| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160903151
Identifier: 160903151
GI number: 160903151
Start: 1879792
End: 1881585
Strand: Direct
Name: 160903151
Synonym: Pmob_1716
Alternate gene names: NA
Gene position: 1879792-1881585 (Clockwise)
Preceding gene: 160903150
Following gene: 160903152
Centisome position: 86.64
GC content: 31.94
Gene sequence:
>1794_bases GTGAGGAAATTTTTTGGGATTTTTCTAATAGGTTTGGTATTTTTTCTATCGGGATGTACGGTTTTTCAACCTGCCTCTCA AGAAATTACTTTGCCAAGCGAAGACTTAGTGGCAATTCAAAATCAGTTGGATACTTTAAACGAGCGTTTAACTCAAATGG AAGAAAAATTTAATACTTTATCTGACGAAATTTATCAAATTTCAAAGAATAACAGTTATGCTTTTGATATGACAAAAAGC TTAAAAGATCAGTACACCAATATCGATAGCAGAGTGGTAACCTTGGAAAATTATCTATACGAAGGGCGAAGCTCTGAATC TATTGATAAACTTTTAGATTTGGATCAAAGAGTTCAAAGCTTAGAGAATCAAATTAACAATCTCTCTCTACAAAAGGTAA ATAATTTTACAAACACTGATTTGGATCAAAGAGTATCTCAATTGGAAATTCAGATTTCAGAATTACAAAATGTTGTGAAT AATATTCCTAAGAATGACCAAACAATCCTCTTAGATACGGTGAGTTCACTAACGGAAAAGGTTAATAATTTGGAGAAAAG TTTTCAAAACTCTGAATTTTACTTTTTGGAAAATGGAAATATAAAAGAACTTGTGCAACAAGAGGTAGATAAACTCAATT TAGAAAAATATGTTGAAAATATAGTTGATTATAAAACTGAAGAGACCGTTTCAAAATTTTATTATCAAAATCAGAGCGAA GATATACTGAATATTAAATCTTTAGAAAATACAGTTGCTTCTTTAGATAAGGAAGTTGAAAATTTAAAATATGACCTTCA GAAGGTTATTACTCAACCATCAAATTCATTAAACGAAAAATATCTGGGTCAAATACAAAATATTGAATTGAAGATAGATG AACTTTATAGATCTGTGGGGGATGCAGAAGTAAGTTATTTGTTTGAGAATTCAAACGAAGTAAGGTATCAAGTGAAATCA GGGGATACTCTAATTAGTATTTCAAACGCATTTAAATTAGGAAATAATGGTGTTCAAATTATCCTGCAAGCCAACAATTT ACAATCCACAAATATTAAAGTAGGACAAGAATTAATCATACCAGTGAACAATATTGAAGAGTATATTAGATGGCCATTTT CTAAAACATCACTCTCCGAGTATGAAAAAATTGTTGTACGTTTTGGAGAAAGGAATGCTGCAGGAATTTCTAGTGGGATA GGAGTTTTGGTTCAAACCGAACAAGTTTATCCAGTTCTACCTGGTAGGGTAATTGAGACCGGAAAGTTAGCAAATAACAA TTGGTATATAAAAATCGATCACGGAAATGCTATTATAAGCGTCATAGGGAATATAAAAACACCATATGTTGATGAAGGTA AATGGGTTGATTCTAATACTTCGTTAGGAATTGCTAACGCAGGGAGTATTGTAACAGTTGAATTGTGGAAGAATGGTGAA CCTAGAGACCCATTGAAACTTTTCTACGACATGATTGGAGAATTCCAGGCAACGTACTACACAGAATGGGATGACAAACT TGTCTATTCTCCAACTTTTAGGCTAACAAAGTCTGGAGAAAAACCAACATCGTATAAAACAATTGCAGCAGATCCTGATG TCTTGCCTTTAGGAACCATAGTTTATATACCTGAATTATCGGATCTTCCCAATAACGGTTATTTTGAGGTTCAAGATACG GGAGCTAAGGTATTGGGTAATAAAATTGATATATATGTAAACGATGTGAGATTAGCTAATAATAGTTTACAGAATCTAAC TATATATGTAGTTGGTAGAAAATCAAATGTATAA
Upstream 100 bases:
>100_bases GAAAAGAAGCGGCGAATTTGTTTGATTATTTGGTGAAAAATTATAATAATCCTACAAATCCGTATTTAAAAGCTGCGAAA TTTCTAAGGGGTGAATTAAA
Downstream 100 bases:
>100_bases GAATTATAAAGTTAGTAAATCTATTAGAAGCTTATCTAAAGGGTGTTAATTAATTGAGGAAACGTTTATCTTAAAAGGAG GAATTAAATATGTCTCTTAC
Product: peptidoglycan-binding LysM
Products: NA
Alternate protein names: 3D Domain-Containing Protein; Peptidase; 3D Domain Family
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MRKFFGIFLIGLVFFLSGCTVFQPASQEITLPSEDLVAIQNQLDTLNERLTQMEEKFNTLSDEIYQISKNNSYAFDMTKS LKDQYTNIDSRVVTLENYLYEGRSSESIDKLLDLDQRVQSLENQINNLSLQKVNNFTNTDLDQRVSQLEIQISELQNVVN NIPKNDQTILLDTVSSLTEKVNNLEKSFQNSEFYFLENGNIKELVQQEVDKLNLEKYVENIVDYKTEETVSKFYYQNQSE DILNIKSLENTVASLDKEVENLKYDLQKVITQPSNSLNEKYLGQIQNIELKIDELYRSVGDAEVSYLFENSNEVRYQVKS GDTLISISNAFKLGNNGVQIILQANNLQSTNIKVGQELIIPVNNIEEYIRWPFSKTSLSEYEKIVVRFGERNAAGISSGI GVLVQTEQVYPVLPGRVIETGKLANNNWYIKIDHGNAIISVIGNIKTPYVDEGKWVDSNTSLGIANAGSIVTVELWKNGE PRDPLKLFYDMIGEFQATYYTEWDDKLVYSPTFRLTKSGEKPTSYKTIAADPDVLPLGTIVYIPELSDLPNNGYFEVQDT GAKVLGNKIDIYVNDVRLANNSLQNLTIYVVGRKSNV
Sequences:
>Translated_597_residues MRKFFGIFLIGLVFFLSGCTVFQPASQEITLPSEDLVAIQNQLDTLNERLTQMEEKFNTLSDEIYQISKNNSYAFDMTKS LKDQYTNIDSRVVTLENYLYEGRSSESIDKLLDLDQRVQSLENQINNLSLQKVNNFTNTDLDQRVSQLEIQISELQNVVN NIPKNDQTILLDTVSSLTEKVNNLEKSFQNSEFYFLENGNIKELVQQEVDKLNLEKYVENIVDYKTEETVSKFYYQNQSE DILNIKSLENTVASLDKEVENLKYDLQKVITQPSNSLNEKYLGQIQNIELKIDELYRSVGDAEVSYLFENSNEVRYQVKS GDTLISISNAFKLGNNGVQIILQANNLQSTNIKVGQELIIPVNNIEEYIRWPFSKTSLSEYEKIVVRFGERNAAGISSGI GVLVQTEQVYPVLPGRVIETGKLANNNWYIKIDHGNAIISVIGNIKTPYVDEGKWVDSNTSLGIANAGSIVTVELWKNGE PRDPLKLFYDMIGEFQATYYTEWDDKLVYSPTFRLTKSGEKPTSYKTIAADPDVLPLGTIVYIPELSDLPNNGYFEVQDT GAKVLGNKIDIYVNDVRLANNSLQNLTIYVVGRKSNV >Mature_597_residues MRKFFGIFLIGLVFFLSGCTVFQPASQEITLPSEDLVAIQNQLDTLNERLTQMEEKFNTLSDEIYQISKNNSYAFDMTKS LKDQYTNIDSRVVTLENYLYEGRSSESIDKLLDLDQRVQSLENQINNLSLQKVNNFTNTDLDQRVSQLEIQISELQNVVN NIPKNDQTILLDTVSSLTEKVNNLEKSFQNSEFYFLENGNIKELVQQEVDKLNLEKYVENIVDYKTEETVSKFYYQNQSE DILNIKSLENTVASLDKEVENLKYDLQKVITQPSNSLNEKYLGQIQNIELKIDELYRSVGDAEVSYLFENSNEVRYQVKS GDTLISISNAFKLGNNGVQIILQANNLQSTNIKVGQELIIPVNNIEEYIRWPFSKTSLSEYEKIVVRFGERNAAGISSGI GVLVQTEQVYPVLPGRVIETGKLANNNWYIKIDHGNAIISVIGNIKTPYVDEGKWVDSNTSLGIANAGSIVTVELWKNGE PRDPLKLFYDMIGEFQATYYTEWDDKLVYSPTFRLTKSGEKPTSYKTIAADPDVLPLGTIVYIPELSDLPNNGYFEVQDT GAKVLGNKIDIYVNDVRLANNSLQNLTIYVVGRKSNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67839; Mature: 67839
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFFGIFLIGLVFFLSGCTVFQPASQEITLPSEDLVAIQNQLDTLNERLTQMEEKFNTL CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SDEIYQISKNNSYAFDMTKSLKDQYTNIDSRVVTLENYLYEGRSSESIDKLLDLDQRVQS HHHHHEECCCCCEEEEHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHH LENQINNLSLQKVNNFTNTDLDQRVSQLEIQISELQNVVNNIPKNDQTILLDTVSSLTEK HHHHHHCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH VNNLEKSFQNSEFYFLENGNIKELVQQEVDKLNLEKYVENIVDYKTEETVSKFYYQNQSE HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCC DILNIKSLENTVASLDKEVENLKYDLQKVITQPSNSLNEKYLGQIQNIELKIDELYRSVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCEEEHHHHHHHCC DAEVSYLFENSNEVRYQVKSGDTLISISNAFKLGNNGVQIILQANNLQSTNIKVGQELII CCEEEEEEECCCEEEEEEECCCEEEEECCCEEECCCCEEEEEEECCCCCCCEECCCEEEE PVNNIEEYIRWPFSKTSLSEYEKIVVRFGERNAAGISSGIGVLVQTEQVYPVLPGRVIET EHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEC GKLANNNWYIKIDHGNAIISVIGNIKTPYVDEGKWVDSNTSLGIANAGSIVTVELWKNGE CEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCEECCCCCEEEECCCCEEEEEEECCCC PRDPLKLFYDMIGEFQATYYTEWDDKLVYSPTFRLTKSGEKPTSYKTIAADPDVLPLGTI CCCHHHHHHHHHHCCCEEEEECCCCCEEECCCEEEECCCCCCCCEEEEECCCCCCCCCEE VYIPELSDLPNNGYFEVQDTGAKVLGNKIDIYVNDVRLANNSLQNLTIYVVGRKSNV EEECCCCCCCCCCEEEEECCCHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCC >Mature Secondary Structure MRKFFGIFLIGLVFFLSGCTVFQPASQEITLPSEDLVAIQNQLDTLNERLTQMEEKFNTL CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SDEIYQISKNNSYAFDMTKSLKDQYTNIDSRVVTLENYLYEGRSSESIDKLLDLDQRVQS HHHHHEECCCCCEEEEHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHH LENQINNLSLQKVNNFTNTDLDQRVSQLEIQISELQNVVNNIPKNDQTILLDTVSSLTEK HHHHHHCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH VNNLEKSFQNSEFYFLENGNIKELVQQEVDKLNLEKYVENIVDYKTEETVSKFYYQNQSE HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCC DILNIKSLENTVASLDKEVENLKYDLQKVITQPSNSLNEKYLGQIQNIELKIDELYRSVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHCCEEEHHHHHHHCC DAEVSYLFENSNEVRYQVKSGDTLISISNAFKLGNNGVQIILQANNLQSTNIKVGQELII CCEEEEEEECCCEEEEEEECCCEEEEECCCEEECCCCEEEEEEECCCCCCCEECCCEEEE PVNNIEEYIRWPFSKTSLSEYEKIVVRFGERNAAGISSGIGVLVQTEQVYPVLPGRVIET EHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEC GKLANNNWYIKIDHGNAIISVIGNIKTPYVDEGKWVDSNTSLGIANAGSIVTVELWKNGE CEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCEECCCCCEEEECCCCEEEEEEECCCC PRDPLKLFYDMIGEFQATYYTEWDDKLVYSPTFRLTKSGEKPTSYKTIAADPDVLPLGTI CCCHHHHHHHHHHCCCEEEEECCCCCEEECCCEEEECCCCCCCCEEEEECCCCCCCCCEE VYIPELSDLPNNGYFEVQDTGAKVLGNKIDIYVNDVRLANNSLQNLTIYVVGRKSNV EEECCCCCCCCCCEEEEECCCHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA