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The map label for this gene is scpA [H]

Identifier: 161509723

GI number: 161509723

Start: 1612976

End: 1613731

Strand: Reverse

Name: scpA [H]

Synonym: USA300HOU_1496

Alternate gene names: 161509723

Gene position: 1613731-1612976 (Counterclockwise)

Preceding gene: 161509725

Following gene: 161509722

Centisome position: 56.17

GC content: 30.56

Gene sequence:

>756_bases
ATGACGCAATACGAGGTAGATATTATGTATGAAGTTAAATTAGATGCTTTCAATGGACCATTAGATTTATTGCTGCATCT
TATCCAAAAATTTGAAATAGATATTTATGATATTCCTATGCAAGCATTAACAGAGCAGTATATGCAGTACGTTCATGCAA
TGAAACAGCTTGAAATTAATATTGCAAGTGAATACCTAGTATTAGCGTCAGAACTCTTAATGATTAAAAGTAAGATGCTA
TTACCACAATCAACATCAGATATGGATGTTGATGATGACCCACGGGAAGATTTAGTTGGGCGTTTAATAGAATATCAAAA
TTATAAAGAATATACTGCTATTTTAAATGACATGAAAGAAGAAAGAGATTTTTATTTTACAAAAAGACCGACAGATTTAT
CTCATTTGGAAACAGATGAATCTTGGGATCCAAATCATACGATTGATTTAACTGAATTAATTGTAGCTTATCAAAGAGTT
AAAAATAGAGTTGAGTTAAATACACCTAAATCTGTTGAAATCCGAAAAGAGACATTTACCATTCAACAAGCTACAGAACA
AGTGACATCGAGATTGAAAGATAAAGATCATTTTAACTTCTTTAGTCTGTTTACGTTTTCTGAGCCAATTGAACAAGTAG
TCACTCACTTTTTAGCTATTTTAGAGATGTCAAAAGCAGGAATAATTAATATTGAGCAGCAACGTAATTTTGAAGATATT
AACATTATTAGAGGAGTGAACTACCATTTTGGATAA

Upstream 100 bases:

>100_bases
TTGATAATAGAAATTTATCAGTGCCTGTTGCATTTTGTTATCACCCCAATTTAAAAGTAAGTTATTTTCATGCTATAATA
TTTTAGAGAATTATGCACAT

Downstream 100 bases:

>100_bases
TCATGGTATATTAGAGTCGCTTTTATTTACAGCTGGCGATGAAGGTTTAGATGAAAAACAACTATTAGAAATATTAGATA
TGTCGAAAGACCAACTCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEINIASEYLVLASELLMIKSKML
LPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRV
KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
NIIRGVNYHFG

Sequences:

>Translated_251_residues
MTQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEINIASEYLVLASELLMIKSKML
LPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRV
KNRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
NIIRGVNYHFG
>Mature_250_residues
TQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEINIASEYLVLASELLMIKSKMLL
PQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKEERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVK
NRVELNTPKSVEIRKETFTIQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDIN
IIRGVNYHFG

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29651; Mature: 29520

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH
IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
HHCEEEECCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCCCCEEEHHHHHH
IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCHH
NIIRGVNYHFG
HHEECCCCCCC
>Mature Secondary Structure 
TQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
CCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH
IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
HHCEEEECCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCCCCEEEHHHHHH
IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCHH
NIIRGVNYHFG
HHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA