| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161523199
Identifier: 161523199
GI number: 161523199
Start: 21939
End: 24131
Strand: Reverse
Name: 161523199
Synonym: Bmul_0019
Alternate gene names: NA
Gene position: 24131-21939 (Counterclockwise)
Preceding gene: 161523200
Following gene: 161523198
Centisome position: 0.7
GC content: 63.06
Gene sequence:
>2193_bases ATGCCGGATATCAGCGCTGCCATTCGCGGCGGCTTGCTTCAGCAGGACCGTTTACTCAAATTAGACACGCCGCTGGGCGC AGACCTGCTTGCGGTACAGCGTGCAGCAGGCCGATCGCGCATCGGACGGGACTACTCGTTCACGCTTGACGTGGTATCGG GCAATGATCGCCTCGAACTCAAGAAACTGATCGCCCAGCCGGCGACGCTGTGGATTGAGCAGGCGAACAAGTCCTACCGG CCAGTCAATGGTTATGTGTACACCGTTCGGCGTCTTGGAGCGAACGGCGGACTCACTACCTATCAGCTGGAGTTGCGCGC GTGGATGCATCTGCTTCGGTTTCGCCGGGACCAGAAGATCTGGATCGACCGGAACGCGGAGGAGATCATTTCCGATGTGC TGAGTGTGCATCCGGAAGCGAGAGGGCGATTTCGCTTTGCTCTGTCGCAGCCTTTGTTGAACCGATCGTTCACGCGGCAA AGTGAAACGGACTGGAATTTCGTGCATCGGCTGATGGAGGACGAGGGGCTCTATTGCACGTGGCAGCAGGCCGACGACGG CAAGTCGCATACGCTCGTGATCACCGATAACCTGCAGGCGTTTGCGCCGCTGTCGCCGGAGACCGTGCGTTTCTATCGCG GCGGCGCGGCAAGCGAGACCGATGCCTTTACACAATGGTCGGGCACGCGCACGCTGCAGAGCGTGACGCGCACGACGCGT ACGTTCGACTACAAGAATCCTTCTCAGCCGTCGAATCCGAAGGGCACGTCGCTGCCGACGATGGGCGGCCAGGGCGAGCT GCCCGATCAGCTCGAGGTGTACGAGTACACCGGCGCCTACACGTATCTGGATCAGTCGCGCGGCGACCACCTGACGAAGA TCAGGATGGAGGAGTGGGAATCGCAGGCCAAGCGCTTTCATGGCGCGGGCGGCGTGCGTGCTATCGATGCGGGCCGGCGC TTTACGCTGATAGACCATCCGGAACACGATCGCGATCCGGCGGACCAGCGCGAATTCGCGACGATCGAAGTCGCATGGTG GATCGAGAACAACCTGCCAGTGTCCGCGAGCGATTCGAATTTTCCGCACAGCCTTGCGTCGTCGCTCGCACGGGTACGCG CTCGATACGGGGACATGCGAGAACTTCAGGTGCCTCATCCCGACGGTTCGGTCGGCTTCTATCTCGTCGAAGTCGAGGCG CAGCGCACGAGCGTGCCGTATCGCAGCCCGTTCGAACACGCGAAGCCGAAGATGCACCTCGAGACGGCGATCGTCGTTGG TCCGCAGGGCGAGGAGGTCTATACCGACGAGTTGAACCGGATTCGCGTGCAGTTCGTGTGGGACCGCATCAATCCGGGCA ACGAGAACGCATCGTGCTGGGTGCGTGTGGTGCAGTCGGACACCGGCGGCGGCTACGGCGGCGTGCACGTGCCACGAATC GGCGAGGAAGTGCTGATCGACTACGTCGGCGGCGACTGCGACCGGCCGCTTGCGGTCGGACGCGTGTACAACGGCGCGAA CAAGCCGCAGTGGCATAGCGACGGCATTCTGTCCGGATACCGATCGAAAGAATACGCGGGCGGCGGCTACAACCAGCTCG TGATGGACGACGCCACCGGGCAGAACCGCGTGCAACTGATGAGCAGCAGCGCGAACAGCCTGCTGCATCTGGGCTACATC ATCGATCAGAACGGCAATGCGCGCGGCTCGTATCTCGGCAGCGGGTTCGATCTGCGCTCGGATGCATACGGTGCGGTGCG TGCGAGTCAGGGGCTGTACGTGACCACGCATCCGAAGGCGGCGAACAGCCAGCCGCTCGACGTGAAGGAAGCGCAGCAGC AGCTCGTGACCGGCGAGAGCCTGATCGAGGCGATGTCGGGCGTGAGCGAACAGCATCAGGCGGAAAGCCTGAAGGAAGCG CACGACACGATGCGCGCGTTCGCGGACGCGACGCAAAGCAGCGTGTCGGGCAATGCGTCGGGCGGGCGTACTGCGGGCGG TGGAACGGGCAGCGCGAACGCATTCAAGGAACCGGTGATGCTGTTCGGCAGCCCGTCGGGGATCGCGATGTCGACGCAGC AGTCGGTGCACATGGTCGCGAACGATCACGTGAACGTCGCGAGCGGCCAGAGCGTGCACGTGGCCGCAGGTGTCACGGGG CGGCGCTATGGAGCCAATGCGGGGTCGGCATAA
Upstream 100 bases:
>100_bases GATTGACCTTAACGTGCTGATTAGACGGTAAAATCCCGCGCGGTTGTACGACAGACACCATCCGAGGGTGCTGAAATAAA AAAAGGGCTGCATCGTGAAC
Downstream 100 bases:
>100_bases GGGCGCCACTTGAGGGGCGGCACATAGGCGCCAGTCCAAGGGCGGCGTAATGGCGCCACGTTAGGGGCGGCGCATAGGCG CCAGCAGCATCAGGGCGAGA
Product: type VI secretion system Vgr family protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; Rhs Family Protein; VgrG Protein; VGR-Related Type VI Secretion System Protein; Rhs Element Vgr Related Protein; VgrG Family T6SS G; Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Rhs Element Vgr-Related Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MPDISAAIRGGLLQQDRLLKLDTPLGADLLAVQRAAGRSRIGRDYSFTLDVVSGNDRLELKKLIAQPATLWIEQANKSYR PVNGYVYTVRRLGANGGLTTYQLELRAWMHLLRFRRDQKIWIDRNAEEIISDVLSVHPEARGRFRFALSQPLLNRSFTRQ SETDWNFVHRLMEDEGLYCTWQQADDGKSHTLVITDNLQAFAPLSPETVRFYRGGAASETDAFTQWSGTRTLQSVTRTTR TFDYKNPSQPSNPKGTSLPTMGGQGELPDQLEVYEYTGAYTYLDQSRGDHLTKIRMEEWESQAKRFHGAGGVRAIDAGRR FTLIDHPEHDRDPADQREFATIEVAWWIENNLPVSASDSNFPHSLASSLARVRARYGDMRELQVPHPDGSVGFYLVEVEA QRTSVPYRSPFEHAKPKMHLETAIVVGPQGEEVYTDELNRIRVQFVWDRINPGNENASCWVRVVQSDTGGGYGGVHVPRI GEEVLIDYVGGDCDRPLAVGRVYNGANKPQWHSDGILSGYRSKEYAGGGYNQLVMDDATGQNRVQLMSSSANSLLHLGYI IDQNGNARGSYLGSGFDLRSDAYGAVRASQGLYVTTHPKAANSQPLDVKEAQQQLVTGESLIEAMSGVSEQHQAESLKEA HDTMRAFADATQSSVSGNASGGRTAGGGTGSANAFKEPVMLFGSPSGIAMSTQQSVHMVANDHVNVASGQSVHVAAGVTG RRYGANAGSA
Sequences:
>Translated_730_residues MPDISAAIRGGLLQQDRLLKLDTPLGADLLAVQRAAGRSRIGRDYSFTLDVVSGNDRLELKKLIAQPATLWIEQANKSYR PVNGYVYTVRRLGANGGLTTYQLELRAWMHLLRFRRDQKIWIDRNAEEIISDVLSVHPEARGRFRFALSQPLLNRSFTRQ SETDWNFVHRLMEDEGLYCTWQQADDGKSHTLVITDNLQAFAPLSPETVRFYRGGAASETDAFTQWSGTRTLQSVTRTTR TFDYKNPSQPSNPKGTSLPTMGGQGELPDQLEVYEYTGAYTYLDQSRGDHLTKIRMEEWESQAKRFHGAGGVRAIDAGRR FTLIDHPEHDRDPADQREFATIEVAWWIENNLPVSASDSNFPHSLASSLARVRARYGDMRELQVPHPDGSVGFYLVEVEA QRTSVPYRSPFEHAKPKMHLETAIVVGPQGEEVYTDELNRIRVQFVWDRINPGNENASCWVRVVQSDTGGGYGGVHVPRI GEEVLIDYVGGDCDRPLAVGRVYNGANKPQWHSDGILSGYRSKEYAGGGYNQLVMDDATGQNRVQLMSSSANSLLHLGYI IDQNGNARGSYLGSGFDLRSDAYGAVRASQGLYVTTHPKAANSQPLDVKEAQQQLVTGESLIEAMSGVSEQHQAESLKEA HDTMRAFADATQSSVSGNASGGRTAGGGTGSANAFKEPVMLFGSPSGIAMSTQQSVHMVANDHVNVASGQSVHVAAGVTG RRYGANAGSA >Mature_729_residues PDISAAIRGGLLQQDRLLKLDTPLGADLLAVQRAAGRSRIGRDYSFTLDVVSGNDRLELKKLIAQPATLWIEQANKSYRP VNGYVYTVRRLGANGGLTTYQLELRAWMHLLRFRRDQKIWIDRNAEEIISDVLSVHPEARGRFRFALSQPLLNRSFTRQS ETDWNFVHRLMEDEGLYCTWQQADDGKSHTLVITDNLQAFAPLSPETVRFYRGGAASETDAFTQWSGTRTLQSVTRTTRT FDYKNPSQPSNPKGTSLPTMGGQGELPDQLEVYEYTGAYTYLDQSRGDHLTKIRMEEWESQAKRFHGAGGVRAIDAGRRF TLIDHPEHDRDPADQREFATIEVAWWIENNLPVSASDSNFPHSLASSLARVRARYGDMRELQVPHPDGSVGFYLVEVEAQ RTSVPYRSPFEHAKPKMHLETAIVVGPQGEEVYTDELNRIRVQFVWDRINPGNENASCWVRVVQSDTGGGYGGVHVPRIG EEVLIDYVGGDCDRPLAVGRVYNGANKPQWHSDGILSGYRSKEYAGGGYNQLVMDDATGQNRVQLMSSSANSLLHLGYII DQNGNARGSYLGSGFDLRSDAYGAVRASQGLYVTTHPKAANSQPLDVKEAQQQLVTGESLIEAMSGVSEQHQAESLKEAH DTMRAFADATQSSVSGNASGGRTAGGGTGSANAFKEPVMLFGSPSGIAMSTQQSVHMVANDHVNVASGQSVHVAAGVTGR RYGANAGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80317; Mature: 80186
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDISAAIRGGLLQQDRLLKLDTPLGADLLAVQRAAGRSRIGRDYSFTLDVVSGNDRLEL CCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH KKLIAQPATLWIEQANKSYRPVNGYVYTVRRLGANGGLTTYQLELRAWMHLLRFRRDQKI HHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCEE WIDRNAEEIISDVLSVHPEARGRFRFALSQPLLNRSFTRQSETDWNFVHRLMEDEGLYCT EEECCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEE WQQADDGKSHTLVITDNLQAFAPLSPETVRFYRGGAASETDAFTQWSGTRTLQSVTRTTR EECCCCCCCEEEEEECCCCEECCCCCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHH TFDYKNPSQPSNPKGTSLPTMGGQGELPDQLEVYEYTGAYTYLDQSRGDHLTKIRMEEWE EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEHHHHHHH SQAKRFHGAGGVRAIDAGRRFTLIDHPEHDRDPADQREFATIEVAWWIENNLPVSASDSN HHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC FPHSLASSLARVRARYGDMRELQVPHPDGSVGFYLVEVEAQRTSVPYRSPFEHAKPKMHL CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEHHCCCCCCCCHHHCCCCEEE ETAIVVGPQGEEVYTDELNRIRVQFVWDRINPGNENASCWVRVVQSDTGGGYGGVHVPRI EEEEEECCCCCEEHHCCHHEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEECCCC GEEVLIDYVGGDCDRPLAVGRVYNGANKPQWHSDGILSGYRSKEYAGGGYNQLVMDDATG CHHHHHEECCCCCCCCEEEHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC QNRVQLMSSSANSLLHLGYIIDQNGNARGSYLGSGFDLRSDAYGAVRASQGLYVTTHPKA CCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC ANSQPLDVKEAQQQLVTGESLIEAMSGVSEQHQAESLKEAHDTMRAFADATQSSVSGNAS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGRTAGGGTGSANAFKEPVMLFGSPSGIAMSTQQSVHMVANDHVNVASGQSVHVAAGVTG CCCCCCCCCCCCCHHCCCEEEEECCCCCEEECCCCEEEEECCCEEECCCCEEEEEECCCC RRYGANAGSA CCCCCCCCCC >Mature Secondary Structure PDISAAIRGGLLQQDRLLKLDTPLGADLLAVQRAAGRSRIGRDYSFTLDVVSGNDRLEL CCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH KKLIAQPATLWIEQANKSYRPVNGYVYTVRRLGANGGLTTYQLELRAWMHLLRFRRDQKI HHHHCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCEE WIDRNAEEIISDVLSVHPEARGRFRFALSQPLLNRSFTRQSETDWNFVHRLMEDEGLYCT EEECCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEE WQQADDGKSHTLVITDNLQAFAPLSPETVRFYRGGAASETDAFTQWSGTRTLQSVTRTTR EECCCCCCCEEEEEECCCCEECCCCCCCEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHH TFDYKNPSQPSNPKGTSLPTMGGQGELPDQLEVYEYTGAYTYLDQSRGDHLTKIRMEEWE EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEHHHHHHH SQAKRFHGAGGVRAIDAGRRFTLIDHPEHDRDPADQREFATIEVAWWIENNLPVSASDSN HHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC FPHSLASSLARVRARYGDMRELQVPHPDGSVGFYLVEVEAQRTSVPYRSPFEHAKPKMHL CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEEEEHHCCCCCCCCHHHCCCCEEE ETAIVVGPQGEEVYTDELNRIRVQFVWDRINPGNENASCWVRVVQSDTGGGYGGVHVPRI EEEEEECCCCCEEHHCCHHEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEECCCC GEEVLIDYVGGDCDRPLAVGRVYNGANKPQWHSDGILSGYRSKEYAGGGYNQLVMDDATG CHHHHHEECCCCCCCCEEEHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC QNRVQLMSSSANSLLHLGYIIDQNGNARGSYLGSGFDLRSDAYGAVRASQGLYVTTHPKA CCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC ANSQPLDVKEAQQQLVTGESLIEAMSGVSEQHQAESLKEAHDTMRAFADATQSSVSGNAS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGRTAGGGTGSANAFKEPVMLFGSPSGIAMSTQQSVHMVANDHVNVASGQSVHVAAGVTG CCCCCCCCCCCCCHHCCCEEEEECCCCCEEECCCCEEEEECCCEEECCCCEEEEEECCCC RRYGANAGSA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA