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The map label for this gene is yadT [C]

Identifier: 160903182

GI number: 160903182

Start: 1913208

End: 1914212

Strand: Direct

Name: yadT [C]

Synonym: Pmob_1747

Alternate gene names: 160903182

Gene position: 1913208-1914212 (Clockwise)

Preceding gene: 160903181

Following gene: 160903183

Centisome position: 88.18

GC content: 32.64

Gene sequence:

>1005_bases
ATGAAAAGAATCTCATCCTTTATTTTGATTTTATTTCTTTTAACTTTCACATCAGTTTTATTGTCTGAAACCATAACGGT
TATAGATATGGCTGGAAGGGAGGTAACTGTACCTTCTAAAATTGAACGTATCGTGACAACTTACAAGCCAGCAACTCAAT
TTGTATTTGCATTAAACGCTCAAAAAATGCTTGTTGGTGTAGATAATACATCAACAAGAGAAAAATTATTTACTTTAATC
TATCCAGAGGTCGAATCTTTAATAGAAGTAGGTTCAAAAAGAGAAGGAGTAAATATTGAAACTGTTGCTTCTTTAAATCC
AGATTTAGTAATATTATTTCCACATAACCAGGCTGAATTCACCGCTTCCAAATTAGAAACGCTGGGAATCTCCACCATTA
TTATCAATCCCGAAAGTTTAGAAGAAATAAGAGAAACAAATAGACTATTAGGAGAAGTATTAGGATTAGAAGATAGAGCA
AAAACAGTAGATGACCAGTTTGATAATATTTTAAAAATACTAGAAAAGGCTAAAAATTTGCCTGAGAATCAAAAAAAAGT
TGTCTATTTTGCTAATTCTCAACTATTAGATACTGTGGGAAAAAATATGATGCAAACTGATATGATAGAATGGGCTGGCG
GAATAAATCCCGCTGCAAAGAGCGATGTGGGGTTCATAAAGATATCTCCAGAGCAGTTAATAGCTTGGAATCCTGATTTT
ATAGTTACATCCCAAAAATTCCAAGGGGATATAGATCAATTGTATAAAGAAGTAAAATATCAAAACGTTAAGGCTTTTAA
AAACAAACAAATTTATCGTTTCCCTTCGGCCCTTGAACCATGGGATTACCCGAGTCCATCATCTTATTTGGGTATGTTAT
GGTTAGCAACAAAAATACATCCTGAACTTTTTTCGGATATTGATTTCGATAAAGTAGCTGACGAATTTTACGATACTTTA
TACGGAGTTCCATACAGTGAATTGTTATCTAAAACTGGAAATTAA

Upstream 100 bases:

>100_bases
TATCTCTTCACGAGGTTAACGATGAAGGCATTATCATCGATATCGATACAATTGAAGATTACAATATATATCTAAAAAAA
CAAAAAGGAGATGATAGTGA

Downstream 100 bases:

>100_bases
ATAACTAAACTTATTTATACGGAGATATTAATATGCCCATTCGCAATAAGAATCAGACTATAGGTCAACATCAAAAAAGA
ACACTCCTCTATCTTTTATT

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRISSFILILFLLTFTSVLLSETITVIDMAGREVTVPSKIERIVTTYKPATQFVFALNAQKMLVGVDNTSTREKLFTLI
YPEVESLIEVGSKREGVNIETVASLNPDLVILFPHNQAEFTASKLETLGISTIIINPESLEEIRETNRLLGEVLGLEDRA
KTVDDQFDNILKILEKAKNLPENQKKVVYFANSQLLDTVGKNMMQTDMIEWAGGINPAAKSDVGFIKISPEQLIAWNPDF
IVTSQKFQGDIDQLYKEVKYQNVKAFKNKQIYRFPSALEPWDYPSPSSYLGMLWLATKIHPELFSDIDFDKVADEFYDTL
YGVPYSELLSKTGN

Sequences:

>Translated_334_residues
MKRISSFILILFLLTFTSVLLSETITVIDMAGREVTVPSKIERIVTTYKPATQFVFALNAQKMLVGVDNTSTREKLFTLI
YPEVESLIEVGSKREGVNIETVASLNPDLVILFPHNQAEFTASKLETLGISTIIINPESLEEIRETNRLLGEVLGLEDRA
KTVDDQFDNILKILEKAKNLPENQKKVVYFANSQLLDTVGKNMMQTDMIEWAGGINPAAKSDVGFIKISPEQLIAWNPDF
IVTSQKFQGDIDQLYKEVKYQNVKAFKNKQIYRFPSALEPWDYPSPSSYLGMLWLATKIHPELFSDIDFDKVADEFYDTL
YGVPYSELLSKTGN
>Mature_334_residues
MKRISSFILILFLLTFTSVLLSETITVIDMAGREVTVPSKIERIVTTYKPATQFVFALNAQKMLVGVDNTSTREKLFTLI
YPEVESLIEVGSKREGVNIETVASLNPDLVILFPHNQAEFTASKLETLGISTIIINPESLEEIRETNRLLGEVLGLEDRA
KTVDDQFDNILKILEKAKNLPENQKKVVYFANSQLLDTVGKNMMQTDMIEWAGGINPAAKSDVGFIKISPEQLIAWNPDF
IVTSQKFQGDIDQLYKEVKYQNVKAFKNKQIYRFPSALEPWDYPSPSSYLGMLWLATKIHPELFSDIDFDKVADEFYDTL
YGVPYSELLSKTGN

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=222, Percent_Identity=29.2792792792793, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37798; Mature: 37798

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRISSFILILFLLTFTSVLLSETITVIDMAGREVTVPSKIERIVTTYKPATQFVFALNA
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECHHHHHHHHHHCCCHHHHHHEECC
QKMLVGVDNTSTREKLFTLIYPEVESLIEVGSKREGVNIETVASLNPDLVILFPHNQAEF
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCHHH
TASKLETLGISTIIINPESLEEIRETNRLLGEVLGLEDRAKTVDDQFDNILKILEKAKNL
HHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PENQKKVVYFANSQLLDTVGKNMMQTDMIEWAGGINPAAKSDVGFIKISPEQLIAWNPDF
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHEEEECCCE
IVTSQKFQGDIDQLYKEVKYQNVKAFKNKQIYRFPSALEPWDYPSPSSYLGMLWLATKIH
EEECHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHC
PELFSDIDFDKVADEFYDTLYGVPYSELLSKTGN
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure
MKRISSFILILFLLTFTSVLLSETITVIDMAGREVTVPSKIERIVTTYKPATQFVFALNA
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECHHHHHHHHHHCCCHHHHHHEECC
QKMLVGVDNTSTREKLFTLIYPEVESLIEVGSKREGVNIETVASLNPDLVILFPHNQAEF
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCHHH
TASKLETLGISTIIINPESLEEIRETNRLLGEVLGLEDRAKTVDDQFDNILKILEKAKNL
HHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PENQKKVVYFANSQLLDTVGKNMMQTDMIEWAGGINPAAKSDVGFIKISPEQLIAWNPDF
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHEEEECCCE
IVTSQKFQGDIDQLYKEVKYQNVKAFKNKQIYRFPSALEPWDYPSPSSYLGMLWLATKIH
EEECHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHC
PELFSDIDFDKVADEFYDTLYGVPYSELLSKTGN
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]