| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is cca [H]
Identifier: 160903130
GI number: 160903130
Start: 1852345
End: 1855002
Strand: Direct
Name: cca [H]
Synonym: Pmob_1695
Alternate gene names: 160903130
Gene position: 1852345-1855002 (Clockwise)
Preceding gene: 160903129
Following gene: 160903131
Centisome position: 85.38
GC content: 31.57
Gene sequence:
>2658_bases TTGGTTCCTAAAATTATTATAACTACGCATAAAAATGCCGATTTTGATGGGTTTGCCGGATGTGTGGCTGCATCATTAAT ATATGAAGACTCTATTATTGTGCTCGAAGGAGAGCCTCAGCAAAATCTTAAGGAATTTTTGAATATATACGATATTCCAT ACGAAAAAGAGAATAATTTTATAAAAGAGTATCAAGAAGAAATAAAAAACCGCAATTTCGAAAAAGTTGTGATTGTGGAT ACTGCTGATATCAATAGAATCCCTGATTTTATAAAATCGCTCGTTGAACAGGGAACAGAAGTTGATATATATGATCATCA TCCGGAGTTAAAGGAGCAAAATATCACTGGTAATAATTATTCTAAAGAAGTAGGAAGCGCCACAACGTTAATTGTTCAAA AATTATTAGAAACCAAAATAGTTCTTCCTGATACCTATGAAACTCTTTTTTTAATAGCAATCCATGAAGATACTGGAAAC TATGTTTATTCTACAACGACGCCTCTAGATCATCAAATTTCTGCAGAGCTATTAAAAGGCGGTGCTAGGATAGAAGAGGT AGAAGAGTTTGTTTCGTTAGAAATGACAAAAGAGCAAAAAGAACTTTTTGACAAACTCTATAACAATGTACAAGAGCTTA CCTTGGAGGAAGTAACAATACAGATTACTTATTCTGAGATCGACAAATTTATAGGTGGGTTAAACGTTATAACCCACAAA TTGTTTGAGACTCTAACTCCAGATGTTTTGTTTGTTGTTGTAAAAATGGGTAAAAGCATTCATATAGTTGCAAGATCAAG GATTGAAGAAATAGATTTAAATAAAATTCTATCTTTATTTGGCGGTGGAGGTCATAAAAAAGCTGGTTCAGCCAAAACAA AAGCTCTTGGGATACAAGAGGTCATTAACAAGATTAAAAAAGAGTTAAAATCTTCTTTTGTCCCAGTTTTAAAAGCAAAG CATATTATGTCATCTCCCGTCAGAACCATATTATCATTTGAAACAGTGGAAATAGCTCATGAATTGATGTTTCAAACAGG GCATTCAGGCCTTCCTGTAATATCTGACAATAAATTAGTGGGTATTGTAACTAAAAAAGACATAGAAAAAGCAATGAAAC ATGGTTTAAAAAATGCCCCTGTTAAAGCTATAATGAGCACTAACTTAAAGGTTGTTGATGTAGAAACTTCGTTGACTCAA GTAAGAAGGATCATGGCAGAAGCAGACATTGGAAGGATTCCCGTTTTAAAAGATGGAATACTTGTTGGCATAATAACTAG AACTGATCTTTTAAGGGCTACTAACGGAGTTTTTAATTTTTCACTTAGCCCAATATTAGAAGAAAAGTATAAATCGCAAA ATCTAAAAGAAGAAATGGAAAAAATTCTACCGATATCTATTCTTAATCTTCTAAAACTTATTGGCCTGTATGGGAATGAG TTGGGGTTAAACGTATATGTAGTAGGAGGATTTGTCAGGGATCTTTTGCTAGCAATTAACTCTAAATCAAACGGTACAAA GTCAATACCCTACGATATAGATGTAGTAGTGGAAGGGGATGGTTTGTTATTTGGTAAATATGTTGCTAAACAATTAAGGG CAAAATATGTTGAACACCCCAAATTTCACACCTGCTCAATTTTTTATAGAAATGGGGAAAATAAGATAATAAGGATTGAT ATTGCAACTGCCCGAACAGAATATTACGAAGAAGCAGGAGAACTTCCCAAGGTTGAATTATCAACTATTAAAAAAGATTT ATATAGAAGGGATTTCTCTATAAACGCCATGGCAATAAAAATTAATTCGGGTTCCTTTGGAATACTGATGGATTTTTTTA ATTGTAAAAAAGATCTTGAAGAAGGCAAGATAAGAATACTTTACCCACTTTCTTTTATCGAAGATCCTACTAGAATATTG AGAGCTATAAGGTTTGAACAAAGATTTGGTTTTGAAATTGAGCCTAACACCTTAACAAAATTAGAAGAAGCTGTAGAAAA TGGATATTTAGAAAAAGTCACTGGAATGAGGATAAGAGAGGAATTAGAAAAAATACTAGAAGAGCCCCAACCTATGAAAG CAATAAAAAGAATGGGTAAACTGAAAATTATTCTTCACTTGTTCGAAAAAACTTACTACTCTCCTACACTAGAAAAAGAT TTAGAAAAACTTTTTGATGTTAGGGAATACTTTAAGGCAAACTTACCAAATTATTTGAATAAAGTCAGACTATTCCACAT AGTATTATGCGTTCTACTGCAATACACTCCAGAAGAATCTCTAAAGAAAATTACTGAAAGATATGGACTACCGAAAGATT TTATTAAGAATTTAATCCAAGTAAAAAATGTATTTAATGAAATTTCTATAGATTTAAATGACAAAGAAAAAACATCAAAA TTGTCTTATTTCTATGAAAAAACCAACGGTTTTCAAAATGAACAATTAATTTTTTTAGCTGTAAAACTTCCAGAAGAATT ATTAGCAAAATACTATGAATATTTAAGAAAAATTGAGAAACTAAAACTCTCCATTACGGGGAAAGATTTATTAAAGAAAG GCTATGAAGGTGTTCAAATTAAAACAAAATTGGAAGAAATAAAGAAAAAACTCTTGAATGGCGAAATACAACCTGGCGAA GAAAAAAATTTGATATAA
Upstream 100 bases:
>100_bases AGTTTATAGAAAGGGAATTTATCAATAAATTAGATTGAAGTAAAATAGAGACATTCAACACATTTTTAAATAATGTATTT AATCCGAGGGAGAATTTATC
Downstream 100 bases:
>100_bases ATTTGACAACTCAGTTTTTTTATGTTATAATCCCTAAAATTTAACGGAAGGAGATTTTTAAATTTATGACTAATTGTGAA AAAAATTTCACTTCATATAA
Product: CBS domain-containing protein
Products: NA
Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MVPKIIITTHKNADFDGFAGCVAASLIYEDSIIVLEGEPQQNLKEFLNIYDIPYEKENNFIKEYQEEIKNRNFEKVVIVD TADINRIPDFIKSLVEQGTEVDIYDHHPELKEQNITGNNYSKEVGSATTLIVQKLLETKIVLPDTYETLFLIAIHEDTGN YVYSTTTPLDHQISAELLKGGARIEEVEEFVSLEMTKEQKELFDKLYNNVQELTLEEVTIQITYSEIDKFIGGLNVITHK LFETLTPDVLFVVVKMGKSIHIVARSRIEEIDLNKILSLFGGGGHKKAGSAKTKALGIQEVINKIKKELKSSFVPVLKAK HIMSSPVRTILSFETVEIAHELMFQTGHSGLPVISDNKLVGIVTKKDIEKAMKHGLKNAPVKAIMSTNLKVVDVETSLTQ VRRIMAEADIGRIPVLKDGILVGIITRTDLLRATNGVFNFSLSPILEEKYKSQNLKEEMEKILPISILNLLKLIGLYGNE LGLNVYVVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGDGLLFGKYVAKQLRAKYVEHPKFHTCSIFYRNGENKIIRID IATARTEYYEEAGELPKVELSTIKKDLYRRDFSINAMAIKINSGSFGILMDFFNCKKDLEEGKIRILYPLSFIEDPTRIL RAIRFEQRFGFEIEPNTLTKLEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRMGKLKIILHLFEKTYYSPTLEKD LEKLFDVREYFKANLPNYLNKVRLFHIVLCVLLQYTPEESLKKITERYGLPKDFIKNLIQVKNVFNEISIDLNDKEKTSK LSYFYEKTNGFQNEQLIFLAVKLPEELLAKYYEYLRKIEKLKLSITGKDLLKKGYEGVQIKTKLEEIKKKLLNGEIQPGE EKNLI
Sequences:
>Translated_885_residues MVPKIIITTHKNADFDGFAGCVAASLIYEDSIIVLEGEPQQNLKEFLNIYDIPYEKENNFIKEYQEEIKNRNFEKVVIVD TADINRIPDFIKSLVEQGTEVDIYDHHPELKEQNITGNNYSKEVGSATTLIVQKLLETKIVLPDTYETLFLIAIHEDTGN YVYSTTTPLDHQISAELLKGGARIEEVEEFVSLEMTKEQKELFDKLYNNVQELTLEEVTIQITYSEIDKFIGGLNVITHK LFETLTPDVLFVVVKMGKSIHIVARSRIEEIDLNKILSLFGGGGHKKAGSAKTKALGIQEVINKIKKELKSSFVPVLKAK HIMSSPVRTILSFETVEIAHELMFQTGHSGLPVISDNKLVGIVTKKDIEKAMKHGLKNAPVKAIMSTNLKVVDVETSLTQ VRRIMAEADIGRIPVLKDGILVGIITRTDLLRATNGVFNFSLSPILEEKYKSQNLKEEMEKILPISILNLLKLIGLYGNE LGLNVYVVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGDGLLFGKYVAKQLRAKYVEHPKFHTCSIFYRNGENKIIRID IATARTEYYEEAGELPKVELSTIKKDLYRRDFSINAMAIKINSGSFGILMDFFNCKKDLEEGKIRILYPLSFIEDPTRIL RAIRFEQRFGFEIEPNTLTKLEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRMGKLKIILHLFEKTYYSPTLEKD LEKLFDVREYFKANLPNYLNKVRLFHIVLCVLLQYTPEESLKKITERYGLPKDFIKNLIQVKNVFNEISIDLNDKEKTSK LSYFYEKTNGFQNEQLIFLAVKLPEELLAKYYEYLRKIEKLKLSITGKDLLKKGYEGVQIKTKLEEIKKKLLNGEIQPGE EKNLI >Mature_885_residues MVPKIIITTHKNADFDGFAGCVAASLIYEDSIIVLEGEPQQNLKEFLNIYDIPYEKENNFIKEYQEEIKNRNFEKVVIVD TADINRIPDFIKSLVEQGTEVDIYDHHPELKEQNITGNNYSKEVGSATTLIVQKLLETKIVLPDTYETLFLIAIHEDTGN YVYSTTTPLDHQISAELLKGGARIEEVEEFVSLEMTKEQKELFDKLYNNVQELTLEEVTIQITYSEIDKFIGGLNVITHK LFETLTPDVLFVVVKMGKSIHIVARSRIEEIDLNKILSLFGGGGHKKAGSAKTKALGIQEVINKIKKELKSSFVPVLKAK HIMSSPVRTILSFETVEIAHELMFQTGHSGLPVISDNKLVGIVTKKDIEKAMKHGLKNAPVKAIMSTNLKVVDVETSLTQ VRRIMAEADIGRIPVLKDGILVGIITRTDLLRATNGVFNFSLSPILEEKYKSQNLKEEMEKILPISILNLLKLIGLYGNE LGLNVYVVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGDGLLFGKYVAKQLRAKYVEHPKFHTCSIFYRNGENKIIRID IATARTEYYEEAGELPKVELSTIKKDLYRRDFSINAMAIKINSGSFGILMDFFNCKKDLEEGKIRILYPLSFIEDPTRIL RAIRFEQRFGFEIEPNTLTKLEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRMGKLKIILHLFEKTYYSPTLEKD LEKLFDVREYFKANLPNYLNKVRLFHIVLCVLLQYTPEESLKKITERYGLPKDFIKNLIQVKNVFNEISIDLNDKEKTSK LSYFYEKTNGFQNEQLIFLAVKLPEELLAKYYEYLRKIEKLKLSITGKDLLKKGYEGVQIKTKLEEIKKKLLNGEIQPGE EKNLI
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG0617
COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 3 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789436, Length=259, Percent_Identity=28.1853281853282, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI87081691, Length=305, Percent_Identity=25.5737704918033, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6321016, Length=234, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023068 - InterPro: IPR002646 [H]
Pfam domain/function: PF01743 PolyA_pol [H]
EC number: =2.7.7.21; =2.7.7.25 [H]
Molecular weight: Translated: 101181; Mature: 101181
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPKIIITTHKNADFDGFAGCVAASLIYEDSIIVLEGEPQQNLKEFLNIYDIPYEKENNF CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCH IKEYQEEIKNRNFEKVVIVDTADINRIPDFIKSLVEQGTEVDIYDHHPELKEQNITGNNY HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC SKEVGSATTLIVQKLLETKIVLPDTYETLFLIAIHEDTGNYVYSTTTPLDHQISAELLKG HHHHHHHHHHHHHHHHHCEECCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHC GARIEEVEEFVSLEMTKEQKELFDKLYNNVQELTLEEVTIQITYSEIDKFIGGLNVITHK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHH LFETLTPDVLFVVVKMGKSIHIVARSRIEEIDLNKILSLFGGGGHKKAGSAKTKALGIQE HHHHHCHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VINKIKKELKSSFVPVLKAKHIMSSPVRTILSFETVEIAHELMFQTGHSGLPVISDNKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEE GIVTKKDIEKAMKHGLKNAPVKAIMSTNLKVVDVETSLTQVRRIMAEADIGRIPVLKDGI EEEEHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCEECCCE LVGIITRTDLLRATNGVFNFSLSPILEEKYKSQNLKEEMEKILPISILNLLKLIGLYGNE EEEEEHHHHHHHHCCCEEECCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCC LGLNVYVVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGDGLLFGKYVAKQLRAKYVEHP CCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHCCC KFHTCSIFYRNGENKIIRIDIATARTEYYEEAGELPKVELSTIKKDLYRRDFSINAMAIK CCEEEEEEEECCCCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEE INSGSFGILMDFFNCKKDLEEGKIRILYPLSFIEDPTRILRAIRFEQRFGFEIEPNTLTK ECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHHHHHHCCCEECCHHHHH LEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRMGKLKIILHLFEKTYYSPTLEKD HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LEKLFDVREYFKANLPNYLNKVRLFHIVLCVLLQYTPEESLKKITERYGLPKDFIKNLIQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHH VKNVFNEISIDLNDKEKTSKLSYFYEKTNGFQNEQLIFLAVKLPEELLAKYYEYLRKIEK HHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH LKLSITGKDLLKKGYEGVQIKTKLEEIKKKLLNGEIQPGEEKNLI HEEEECCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVPKIIITTHKNADFDGFAGCVAASLIYEDSIIVLEGEPQQNLKEFLNIYDIPYEKENNF CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCH IKEYQEEIKNRNFEKVVIVDTADINRIPDFIKSLVEQGTEVDIYDHHPELKEQNITGNNY HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC SKEVGSATTLIVQKLLETKIVLPDTYETLFLIAIHEDTGNYVYSTTTPLDHQISAELLKG HHHHHHHHHHHHHHHHHCEECCCCCCCEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHC GARIEEVEEFVSLEMTKEQKELFDKLYNNVQELTLEEVTIQITYSEIDKFIGGLNVITHK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHH LFETLTPDVLFVVVKMGKSIHIVARSRIEEIDLNKILSLFGGGGHKKAGSAKTKALGIQE HHHHHCHHHHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VINKIKKELKSSFVPVLKAKHIMSSPVRTILSFETVEIAHELMFQTGHSGLPVISDNKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEE GIVTKKDIEKAMKHGLKNAPVKAIMSTNLKVVDVETSLTQVRRIMAEADIGRIPVLKDGI EEEEHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCEECCCE LVGIITRTDLLRATNGVFNFSLSPILEEKYKSQNLKEEMEKILPISILNLLKLIGLYGNE EEEEEHHHHHHHHCCCEEECCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCC LGLNVYVVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGDGLLFGKYVAKQLRAKYVEHP CCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHCCC KFHTCSIFYRNGENKIIRIDIATARTEYYEEAGELPKVELSTIKKDLYRRDFSINAMAIK CCEEEEEEEECCCCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEE INSGSFGILMDFFNCKKDLEEGKIRILYPLSFIEDPTRILRAIRFEQRFGFEIEPNTLTK ECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHHHHHHCCCEECCHHHHH LEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRMGKLKIILHLFEKTYYSPTLEKD HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LEKLFDVREYFKANLPNYLNKVRLFHIVLCVLLQYTPEESLKKITERYGLPKDFIKNLIQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHH VKNVFNEISIDLNDKEKTSKLSYFYEKTNGFQNEQLIFLAVKLPEELLAKYYEYLRKIEK HHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH LKLSITGKDLLKKGYEGVQIKTKLEEIKKKLLNGEIQPGEEKNLI HEEEECCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA