| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160903196
Identifier: 160903196
GI number: 160903196
Start: 1930372
End: 1930977
Strand: Direct
Name: 160903196
Synonym: Pmob_1764
Alternate gene names: NA
Gene position: 1930372-1930977 (Clockwise)
Preceding gene: 160903195
Following gene: 160903197
Centisome position: 88.98
GC content: 31.52
Gene sequence:
>606_bases ATGGCTAAAAGGCAAAAAACTTCAAAAAAAAATACAAAATATAAAATTGAAGTATTAATCGATTTGGCAAAGGGGGAACT ACTCAATCACGGCATCACTAACTTCAATTATGAAAAGGTTATCTACGATGCCAAACTCAGCAAATCGACTGTTTATAAAA AGTTTGGAAAAAAAGATGAATTCATAATTTTTGTTATTAAGAGTTTATTGGACGATTTCTTCACCCCTTTTAAGAAATAC GTTGATGATTTTAACACTTTCCAAGAAGTGCTTGAGTATCTCTCAAACTTAAACTTCGATGTTCAATCTCTGATGAAAGA GTACCCCATAGATGATCTTTTTGAACACCCTGAGATCACTTCCATTATAAATGATTACTACTATCAACGTTTTGGTAAGG TAATCATAGAAAAGATTGCTGAGTTTCAAAATGCTGGACAAATAAGAAAGGATATCGAAGCTAAATACATCTTAGAATTT CTTACTTCTGTTACCAAAGGAATGGGTATGATGCTCAAAGATCATGATTTCAAAGAAGTCATAGGTAATTATACAAAGTT AATCGAAACCGCCTTAGCTTATAAAATAAATTCTGAAAAGGAGTGA
Upstream 100 bases:
>100_bases ATAAGAGAAGAGTTAAAAGATGAAATATTAAAAGAAGCTATATTAATATGAAAAGAGATTACACTCTTATTTTACAAATT TTATAAGTTGGAGAAGATGT
Downstream 100 bases:
>100_bases ATAATATTAAATCCAAAAATCAGTTAAGATCCAGTAATTTTTTGACCGTCTTGAGTCTCACAATCTTTATTTTAGTTTTT TTTAATGTTAGTACAGTTGT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAKRQKTSKKNTKYKIEVLIDLAKGELLNHGITNFNYEKVIYDAKLSKSTVYKKFGKKDEFIIFVIKSLLDDFFTPFKKY VDDFNTFQEVLEYLSNLNFDVQSLMKEYPIDDLFEHPEITSIINDYYYQRFGKVIIEKIAEFQNAGQIRKDIEAKYILEF LTSVTKGMGMMLKDHDFKEVIGNYTKLIETALAYKINSEKE
Sequences:
>Translated_201_residues MAKRQKTSKKNTKYKIEVLIDLAKGELLNHGITNFNYEKVIYDAKLSKSTVYKKFGKKDEFIIFVIKSLLDDFFTPFKKY VDDFNTFQEVLEYLSNLNFDVQSLMKEYPIDDLFEHPEITSIINDYYYQRFGKVIIEKIAEFQNAGQIRKDIEAKYILEF LTSVTKGMGMMLKDHDFKEVIGNYTKLIETALAYKINSEKE >Mature_200_residues AKRQKTSKKNTKYKIEVLIDLAKGELLNHGITNFNYEKVIYDAKLSKSTVYKKFGKKDEFIIFVIKSLLDDFFTPFKKYV DDFNTFQEVLEYLSNLNFDVQSLMKEYPIDDLFEHPEITSIINDYYYQRFGKVIIEKIAEFQNAGQIRKDIEAKYILEFL TSVTKGMGMMLKDHDFKEVIGNYTKLIETALAYKINSEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23693; Mature: 23561
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRQKTSKKNTKYKIEVLIDLAKGELLNHGITNFNYEKVIYDAKLSKSTVYKKFGKKDE CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FIIFVIKSLLDDFFTPFKKYVDDFNTFQEVLEYLSNLNFDVQSLMKEYPIDDLFEHPEIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCHHH SIINDYYYQRFGKVIIEKIAEFQNAGQIRKDIEAKYILEFLTSVTKGMGMMLKDHDFKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHH IGNYTKLIETALAYKINSEKE HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AKRQKTSKKNTKYKIEVLIDLAKGELLNHGITNFNYEKVIYDAKLSKSTVYKKFGKKDE CCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FIIFVIKSLLDDFFTPFKKYVDDFNTFQEVLEYLSNLNFDVQSLMKEYPIDDLFEHPEIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCHHH SIINDYYYQRFGKVIIEKIAEFQNAGQIRKDIEAKYILEFLTSVTKGMGMMLKDHDFKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHH IGNYTKLIETALAYKINSEKE HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA