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The map label for this gene is fecI [C]

Identifier: 161523200

GI number: 161523200

Start: 25082

End: 25951

Strand: Reverse

Name: fecI [C]

Synonym: Bmul_0020

Alternate gene names: 161523200

Gene position: 25951-25082 (Counterclockwise)

Preceding gene: 161523201

Following gene: 161523199

Centisome position: 0.75

GC content: 67.13

Gene sequence:

>870_bases
ATGACGAACGTCGATCCGGCGGACACGATGGCCGACGCGGCCGCGAGCTTCGATCCGCTGCGCCGAATGCTGATTCGCGT
CGCGTACCGGATGCTCGGGTCGGTCGCCGATGCGGAGGACGTCGTGCAGGACGCGTTCATACGCTGGATGGACGTCGACC
GCACCGGGATCCGCGTGCCTGAGGCGTTCCTGCGGCGGATGGTGATGCGGCTGTGCCTCGATCATCTGAAATCGGCGCGG
CATCGGCGCGAAACGTACGTCGGCCCGTGGCTGCCGGAGCCCGTCGTCGACGAAGACGAACAGGAAGACGTGACGTTGCC
GCTCATGCTTGCGCTCGAACGGCTCTCGCCGCTCGAGCGAGCGGCGTTTCTGCTGCACGACGTGTTCGGGCTCGAGTTCG
ACGAAGTCGCCGCGACGATCCAGCGCGAGCCCGCTGCGTGTCGGCAGCTCGCCGCGCGTGCACGCACGCATGTGCGTGAA
GCGCGGCCGCGGTTTCGGGTCGACAAGCAGCGCGGAATCGAACTCGCGGAAGCCTTCTTCGCGGCGTCGCGCAGCGGCGA
CATGCGCACGCTCGGCGCGATGCTCGCCGAAGACGTGAGCCTGCATTCGGACGGCGGCGGCAAGCGCACGGCCGCAGCCA
AACCGGTGTTCGGGTTCGAGCGCGTGATGAAGGTGCACACGCACCTGGCCGAGCTGTTCGCGACGCAGGCGTCGATGCTC
GTACGGGCAGGCTTCATCAACGGCCTGCCCGGTTTCGTCACGCGCGAAGCCGACGGCGAGTTGCAGACGACGGCGCTCGA
GATCGAGGACGGCAAGATCGTCGCGATCTACGTCGTGCGCAATCCGGACAAGCTGAAGCATCTGCATTGA

Upstream 100 bases:

>100_bases
TGATCAACGTGATCAACGGCTGGAACCGGCTGGCCGTCGGCTTCGGGCTATGGGTCGACCCGGCCGAGGCGAAGGCCGCC
GCCGCGAAGATGGTGGCCTG

Downstream 100 bases:

>100_bases
TGCGCGACGGTGCGGTGCCGAAGCGCACACACAATATGCAATGCGGAAAAGAAAAACGCCACGCGAACCTGCCGCGTGGC
GTTTGATCATTTGGCGAGCC

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family Protein; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma Subunit; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-70-Like Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; ECF Subfamily RNA Polymerase Sigma-; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTNVDPADTMADAAASFDPLRRMLIRVAYRMLGSVADAEDVVQDAFIRWMDVDRTGIRVPEAFLRRMVMRLCLDHLKSAR
HRRETYVGPWLPEPVVDEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEVAATIQREPAACRQLAARARTHVRE
ARPRFRVDKQRGIELAEAFFAASRSGDMRTLGAMLAEDVSLHSDGGGKRTAAAKPVFGFERVMKVHTHLAELFATQASML
VRAGFINGLPGFVTREADGELQTTALEIEDGKIVAIYVVRNPDKLKHLH

Sequences:

>Translated_289_residues
MTNVDPADTMADAAASFDPLRRMLIRVAYRMLGSVADAEDVVQDAFIRWMDVDRTGIRVPEAFLRRMVMRLCLDHLKSAR
HRRETYVGPWLPEPVVDEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEVAATIQREPAACRQLAARARTHVRE
ARPRFRVDKQRGIELAEAFFAASRSGDMRTLGAMLAEDVSLHSDGGGKRTAAAKPVFGFERVMKVHTHLAELFATQASML
VRAGFINGLPGFVTREADGELQTTALEIEDGKIVAIYVVRNPDKLKHLH
>Mature_288_residues
TNVDPADTMADAAASFDPLRRMLIRVAYRMLGSVADAEDVVQDAFIRWMDVDRTGIRVPEAFLRRMVMRLCLDHLKSARH
RRETYVGPWLPEPVVDEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEVAATIQREPAACRQLAARARTHVREA
RPRFRVDKQRGIELAEAFFAASRSGDMRTLGAMLAEDVSLHSDGGGKRTAAAKPVFGFERVMKVHTHLAELFATQASMLV
RAGFINGLPGFVTREADGELQTTALEIEDGKIVAIYVVRNPDKLKHLH

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32402; Mature: 32271

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVDPADTMADAAASFDPLRRMLIRVAYRMLGSVADAEDVVQDAFIRWMDVDRTGIRVP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCH
EAFLRRMVMRLCLDHLKSARHRRETYVGPWLPEPVVDEDEQEDVTLPLMLALERLSPLER
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHH
AAFLLHDVFGLEFDEVAATIQREPAACRQLAARARTHVREARPRFRVDKQRGIELAEAFF
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AASRSGDMRTLGAMLAEDVSLHSDGGGKRTAAAKPVFGFERVMKVHTHLAELFATQASML
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRAGFINGLPGFVTREADGELQTTALEIEDGKIVAIYVVRNPDKLKHLH
HHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC
>Mature Secondary Structure 
TNVDPADTMADAAASFDPLRRMLIRVAYRMLGSVADAEDVVQDAFIRWMDVDRTGIRVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCH
EAFLRRMVMRLCLDHLKSARHRRETYVGPWLPEPVVDEDEQEDVTLPLMLALERLSPLER
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHH
AAFLLHDVFGLEFDEVAATIQREPAACRQLAARARTHVREARPRFRVDKQRGIELAEAFF
HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AASRSGDMRTLGAMLAEDVSLHSDGGGKRTAAAKPVFGFERVMKVHTHLAELFATQASML
HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRAGFINGLPGFVTREADGELQTTALEIEDGKIVAIYVVRNPDKLKHLH
HHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA