Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 160903336

GI number: 160903336

Start: 2112625

End: 2113527

Strand: Direct

Name: rsgA [H]

Synonym: Pmob_1907

Alternate gene names: 160903336

Gene position: 2112625-2113527 (Clockwise)

Preceding gene: 160903335

Following gene: 160903337

Centisome position: 97.38

GC content: 32.45

Gene sequence:

>903_bases
ATGAGTTGGAGAAAGGGTATAGTTGTTAGATTTCATTCGGATATGGTAACCGTTCAAGATTTGGAAAGTAATCAAAAAAT
TAACTGCTTTCTCCCTGGTAGATTTAAATTACAGAAGATTAGGCCCATTGTTGGCGATTATGTAGAGTATTCTAAGGACC
AACAAAATGCTTATGGAAGAATCGAAAACATTTTAGAGAGAAAAAATGAATTATACAGACCTAGAGTAGCTAACTTGGAT
CAACTAGTTTTAGTTACATCAATTAAAGAGCCTCGAGTAGATTTGATAGTAGTCGATAAAATTATAGTTCTCGCTGAAAA
AGAGAAGCTTGATGTAGTCATAGTGTTAAACAAAACGGATTTGCTTGGTAGTGACGAAGAAAAAAGAGAAATGGAAAGAT
TTATAGAAATATATGGTAAAATTTATCCTGTGATTCCTACATCCAAAATAACGAAAAATAATTTAGATATATTAAAATCA
TATTTAAAAAACAAAGTATCAACCTTTGCAGGTCCTTCTGGAGTTGGAAAGTCCAGTTTATTGAATGTTTTAGATCCAAA
ATTGAAACTTAGAGAAGGAGAAATCTCCAAAAAATTAGGTAGAGGTAAACACACAACAACTTATGCTGAACTGCTTTATT
TTGATTTTGGAGGATATATAGTCGACACACCAGGTTTTTCGAGTTTAGAGCTAAGGGGAATAAAAAAAGATGAAGTAAGG
CGTTATTTCAGAGAATTTTTGGAATTTGACGGTTTTTGCCAGTTTTCTAATTGTTCCCATACGGTTGAACCTGGATGTGC
AATTAAAGAGGCTGTAGAGAACGGACAGATTTCATTGAGTAGGTATACCAATTATTGTCAAATATACGAAGAAATAGAAG
ATAGTTCACTAAAATTACAATAG

Upstream 100 bases:

>100_bases
AAGAAAATGATGTGGTATTGAACATGTCTCCAACACCAGGAAATAATTATAGTGGAGAAAGGGTGATTCTCTATGTCGGT
AAATATGAAGGGAGTAATCA

Downstream 100 bases:

>100_bases
GGGTGTTTCAGTTTGATAAAAATATATCCTTCCATTTTAGCTGCTGATTTTTTGAATTTAGCTCAAGAGGTAGAGAAAGT
TTCTAAAGATGCTGATGGAA

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSWRKGIVVRFHSDMVTVQDLESNQKINCFLPGRFKLQKIRPIVGDYVEYSKDQQNAYGRIENILERKNELYRPRVANLD
QLVLVTSIKEPRVDLIVVDKIIVLAEKEKLDVVIVLNKTDLLGSDEEKREMERFIEIYGKIYPVIPTSKITKNNLDILKS
YLKNKVSTFAGPSGVGKSSLLNVLDPKLKLREGEISKKLGRGKHTTTYAELLYFDFGGYIVDTPGFSSLELRGIKKDEVR
RYFREFLEFDGFCQFSNCSHTVEPGCAIKEAVENGQISLSRYTNYCQIYEEIEDSSLKLQ

Sequences:

>Translated_300_residues
MSWRKGIVVRFHSDMVTVQDLESNQKINCFLPGRFKLQKIRPIVGDYVEYSKDQQNAYGRIENILERKNELYRPRVANLD
QLVLVTSIKEPRVDLIVVDKIIVLAEKEKLDVVIVLNKTDLLGSDEEKREMERFIEIYGKIYPVIPTSKITKNNLDILKS
YLKNKVSTFAGPSGVGKSSLLNVLDPKLKLREGEISKKLGRGKHTTTYAELLYFDFGGYIVDTPGFSSLELRGIKKDEVR
RYFREFLEFDGFCQFSNCSHTVEPGCAIKEAVENGQISLSRYTNYCQIYEEIEDSSLKLQ
>Mature_299_residues
SWRKGIVVRFHSDMVTVQDLESNQKINCFLPGRFKLQKIRPIVGDYVEYSKDQQNAYGRIENILERKNELYRPRVANLDQ
LVLVTSIKEPRVDLIVVDKIIVLAEKEKLDVVIVLNKTDLLGSDEEKREMERFIEIYGKIYPVIPTSKITKNNLDILKSY
LKNKVSTFAGPSGVGKSSLLNVLDPKLKLREGEISKKLGRGKHTTTYAELLYFDFGGYIVDTPGFSSLELRGIKKDEVRR
YFREFLEFDGFCQFSNCSHTVEPGCAIKEAVENGQISLSRYTNYCQIYEEIEDSSLKLQ

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=247, Percent_Identity=38.4615384615385, Blast_Score=165, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34513; Mature: 34382

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRKGIVVRFHSDMVTVQDLESNQKINCFLPGRFKLQKIRPIVGDYVEYSKDQQNAYGR
CCCCCCEEEEEECCEEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHHHHCCCHHHHHHH
IENILERKNELYRPRVANLDQLVLVTSIKEPRVDLIVVDKIIVLAEKEKLDVVIVLNKTD
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECEEEEEEECCCEEEEEEEECCC
LLGSDEEKREMERFIEIYGKIYPVIPTSKITKNNLDILKSYLKNKVSTFAGPSGVGKSSL
CCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
LNVLDPKLKLREGEISKKLGRGKHTTTYAELLYFDFGGYIVDTPGFSSLELRGIKKDEVR
HHHHCCCCEECCCHHHHHHCCCCCHHHHHHHHEEECCCEEEECCCCCCEEECCCCHHHHH
RYFREFLEFDGFCQFSNCSHTVEPGCAIKEAVENGQISLSRYTNYCQIYEEIEDSSLKLQ
HHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
SWRKGIVVRFHSDMVTVQDLESNQKINCFLPGRFKLQKIRPIVGDYVEYSKDQQNAYGR
CCCCCEEEEEECCEEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHHHHCCCHHHHHHH
IENILERKNELYRPRVANLDQLVLVTSIKEPRVDLIVVDKIIVLAEKEKLDVVIVLNKTD
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECEEEEEEECCCEEEEEEEECCC
LLGSDEEKREMERFIEIYGKIYPVIPTSKITKNNLDILKSYLKNKVSTFAGPSGVGKSSL
CCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
LNVLDPKLKLREGEISKKLGRGKHTTTYAELLYFDFGGYIVDTPGFSSLELRGIKKDEVR
HHHHCCCCEECCCHHHHHHCCCCCHHHHHHHHEEECCCEEEECCCCCCEEECCCCHHHHH
RYFREFLEFDGFCQFSNCSHTVEPGCAIKEAVENGQISLSRYTNYCQIYEEIEDSSLKLQ
HHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]