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The map label for this gene is ywoC [H]

Identifier: 161508451

GI number: 161508451

Start: 218690

End: 219247

Strand: Reverse

Name: ywoC [H]

Synonym: USA300HOU_0200

Alternate gene names: 161508451

Gene position: 219247-218690 (Counterclockwise)

Preceding gene: 161508452

Following gene: 161508450

Centisome position: 7.63

GC content: 35.13

Gene sequence:

>558_bases
ATGATTAATTTTAATAAAACCGCTTTAGTGTTAATCGACCTGCAAGAAGGTATTCTTAAAATGGATTATGCCCCATATAC
AGCTGAAAATGTCGTTCAAAACGCTAATAAATTAATAGATGTTTTTAGAAAAAACAATGGCTTTATCGCTTTTGTTCGCG
TGAATTTCTATGATGGTAAAGATGTATTGCAACCAAATGCAATGATCTCATTACCACCAAAAGAAGGCGACGACTACAGT
CGTTTCCATCATTTATTAGACAAGAGAGATGACGATTTTGTCATAGACAAACGACATTTTAGTGCATTTGTAGGAACAGA
TTTGGACTTACAATTGCGACGTCGAGGAATTGATACGATTGTTCTTGGTGGTGTCGCAACGCATATTGGCGTAGATACGA
CAGCGCGAGATGCCTATCAATTAAACTACAATCAGTTTTTTGTTACAGATATGATGAGTGCACAAAACGAAACGCTACAT
CAATTTCCAATAGATAATGTATTCCCATTGATGGGACAAACAATAACTACAAACGACTTTCTAAATATATTGAACTAA

Upstream 100 bases:

>100_bases
TATCGCTAAAGCTTTTTCACAACAAAATAAATAATTTCATCGTATACAGGGTATAAGTTTAAGCGAATACTTTATTAAAC
GAATAGGACTCTGATATAAG

Downstream 100 bases:

>100_bases
ACATATACTTCCCCCCTTCGATCATGTTGAGGGGGATCTTTATTTCACAAAGTATTAATACGTCGGGTTGTCTAACCTTC
TATATTTAACATATTCTATA

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
QFPIDNVFPLMGQTITTNDFLNILN

Sequences:

>Translated_185_residues
MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
QFPIDNVFPLMGQTITTNDFLNILN
>Mature_185_residues
MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPKEGDDYS
RFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLH
QFPIDNVFPLMGQTITTNDFLNILN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=189, Percent_Identity=40.2116402116402, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21151; Mature: 21151

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
CCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
CCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEE
VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
EECCCHHHCCCCCCCCCEEEECCCEEEEEHHHHCCCCCHHHCCCCCHHHHCCCEECCHHH
LNILN
HHHCC
>Mature Secondary Structure
MINFNKTALVLIDLQEGILKMDYAPYTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGK
CCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCC
DVLQPNAMISLPPKEGDDYSRFHHLLDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTI
CCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCEE
VLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDF
EECCCHHHCCCCCCCCCEEEECCCEEEEEHHHHCCCCCHHHCCCCCHHHHCCCEECCHHH
LNILN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]