| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is gltX
Identifier: 160903261
GI number: 160903261
Start: 2014668
End: 2016134
Strand: Direct
Name: gltX
Synonym: Pmob_1830
Alternate gene names: 160903261
Gene position: 2014668-2016134 (Clockwise)
Preceding gene: 160903260
Following gene: 160903262
Centisome position: 92.86
GC content: 33.54
Gene sequence:
>1467_bases ATGATCTCAAATACTGTAAGAACAAGGTTTGCACCAAGTCCAACAGGATATCTCCACGTTGGTGGAGCTAGAACGGCACT TTTTAATTATCTCTTTTCCAAAAAAAATGAAGGAAAATTTATCTTAAGAATCGAAGATACAGACATAGAACGTTCAACAA AAGAATCTGAAGATCAACTTATAAACACTCTAAAATGGTTGAATTTGAATTGGGATGAAGGACCTATAATTGGCGGAGAT TATGAACCTTATCGCCAAAGTGAAAGGTTAGAAATCTATCAGCGAAGAGCAAAGGAACTAATAGAAAAAGGTAAAGCATA CGAGGCATATATCTCACCAGAAGAAATAGAAGAAGTAAAAAACCAGTTAATAAGCGAAGGTAAACCGCCACATTATACCT ATGATTTGATTTCAAAGTACAACACAAAGGAAAGAATTGAAGAGTACAATTACAAAGGGTTAAAACCCGTTATTTTTTTG AAGATGCCTCAGAAAGATTATGAACTCGATGATAAAATAAAGGGTAAAGTTATCTTTAAGAAAGGTTCTATTGGTGATTT TATAATTTTAAGAAGTAATGGTATACCTACATATAATTTTGCTGTCGTTGTAGACGATATCGAAATGAAAATCACCCATG TTATCAGGGGGGACGATCATTTACCAAATACTTTGCGACAAATGGCGATTTATGAGGCTTTTGAGGTGGAACCCCCAATA TTTGCACATGTTTCAATGATCTTGGGACCAGATGGCAAAAAATTATCCAAAAGACATGGAGCTACCTCTGTCGAAGAGTT TATGGTTCAAGGATATTTGCCTGAAGCTGTTGACAATTATCTGGCACTGCTTGGTTGGTCTCATCCTGAGGGTAAGGAAA TATTGCCTCTCTCTGAAATAATTGATAATTTTACTTTGGATAGAGTCAATTCAAGCCCTGCAATATTCGATGAGAAAAAA TTAAAATGGATGAATGGGCAGTATCTAAGAAATAAGCCTTTGGAAGAAATCTATCAACTTGCAGAACCTTTTGTGACTGG ATCAAAACTTCTAAGCAAAGAACAATATGAAGTAAACAAAAAATGGGTTATTAAAGCTTTAGAAACTATTCTTTCTTCTG TTGAAATATTGAGCGAAATACCTGAAAAAATGGAAGTTTTTTTAAAAGATGTTTATCCAGATACAAACGATCCTGAATTT AAAGAATACTTTGATAAAAGAGGAGTAAAAGAAGCTATCAACTTGATTTATAAGTATTTCAATGAAGATGACAGATGGGA TACACAAACTATAACAGAGAATTTAAAGAATGCTATGAACGAAGCCAATCCTCAAAAGAAACCATTTTACATGTCTTTAA GAAAAATTTTAACGGATTCATTTCATGGACCCGATTTGATAAATACGATATTTTTATTAGGTAGGAATACTGTTTTGGAA AGACTTCAAAGGGTGATCGAGATTTGA
Upstream 100 bases:
>100_bases GTCCATCCTTAAAAGGGTGGGCAGCGGGGCGAAGGGGCGCTAAAACAAATTTTAGAGTTTCTAAAAACAATAAAATCAAA AAATTTTGGAGGACTAAACA
Downstream 100 bases:
>100_bases AAAGATTTCCTACAATTAAAATATACGATACTTTAAGTGGACAAGTAGTTGATTTAGTACCGGTGAAAGAAGGCGAAATA AAGATTTATCTTTGTGGACC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 2; GluRS 2
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MISNTVRTRFAPSPTGYLHVGGARTALFNYLFSKKNEGKFILRIEDTDIERSTKESEDQLINTLKWLNLNWDEGPIIGGD YEPYRQSERLEIYQRRAKELIEKGKAYEAYISPEEIEEVKNQLISEGKPPHYTYDLISKYNTKERIEEYNYKGLKPVIFL KMPQKDYELDDKIKGKVIFKKGSIGDFIILRSNGIPTYNFAVVVDDIEMKITHVIRGDDHLPNTLRQMAIYEAFEVEPPI FAHVSMILGPDGKKLSKRHGATSVEEFMVQGYLPEAVDNYLALLGWSHPEGKEILPLSEIIDNFTLDRVNSSPAIFDEKK LKWMNGQYLRNKPLEEIYQLAEPFVTGSKLLSKEQYEVNKKWVIKALETILSSVEILSEIPEKMEVFLKDVYPDTNDPEF KEYFDKRGVKEAINLIYKYFNEDDRWDTQTITENLKNAMNEANPQKKPFYMSLRKILTDSFHGPDLINTIFLLGRNTVLE RLQRVIEI
Sequences:
>Translated_488_residues MISNTVRTRFAPSPTGYLHVGGARTALFNYLFSKKNEGKFILRIEDTDIERSTKESEDQLINTLKWLNLNWDEGPIIGGD YEPYRQSERLEIYQRRAKELIEKGKAYEAYISPEEIEEVKNQLISEGKPPHYTYDLISKYNTKERIEEYNYKGLKPVIFL KMPQKDYELDDKIKGKVIFKKGSIGDFIILRSNGIPTYNFAVVVDDIEMKITHVIRGDDHLPNTLRQMAIYEAFEVEPPI FAHVSMILGPDGKKLSKRHGATSVEEFMVQGYLPEAVDNYLALLGWSHPEGKEILPLSEIIDNFTLDRVNSSPAIFDEKK LKWMNGQYLRNKPLEEIYQLAEPFVTGSKLLSKEQYEVNKKWVIKALETILSSVEILSEIPEKMEVFLKDVYPDTNDPEF KEYFDKRGVKEAINLIYKYFNEDDRWDTQTITENLKNAMNEANPQKKPFYMSLRKILTDSFHGPDLINTIFLLGRNTVLE RLQRVIEI >Mature_488_residues MISNTVRTRFAPSPTGYLHVGGARTALFNYLFSKKNEGKFILRIEDTDIERSTKESEDQLINTLKWLNLNWDEGPIIGGD YEPYRQSERLEIYQRRAKELIEKGKAYEAYISPEEIEEVKNQLISEGKPPHYTYDLISKYNTKERIEEYNYKGLKPVIFL KMPQKDYELDDKIKGKVIFKKGSIGDFIILRSNGIPTYNFAVVVDDIEMKITHVIRGDDHLPNTLRQMAIYEAFEVEPPI FAHVSMILGPDGKKLSKRHGATSVEEFMVQGYLPEAVDNYLALLGWSHPEGKEILPLSEIIDNFTLDRVNSSPAIFDEKK LKWMNGQYLRNKPLEEIYQLAEPFVTGSKLLSKEQYEVNKKWVIKALETILSSVEILSEIPEKMEVFLKDVYPDTNDPEF KEYFDKRGVKEAINLIYKYFNEDDRWDTQTITENLKNAMNEANPQKKPFYMSLRKILTDSFHGPDLINTIFLLGRNTVLE RLQRVIEI
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=327, Percent_Identity=37.9204892966361, Blast_Score=238, Evalue=9e-63, Organism=Escherichia coli, GI1788743, Length=484, Percent_Identity=34.9173553719008, Blast_Score=310, Evalue=1e-85, Organism=Escherichia coli, GI226510925, Length=257, Percent_Identity=30.7392996108949, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1786895, Length=128, Percent_Identity=34.375, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71993394, Length=342, Percent_Identity=38.3040935672515, Blast_Score=216, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6324540, Length=496, Percent_Identity=30.8467741935484, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6321192, Length=213, Percent_Identity=28.6384976525822, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=115, Percent_Identity=31.304347826087, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24665321, Length=499, Percent_Identity=31.6633266533066, Blast_Score=239, Evalue=3e-63,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE2_PETMO (A9BGT8)
Other databases:
- EMBL: CP000879 - RefSeq: YP_001568842.1 - ProteinModelPortal: A9BGT8 - SMR: A9BGT8 - GeneID: 5758046 - GenomeReviews: CP000879_GR - KEGG: pmo:Pmob_1830 - HOGENOM: HBG628189 - OMA: LEDTDQK - ProtClustDB: PRK01406 - BioCyc: PMOB403833:PMOB_1830-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 56769; Mature: 56769
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 257-257
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNTVRTRFAPSPTGYLHVGGARTALFNYLFSKKNEGKFILRIEDTDIERSTKESEDQL CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHH INTLKWLNLNWDEGPIIGGDYEPYRQSERLEIYQRRAKELIEKGKAYEAYISPEEIEEVK HHHHHHEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH NQLISEGKPPHYTYDLISKYNTKERIEEYNYKGLKPVIFLKMPQKDYELDDKIKGKVIFK HHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE KGSIGDFIILRSNGIPTYNFAVVVDDIEMKITHVIRGDDHLPNTLRQMAIYEAFEVEPPI ECCCCCEEEEECCCCCCEEEEEEEECCCEEEEHEECCCCCCHHHHHHHHHHHHHCCCCCH FAHVSMILGPDGKKLSKRHGATSVEEFMVQGYLPEAVDNYLALLGWSHPEGKEILPLSEI HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH IDNFTLDRVNSSPAIFDEKKLKWMNGQYLRNKPLEEIYQLAEPFVTGSKLLSKEQYEVNK HCCCCHHCCCCCCCCCCHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KWVIKALETILSSVEILSEIPEKMEVFLKDVYPDTNDPEFKEYFDKRGVKEAINLIYKYF HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH NEDDRWDTQTITENLKNAMNEANPQKKPFYMSLRKILTDSFHGPDLINTIFLLGRNTVLE CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH RLQRVIEI HHHHHHCC >Mature Secondary Structure MISNTVRTRFAPSPTGYLHVGGARTALFNYLFSKKNEGKFILRIEDTDIERSTKESEDQL CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHH INTLKWLNLNWDEGPIIGGDYEPYRQSERLEIYQRRAKELIEKGKAYEAYISPEEIEEVK HHHHHHEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHH NQLISEGKPPHYTYDLISKYNTKERIEEYNYKGLKPVIFLKMPQKDYELDDKIKGKVIFK HHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEE KGSIGDFIILRSNGIPTYNFAVVVDDIEMKITHVIRGDDHLPNTLRQMAIYEAFEVEPPI ECCCCCEEEEECCCCCCEEEEEEEECCCEEEEHEECCCCCCHHHHHHHHHHHHHCCCCCH FAHVSMILGPDGKKLSKRHGATSVEEFMVQGYLPEAVDNYLALLGWSHPEGKEILPLSEI HHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH IDNFTLDRVNSSPAIFDEKKLKWMNGQYLRNKPLEEIYQLAEPFVTGSKLLSKEQYEVNK HCCCCHHCCCCCCCCCCHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KWVIKALETILSSVEILSEIPEKMEVFLKDVYPDTNDPEFKEYFDKRGVKEAINLIYKYF HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH NEDDRWDTQTITENLKNAMNEANPQKKPFYMSLRKILTDSFHGPDLINTIFLLGRNTVLE CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHH RLQRVIEI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA