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The map label for this gene is 160902895

Identifier: 160902895

GI number: 160902895

Start: 1562661

End: 1563386

Strand: Direct

Name: 160902895

Synonym: Pmob_1450

Alternate gene names: NA

Gene position: 1562661-1563386 (Clockwise)

Preceding gene: 160902887

Following gene: 160902904

Centisome position: 72.03

GC content: 32.92

Gene sequence:

>1415_bases
ATGGACGAAGAAAAGACAATGCTAGTTAGTAAAGCTCTAGAAGAGATCAGAATAGCAATATTGGAAGAAGATAAATTAAG
TGAAATTTTTTTCGAGGATTTTGAAACCGATAGAAATATTGGGAAAATCTTTCTGGGTATAATTGAAAATAGGGTTCCGA
GTTTGGAGGCTTTTTTTGTTAATATTGGATTAGGAAAGAACGGTTTTCTCAGATACAGAGACGTTCTTGATGATCCCAAT
CAATATAAAGTTGGAGATAAGATTCTAGTTCAGGTAAGGAAAGACGGTGGAACGAGAAAAGGCCCTCAACTTTCTATGCA
AATAAGTTTGCCTGGGAAATATTTAGTATACATTCCAAATTCTAATGAAAGTATTGGGATATCTAGAAAAATTCTCCAAG
AAAAAGAAAGAATAAGATTGAGGCAAGTTGCAAAAAAAATTCTAATTGATAACGAATCTATAATATTTAGAACTAATTCT
GAAGGAATCGATGAAAAAGAAGTAGAAGTAGAATTAAGCGAAATGCGCAAAATGTATAACAGTATTTTACAAAGATTTCA
TTCTCAAAAAAATCCTGGAGTTTTATACGAAGAAAGTGATTTTCTTGAGTATATATTAAGGGAAAGATTGGATTCTAAAA
CAAAAAAAATAATCACAGATGACAGACAAATTTTTAGAAAACTAAAAAAAGTTTGAAAGGTTTCGAACTAAAACCCAAAG
TTGAGTTTGTAAGAGGAGATGTTTTTCAGATCCACAATATATACCATCAAATGGAAGAGATCTTTACAAAGAAGATAGAA
TTATCTGGTGGAGGAACAATTACGGTAGATAGAACGGAAGCTTTAACAGCCATCGATGTAGATTCTGCTGGAAATTTAGA
GGGGAAGAATATTGAAGAAACTTCTTTTATTACAAATATGGAAGCAGCCAAAGAAATAGCTAGGCAATTGAAATTAAGGA
ATATTGGCGGTATGATCGTAGTTGATTTTATTGATATGAAGGACTCTTCACACAAAAAAACGATTATCAATATTCTAAAA
GAAGAATCAAAAAAAGATAAATCAAAGGTTACCATATTGGGATTCACAAACATGGGGTTGTTAGAAATTATTAGGAAAAG
AACCACACAACCTCTGGATACCAATGTGTATTCACAATGCCCATTGTGTCATGGAACGGGAAAAATCATAGCCCCTTCTC
TTGTGCATGGAAGATTGATAAAAGAATTATTGTCCTCCGCAAAGGAAATAAAAAAAGAAAAAATAAAAGTAATTGAAATC
AACGCATTTCACAACCTTTCGGGATATTTAACCCCAGCTTTGACTGAAGAACTGGAAAAACAGTTAAACGTAAAATTAGA
AGTTTCTTTTAACTGGCTAAATCCCAATTCTTACAATATTAAATACAAAAAATAA

Upstream 100 bases:

>100_bases
ATTACAATAGACTTGATTTTAGAAGGAAGAATAAACGAAGCGATGAATAAATTTAACAAAAAGATAATTTAGAACAAAGT
TGGAGGAAGGAAATTAAGTA

Downstream 100 bases:

>100_bases
CTTATTAGCATGAAAGCGGTGAAATATCATTTTAAAGAAAATATTGTTTTTTGCGATAATTACTCTTTCTATCTTTTTTT
TCGTTTCTGGAATATATCTC

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>471_residues
MDEEKTMLVSKALEEIRIAILEEDKLSEIFFEDFETDRNIGKIFLGIIENRVPSLEAFFVNIGLGKNGFLRYRDVLDDPN
QYKVGDKILVQVRKDGGTRKGPQLSMQISLPGKYLVYIPNSNESIGISRKILQEKERIRLRQVAKKILIDNESIIFRTNS
EGIDEKEVEVELSEMRKMYNSILQRFHSQKNPGVLYEESDFLEYILRERLDSKTKKIITDDRQIFRKLKKSLKGFELKPK
VEFVRGDVFQIHNIYHQMEEIFTKKIELSGGGTITVDRTEALTAIDVDSAGNLEGKNIEETSFITNMEAAKEIARQLKLR
NIGGMIVVDFIDMKDSSHKKTIINILKEESKKDKSKVTILGFTNMGLLEIIRKRTTQPLDTNVYSQCPLCHGTGKIIAPS
LVHGRLIKELLSSAKEIKKEKIKVIEINAFHNLSGYLTPALTEELEKQLNVKLEVSFNWLNPNSYNIKYKK

Sequences:

>Translated_242_residues
LFFVFNIVRIGI*PVKRNF*FYV*LFFQFFSQSWG*ISRKVVKCVDFNYFYFFFFYFLCGGQ*FFYQSSMHKRRGYDFSR
SMTQWAL*IHIGIQRLCGSFPNNF*QPHVCESQYGNL*FIFF*FFF*NIDNRFFV*RVLHINKINYDHTANIP*FQLPSY
FFGCFHICNKRSFFNILPL*ISSRIYIDGC*SFRSIYRNCSSTR*FYLLCKDLFHLMVYIVDLKNISSYKLNFGF*FETF
QT
>Mature_242_residues
LFFVFNIVRIGI*PVKRNF*FYV*LFFQFFSQSWG*ISRKVVKCVDFNYFYFFFFYFLCGGQ*FFYQSSMHKRRGYDFSR
SMTQWAL*IHIGIQRLCGSFPNNF*QPHVCESQYGNL*FIFF*FFF*NIDNRFFV*RVLHINKINYDHTANIP*FQLPSY
FFGCFHICNKRSFFNILPL*ISSRIYIDGC*SFRSIYRNCSSTR*FYLLCKDLFHLMVYIVDLKNISSYKLNFGF*FETF
QT

Specific function: Unknown

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27137; Mature: 27137

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LFFVFNIVRIGIPVKRNFFYVLFFQFFSQSWGISRKVVKCVDFNYFYFFFFYFLCGGQFF
CEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHH
YQSSMHKRRGYDFSRSMTQWALIHIGIQRLCGSFPNNFQPHVCESQYGNLFIFFFFFNID
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECC
NRFFVRVLHINKINYDHTANIPFQLPSYFFGCFHICNKRSFFNILPLISSRIYIDGCSFR
CEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCHH
SIYRNCSSTRFYLLCKDLFHLMVYIVDLKNISSYKLNFGFFETFQT
HHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA