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The map label for this gene is yrkD [H]

Identifier: 161508350

GI number: 161508350

Start: 92655

End: 92915

Strand: Reverse

Name: yrkD [H]

Synonym: USA300HOU_0091

Alternate gene names: 161508350

Gene position: 92915-92655 (Counterclockwise)

Preceding gene: 161508353

Following gene: 161508349

Centisome position: 3.23

GC content: 31.03

Gene sequence:

>261_bases
ATGAATTATGATAAAAAAATGATTAATCGTATTAATAGAATACAAGGGCAACTAAATGGAATTATTAAAATGATGGAGGA
AGGAAAAGACTGTAAAGATGTCATTACACAAATAAGTGCATCAAAGAGTTCACTCCAACGCTTGATGGGTATCATTATTA
GTGAGAATTTAATAGAATGTGTAAAAGCAGCTGCGGATGATGAAGAAAGCTCCCAAGAGTTAATTAATGAAGCTGTAAAC
TTATTGGTGAAAAGTAAGTAA

Upstream 100 bases:

>100_bases
AACAGTTGGATGGAACTTGTCAAATACCTCTAGGGGTATTTGACACATTTGTGTTTATCTATTAATATATTTTTATTCAA
TTAAAAGTGGAGGTATGACT

Downstream 100 bases:

>100_bases
TGGATATTGTTAATATAGTTATCATGTTACTCATTGGGGTATTCGGTGGGTTCATATCTGGTCTAGTAGGCGTAGGTGGT
GCTATCATTATTTATCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIECVKAAADDEESSQELINEAVN
LLVKSK

Sequences:

>Translated_86_residues
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIECVKAAADDEESSQELINEAVN
LLVKSK
>Mature_86_residues
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIECVKAAADDEESSQELINEAVN
LLVKSK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9641; Mature: 9641

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIEC
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKAAADDEESSQELINEAVNLLVKSK
HHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQISASKSSLQRLMGIIISENLIEC
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKAAADDEESSQELINEAVNLLVKSK
HHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]