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The map label for this gene is flgC [H]

Identifier: 160903121

GI number: 160903121

Start: 1843605

End: 1844027

Strand: Direct

Name: flgC [H]

Synonym: Pmob_1685

Alternate gene names: 160903121

Gene position: 1843605-1844027 (Clockwise)

Preceding gene: 160903120

Following gene: 160903122

Centisome position: 84.98

GC content: 40.19

Gene sequence:

>423_bases
ATGATGGATGGGTTATTTAAGGTTTTGGATATTGCTGCAAGCGGTATGACAGCAGAAAGATTTAGGTTAGACGTTATTTC
TCAGAATTTGGCTAATTCAGATACAACTAGGACAGAAGAAGGTGGACCTTACAGAAGAAAAGCAGTAATCTTTCAAGAAG
CACTCAGTGAAAGTACAAATGGAGATAGGAATTTTGGCGGAGTGAAGGTCTCTTCTATAGTAGAGGATCCCTCACCTTTT
AGATTAGTATATGACCCTAACCACCCCGATGCAGACGCTGAAGGATACGTTAGTTATCCTAATGTCAATGTATTACGAGA
AATGGTCGATATGATGTCTGCCCAAAGAGCTTATGAGATGAATGCAGCGGTTGTAAATTCAGCCAAAAGCATGTACAATT
CTGCCCTTGGAATAGGCAGATAA

Upstream 100 bases:

>100_bases
AATTGGTAAGAATGACTCAAAATACCTTAAAATACAACACTTTATCCAGATTGACGACCTATGCAATCCAAAGATATGAA
ACAGCTATTAGAGGTGGTAA

Downstream 100 bases:

>100_bases
GTAAGGAGGTGAGCATTGATGACAGAAGGTATAAATGGAATAAATGGGATTGACCCCAATAAATTAGCTCCAGAAAAAAC
TAAACAAGAAGATAAAAATT

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTNGDRNFGGVKVSSIVEDPSPF
RLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEMNAAVVNSAKSMYNSALGIGR

Sequences:

>Translated_140_residues
MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTNGDRNFGGVKVSSIVEDPSPF
RLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEMNAAVVNSAKSMYNSALGIGR
>Mature_140_residues
MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTNGDRNFGGVKVSSIVEDPSPF
RLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEMNAAVVNSAKSMYNSALGIGR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=138, Percent_Identity=45.6521739130435, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15378; Mature: 15378

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTN
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GDRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEM
CCCCCCCEEEEHHHCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
NAAVVNSAKSMYNSALGIGR
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMDGLFKVLDIAASGMTAERFRLDVISQNLANSDTTRTEEGGPYRRKAVIFQEALSESTN
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GDRNFGGVKVSSIVEDPSPFRLVYDPNHPDADAEGYVSYPNVNVLREMVDMMSAQRAYEM
CCCCCCCEEEEHHHCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
NAAVVNSAKSMYNSALGIGR
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]