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The map label for this gene is ydiB [H]

Identifier: 160902967

GI number: 160902967

Start: 1648242

End: 1648721

Strand: Direct

Name: ydiB [H]

Synonym: Pmob_1524

Alternate gene names: 160902967

Gene position: 1648242-1648721 (Clockwise)

Preceding gene: 160902966

Following gene: 160902968

Centisome position: 75.97

GC content: 34.79

Gene sequence:

>480_bases
TTGGGGAGTGAACAACCTATAATATCTTACAACAAATTCAACCTAAAACAAATCCAAAAACTTGGAGCAACTATTTCTAA
ATATCTTTTCCCGGGAGCTAAGTTATTACTTTTTGGCAATTTAGGAACGGGGAAAACCACGTTGACATCTTATATAGTTA
ACAGTTTGAGCAAAACTCCCGTAAACGTAACAAGCCCAACTTTTTCCCTAATAAAGGTATACAACACAAATCCAACAATA
TATCATGTCGACTTGTATAGGTTAAACGATCCTCAAGAGATAGAGTACTTGGATGTTTTTTTGGATCCTGAAGGGGTATA
TATAATTGAATGGGCAGACTTTTTGGATTATTTAACCCCCGAAGAAAGATTGGAGATTCATATTTCGTACAATGAAGATA
TTAAGTATAGGGATGTAAAAATCGAAGGATTTGGTGAAAAGTACAAAGAGATGGAGGCTATTATAGAAAAGGAGCAGTAG

Upstream 100 bases:

>100_bases
AGCTTTACAACGAATACCATGCGTTAATAGTTAAGCACTCAAAGGTTTACTGTAAAAAAACGCCTAAATGTTCTGATTGT
TTTCTAAAAGAAAAATGTAA

Downstream 100 bases:

>100_bases
TTTTGTGTCAATTCAGAGAATTTTTAACGTTATCTCAGAAAAAGATTACAAAGAACATAGCCAAAAAGCAAGAAAAATAG
TTGAAAAGGCTAATAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGSEQPIISYNKFNLKQIQKLGATISKYLFPGAKLLLFGNLGTGKTTLTSYIVNSLSKTPVNVTSPTFSLIKVYNTNPTI
YHVDLYRLNDPQEIEYLDVFLDPEGVYIIEWADFLDYLTPEERLEIHISYNEDIKYRDVKIEGFGEKYKEMEAIIEKEQ

Sequences:

>Translated_159_residues
MGSEQPIISYNKFNLKQIQKLGATISKYLFPGAKLLLFGNLGTGKTTLTSYIVNSLSKTPVNVTSPTFSLIKVYNTNPTI
YHVDLYRLNDPQEIEYLDVFLDPEGVYIIEWADFLDYLTPEERLEIHISYNEDIKYRDVKIEGFGEKYKEMEAIIEKEQ
>Mature_158_residues
GSEQPIISYNKFNLKQIQKLGATISKYLFPGAKLLLFGNLGTGKTTLTSYIVNSLSKTPVNVTSPTFSLIKVYNTNPTIY
HVDLYRLNDPQEIEYLDVFLDPEGVYIIEWADFLDYLTPEERLEIHISYNEDIKYRDVKIEGFGEKYKEMEAIIEKEQ

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=114, Percent_Identity=34.2105263157895, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 18387; Mature: 18256

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSEQPIISYNKFNLKQIQKLGATISKYLFPGAKLLLFGNLGTGKTTLTSYIVNSLSKTP
CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
VNVTSPTFSLIKVYNTNPTIYHVDLYRLNDPQEIEYLDVFLDPEGVYIIEWADFLDYLTP
CEECCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEHHHHHHHCCC
EERLEIHISYNEDIKYRDVKIEGFGEKYKEMEAIIEKEQ
CCCEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GSEQPIISYNKFNLKQIQKLGATISKYLFPGAKLLLFGNLGTGKTTLTSYIVNSLSKTP
CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
VNVTSPTFSLIKVYNTNPTIYHVDLYRLNDPQEIEYLDVFLDPEGVYIIEWADFLDYLTP
CEECCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEHHHHHHHCCC
EERLEIHISYNEDIKYRDVKIEGFGEKYKEMEAIIEKEQ
CCCEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]