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The map label for this gene is fliM [H]

Identifier: 161523223

GI number: 161523223

Start: 47510

End: 48508

Strand: Reverse

Name: fliM [H]

Synonym: Bmul_0043

Alternate gene names: 161523223

Gene position: 48508-47510 (Counterclockwise)

Preceding gene: 161523224

Following gene: 161523222

Centisome position: 1.41

GC content: 63.46

Gene sequence:

>999_bases
ATGGGCCACGAAGAATTCATGTCGCAGGAGGAGGTCGATGCCCTCCTCAAAGGCGTCACGGGCGAATCCGACACGGTCGA
CGAAGAGCGCGACACGGCGGGCGTGCGCCCGTACAACATCGCGACGCAGGAGCGCATCGTCCGCGGCCGGATGCCCGGCC
TCGAGATCATCAACGATCGTTTCGCGCGGCTGCTGCGGATCGGCATCTTCAACTTCATGCGGCGCACGGCGGAAATCTCC
GTCAGCCAGGTGAAGGTGCAGAAGTACAGTGAATTCACGCGCAACCTGCCGATCCCGACGAACCTGAACCTCGTGCACGT
GAAGCCGCTGCGCGGCACGTCGCTGTTCGTGTTCGATCCGAACCTCGTGTTCTTCGTCGTCGACAACCTGTTCGGCGGCG
ACGGGCGCTTCCATACGCGCGTCGAGGGGCGCGACTTCACCGCGACCGAGCAGCGCATCATCGGCAAGCTGCTGAACCTC
GTGTTCGAGCACTACACGGTCGCGTGGAAGAGCGTGCGGCCGCTGCAGTTCGAATTCGTCCGCTCGGAAATGCACACGCA
GTTCGCGAACGTCGCGACGCCGAACGAGATCGTGATCGTCACGCAGTTCTCGATCGAGTTCGGGCCGACCGGCGGAACGC
TGCACATCTGCATGCCCTATTCGATGATCGAGCCGATCCGCGACGTGCTGAGCTCGCCGATCCAGGGCGAGGCGCTCGAA
GTCGACCGCCGCTGGGTACGCGTGCTGTCGCAGCAGGTGCAGGCCGCCGAAGTCGAGCTGACCGCGGATCTCGCCGAGAT
CCCGACGACCTTCGAGAAGATCCTGAACCTGCGCGCGGGCGACGTGCTGCCGCTCGACATCGCGGACACGATCACCGCGA
AGGTCGACGGCGTGCCGGTGATGGAATGCGGCTACGGGATTTTCAATGGCCAATATGCGCTGCGCGTGCAGAAGATGATC
AGCGCGAGCGACACGATGAAGGAAGGTGGATATGACTGA

Upstream 100 bases:

>100_bases
ATCGAGGAGCCGACGCAGCCGGGCAACCAGCGCACGAAGGTCGACGACGTGCTGTTTACCGAATTCGTCGTCCAGTAACG
CGGCCGCGAAAGGAGCGCGC

Downstream 100 bases:

>100_bases
GCTGAACCCGACGCCGGAACTCGACCCGCAGGCGCTCGCCGATGCCGCGCTGGCGGATTCCGCGGGCGCGCAGCAGGCGG
CCGACGCCGATCCGGCAATG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MGHEEFMSQEEVDALLKGVTGESDTVDEERDTAGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEIS
VSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNL
VFEHYTVAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
VDRRWVRVLSQQVQAAEVELTADLAEIPTTFEKILNLRAGDVLPLDIADTITAKVDGVPVMECGYGIFNGQYALRVQKMI
SASDTMKEGGYD

Sequences:

>Translated_332_residues
MGHEEFMSQEEVDALLKGVTGESDTVDEERDTAGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEIS
VSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNL
VFEHYTVAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
VDRRWVRVLSQQVQAAEVELTADLAEIPTTFEKILNLRAGDVLPLDIADTITAKVDGVPVMECGYGIFNGQYALRVQKMI
SASDTMKEGGYD
>Mature_331_residues
GHEEFMSQEEVDALLKGVTGESDTVDEERDTAGVRPYNIATQERIVRGRMPGLEIINDRFARLLRIGIFNFMRRTAEISV
SQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDPNLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLV
FEHYTVAWKSVRPLQFEFVRSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALEV
DRRWVRVLSQQVQAAEVELTADLAEIPTTFEKILNLRAGDVLPLDIADTITAKVDGVPVMECGYGIFNGQYALRVQKMIS
ASDTMKEGGYD

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=326, Percent_Identity=50.920245398773, Blast_Score=344, Evalue=4e-96,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37420; Mature: 37289

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHEEFMSQEEVDALLKGVTGESDTVDEERDTAGVRPYNIATQERIVRGRMPGLEIINDR
CCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
FARLLRIGIFNFMRRTAEISVSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECC
NLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLVFEHYTVAWKSVRPLQFEFV
CEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
HHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHH
VDRRWVRVLSQQVQAAEVELTADLAEIPTTFEKILNLRAGDVLPLDIADTITAKVDGVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECHHHHHHHHCCCCEE
MECGYGIFNGQYALRVQKMISASDTMKEGGYD
HHCCCCEECCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GHEEFMSQEEVDALLKGVTGESDTVDEERDTAGVRPYNIATQERIVRGRMPGLEIINDR
CHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
FARLLRIGIFNFMRRTAEISVSQVKVQKYSEFTRNLPIPTNLNLVHVKPLRGTSLFVFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECC
NLVFFVVDNLFGGDGRFHTRVEGRDFTATEQRIIGKLLNLVFEHYTVAWKSVRPLQFEFV
CEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RSEMHTQFANVATPNEIVIVTQFSIEFGPTGGTLHICMPYSMIEPIRDVLSSPIQGEALE
HHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCCHHH
VDRRWVRVLSQQVQAAEVELTADLAEIPTTFEKILNLRAGDVLPLDIADTITAKVDGVPV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECHHHHHHHHCCCCEE
MECGYGIFNGQYALRVQKMISASDTMKEGGYD
HHCCCCEECCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3519573; 9097040; 9278503; 2651416 [H]