACCTGTTCAACGCAGGCATCCGCCCGGCAATCAACGCCGGCGTGTCGG
TGTCGCGTGTCGGTGGCGCCGCGCAGACGAAGGTCGTGAAGAAGCTGTCGGGCGGTATCCGTACCGACCTCGCGCAGTAC
CGTGAACTGGCCGCATTCGCGCAGTTCGCATCGGACCTCGACGAAGCGACCCGCAAGCAGCTCGAGCGCGGCCGCCGCGT
GACGGAACTGCTCAAGCAGCCGCAGTACCAGCCGCTGCAGGTGTGGGAACTGGCCGTGTCGCTGTTCTCCGCGAACAACG
GCTACCTCGACGATCTCGACGTGAAGCAGGTGCTGCCGTTCGAGAAGGGCCTGCGCGAATTCCTGAAGACGAGCCACGCT
GACCTCATCAAGCGCATCGAAGACACCAAGGATCTCTCGAAGGACGACGAAGGCGCGCTGCGCGCGGCGATCGAATCCTT
CAAGAAGTCGGGTGCCTATTGA

Upstream 100 bases:

>100_bases
TCGACACCTCGGTTCGCGCGCGCCTCGCATCGATGCAGGCTGCCTTGACCGCCTGAGCGCCACGCCGGCACGCAACAGAA
TTGACTATCAGGAGCGAATA

Downstream 100 bases:

>100_bases
TCCGCGAGTGACACACCGAGGCCGCGCGGGAGCTGAGGCGCCCGCGCCGCTTCGGTGAGCGGTGCATGAGCCCCGAGTCG
AGCGCTGACGCGCTAACCCG

Product: F0F1 ATP synthase subunit alpha

Products: NA

Alternate protein names: ATP synthase F1 sector subunit alpha 1; F-ATPase subunit alpha 1 [H]

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVILGEYE
HISEGDVVKTTGRILEVPVGPELIGRVVDALGNPIDGKGPVNAKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIG
RGQRELIIGDRQTGKTAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQYLAPY
AGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGK
SGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQY
RELAAFAQFASDLDEATRKQLERGRRVTELLKQPQYQPLQVWELAVSLFSANNGYLDDLDVKQVLPFEKGLREFLKTSHA
DLIKRIEDTKDLSKDDEGALRAAIESFKKSGAY

Sequences:

>Translated_513_residues
MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVILGEYE
HISEGDVVKTTGRILEVPVGPELIGRVVDALGNPIDGKGPVNAKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIG
RGQRELIIGDRQTGKTAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQYLAPY
AGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGK
SGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQY
RELAAFAQFASDLDEATRKQLERGRRVTELLKQPQYQPLQVWELAVSLFSANNGYLDDLDVKQVLPFEKGLREFLKTSHA
DLIKRIEDTKDLSKDDEGALRAAIESFKKSGAY
>Mature_513_residues
MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSDVMQGEMLEFPGNTFGLALNLERDSVGAVILGEYE
HISEGDVVKTTGRILEVPVGPELIGRVVDALGNPIDGKGPVNAKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIG
RGQRELIIGDRQTGKTAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQYLAPY
AGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGK
SGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQY
RELAAFAQFASDLDEATRKQLERGRRVTELLKQPQYQPLQVWELAVSLFSANNGYLDDLDVKQVLPFEKGLREFLKTSHA
DLIKRIEDTKDLSKDDEGALRAAIESFKKSGAY

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit [H]

COG id: COG0056

COG function: function code C; F0F1-type ATP synthase, alpha subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI50345984, Length=510, Percent_Identity=56.8627450980392, Blast_Score=588, Evalue=1e-168,
Organism=Homo sapiens, GI4757810, Length=510, Percent_Identity=56.8627450980392, Blast_Score=588, Evalue=1e-168,
Organism=Homo sapiens, GI32189394, Length=476, Percent_Identity=24.1596638655462, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI19913428, Length=324, Percent_Identity=28.3950617283951, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI19913426, Length=334, Percent_Identity=27.5449101796407, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI19913424, Length=319, Percent_Identity=26.9592476489028, Blast_Score=76, Evalue=6e-14,
Organism=Escherichia coli, GI1790172, Length=513, Percent_Identity=69.2007797270955, Blast_Score=739, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=281, Percent_Identity=30.2491103202847, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1790170, Length=377, Percent_Identity=24.4031830238727, Blast_Score=110, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71988063, Length=510, Percent_Identity=56.2745098039216, Blast_Score=578, Evalue=1e-165,
Organism=Caenorhabditis elegans, GI71988080, Length=510, Percent_Identity=56.2745098039216, Blast_Score=577, Evalue=1e-165,
Organism=Caenorhabditis elegans, GI71988074, Length=510, Percent_Identity=52.156862745098, Blast_Score=523, Evalue=1e-148,
Organism=Caenorhabditis elegans, GI17510931, Length=382, Percent_Identity=25.3926701570681, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17570191, Length=314, Percent_Identity=27.3885350318471, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI25144756, Length=453, Percent_Identity=24.2825607064018, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17509265, Length=50, Percent_Identity=62, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565854, Length=249, Percent_Identity=28.5140562248996, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71988068, Length=73, Percent_Identity=39.7260273972603, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6319370, Length=511, Percent_Identity=55.7729941291585, Blast_Score=582, Evalue=1e-167,
Organism=Saccharomyces cerevisiae, GI6322581, Length=426, Percent_Identity=25.8215962441315, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6319603, Length=382, Percent_Identity=27.2251308900524, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24658560, Length=510, Percent_Identity=57.0588235294118, Blast_Score=586, Evalue=1e-167,
Organism=Drosophila melanogaster, GI281361666, Length=316, Percent_Identity=26.8987341772152, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24646341, Length=316, Percent_Identity=26.8987341772152, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI17136796, Length=316, Percent_Identity=26.8987341772152, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24638766, Length=428, Percent_Identity=24.2990654205607, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI28574560, Length=436, Percent_Identity=23.6238532110092, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24583992, Length=319, Percent_Identity=26.6457680250784, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24583988, Length=248, Percent_Identity=28.6290322580645, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24583986, Length=248, Percent_Identity=28.6290322580645, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24583984, Length=248, Percent_Identity=28.6290322580645, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI20129479, Length=250, Percent_Identity=28, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: 9,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR005294
- InterPro:   IPR017458
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 55769; Mature: 55769

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSDVMQGEMLEFPGNTF
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEECHHHHHCCCCEECCCCEE
GLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELIGRVVDALGNPIDGKGP
EEEEEECCCCCCEEEEECCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCC
VNAKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVAL
CCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH
DAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQYLAPY
HHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHH
AGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLER
CCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLF
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEECCEEEEEECHH
NAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDEATRKQ
CCCCCHHHHCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERGRRVTELLKQPQYQPLQVWELAVSLFSANNGYLDDLDVKQVLPFEKGLREFLKTSHA
HHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
DLIKRIEDTKDLSKDDEGALRAAIESFKKSGAY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSDVMQGEMLEFPGNTF
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEECHHHHHCCCCEECCCCEE
GLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELIGRVVDALGNPIDGKGP
EEEEEECCCCCCEEEEECCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHCCCCCCCCC
VNAKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVAL
CCCHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH
DAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQYLAPY
HHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHH
AGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLER
CCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFLETDLF
HHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEECCEEEEEECHH
NAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDEATRKQ
CCCCCHHHHCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LERGRRVTELLKQPQYQPLQVWELAVSLFSANNGYLDDLDVKQVLPFEKGLREFLKTSHA
HHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
DLIKRIEDTKDLSKDDEGALRAAIESFKKSGAY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA