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The map label for this gene is ytmP [H]

Identifier: 161509966

GI number: 161509966

Start: 1869722

End: 1870522

Strand: Reverse

Name: ytmP [H]

Synonym: USA300HOU_1739

Alternate gene names: 161509966

Gene position: 1870522-1869722 (Counterclockwise)

Preceding gene: 161509968

Following gene: 161509965

Centisome position: 65.11

GC content: 34.83

Gene sequence:

>801_bases
GTGGACGAGTTGGAGCAGTTTTATCAATTAGGGTGGACACTTGATTCAGCAGGTGGTGCATCTGGTGAAGCATATATGGC
TGAACAAGATGGACAAAAGTTGTTTTTAAAACGAAATTCAAATCCATTTATTGCGGCATTATCAGCAGAAGGTATTGTGC
CCAAATTAGTATGGACGAAACGCATAGAAACAGGCGAGGTTGTTACAGCACAACATTGGAAAAATGGGCGTGAACTATCT
TCAAACGAAATGAAGCAAACAAGAGTTGCACATTTATTAAAGAAGATACACAATTCTAGACCTTTATTAAGTATGTTAAA
GCGTATGGAAATGGAACCTATTACTCCTGAGATTATGCTTAATAAAATTAATGCCTCTTTATCAAGAGAAGTTTTAACAC
ATCATATTGTGAGAAAATCATTAACCTATTTAGAAGAGCATATACCGAGTTTAGATTCGCGTTTTTTCACTGTTGTACAT
GGTGATGTGAATCATAATAATTGGTTATTATCCGATCGAGATGAACTATTTTTAGTTGATTGGGAAGGTGCAATGATTGC
AGACCCGGCAATTGATATCGGAATGCTGCTTTACAACTATGTTCCACAACAACAATGGTCTGAATGGCTTGAAACATATG
GTGTTCAAGAGAGCTTGAATTTAAATAAACGTATGAAATGGTATACGGTAATTCAATCTATAGGTCTTGTTCAATGGTAT
GAAGAGCAAAAAAGATATAAGGATATGAACACTTGGCTTAAATTCCTAAATGAAGTTATGAATAGTAACATGTTTATTTA
A

Upstream 100 bases:

>100_bases
ATTATCTGGACATAATATTTGTACCAGTATGGTGTTATAAATTAGAATATATGGCTCTTGAAAAACCTATTTCTAGAGCC
ATTTTCTAATTGAAAGTGAG

Downstream 100 bases:

>100_bases
GAGGAGAATAAAATATGAGAGTTCGATACAAACCATGGGCTGAAGATTATTTAAAAGATCATCCTGAATTGGTTGACATG
GACGGTCAACATGCAGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDELEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELS
SNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVH
GDVNHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWY
EEQKRYKDMNTWLKFLNEVMNSNMFI

Sequences:

>Translated_266_residues
MDELEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELS
SNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVH
GDVNHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWY
EEQKRYKDMNTWLKFLNEVMNSNMFI
>Mature_266_residues
MDELEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTKRIETGEVVTAQHWKNGRELS
SNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIMLNKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVH
GDVNHNNWLLSDRDELFLVDWEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWY
EEQKRYKDMNTWLKFLNEVMNSNMFI

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 31110; Mature: 31110

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTK
CCHHHHHHHHCCEEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHH
RIETGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIML
CCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
NKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDVNHNNWLLSDRDELFLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEE
WEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWY
CCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
EEQKRYKDMNTWLKFLNEVMNSNMFI
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDELEQFYQLGWTLDSAGGASGEAYMAEQDGQKLFLKRNSNPFIAALSAEGIVPKLVWTK
CCHHHHHHHHCCEEECCCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCHHHHHHH
RIETGEVVTAQHWKNGRELSSNEMKQTRVAHLLKKIHNSRPLLSMLKRMEMEPITPEIML
CCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
NKINASLSREVLTHHIVRKSLTYLEEHIPSLDSRFFTVVHGDVNHNNWLLSDRDELFLVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCEEEEE
WEGAMIADPAIDIGMLLYNYVPQQQWSEWLETYGVQESLNLNKRMKWYTVIQSIGLVQWY
CCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHH
EEQKRYKDMNTWLKFLNEVMNSNMFI
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]