| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902754
Identifier: 160902754
GI number: 160902754
Start: 1396800
End: 1398251
Strand: Direct
Name: 160902754
Synonym: Pmob_1307
Alternate gene names: NA
Gene position: 1396800-1398251 (Clockwise)
Preceding gene: 160902753
Following gene: 160902755
Centisome position: 64.38
GC content: 35.47
Gene sequence:
>1452_bases ATGCCTAAAGAGAGAGAATTTATTAAATCTTTTTTTCAGTTTTCAATGGGTCAATGGATAGCTGCTTTGATTTCCTTCAT CACTACTCCTATTACCACTTGGCTTATAATCCCAGAGGAGTTTGGTAAGGCATCGATGTTTACTTTGGCTTTCAATTTAC TTCTCAACGTTGCACTTCTTGGAGCGGATCAGAGCTTTGTTCGTATGTTTTATGAAAGGTCTGAGGATAAGAGAAGGGAT TTACTTTGGGATTCTTTGTTGCCGAGTTTGAGTATAGGCGTTGTTGTTTTTGTTGTCATTGGTATCTTTTGGAAAGAGTT GTCTTTCATTCTTTTTGGAGATTATAATCATTTTCTTCCGATTTTTTTGTTGGGCGTTACCATATTAATCGGTATTTTAG AGAGATTTTCCACTTTGGCTGTTCGGATGAAAAAAAGAGGTATCGCTTTTTCTACGTTGAGGGTAGTAAACGGAGTAACA AATGCGGTTTTTACAATTTTATACGCCCTTTTTGTTTCAAGAAGTTTTTATGCTGTTATCATTGGTTTGTTTTTTTCTCA TATAGTTACCGCTTTATTAGCGATCTTTTTTGAAAGAGAATTGTGGTTTGGTAAGTTCAAAGTTGATTTTAAATCTATAA AAGCGATTGTTAGGTACGGTCTCCCTTTTGTTCCTACTTTTTTAATTACTTGGCTTTTTCAATCGATAGATAGGTTGTCG TTAAGAAATTATTCTGATTTCACGGAGATAGGTTTGTATTCTGCTGCTTTCAAAGTAGTTTCAGTGATGAGCTTAATTCA AGCTGGTTTTACTACGTTTTGGACTCCCGTTTCTTATGAAAGCTACGAAAAAGAACCTGAGAGTAAGGGGATTTTTGAGA AGACCTCTGTGTTTATAGCCGCTGCGATGTTTGTGTTTGGATTGCTATTAGTTGTGTTTAAAGATGTGATATTTTTGCTT TTAGAGAGTTCTTATAGGCAGGCGGCTGGAATTAGCTCTTTTTTGATTTTGATGCCTATTATGTATACTGTTTCTGAAAC GACGGTTGTTGGTATCAATTTTAAGAAAAAAACATATTGGCATATGTTGATAGCAACTGTGGCAGCAGGGGTTAACGTGT TTGGGAATTTGATGCTTGTTCCTGTATATGGTGCAAAAGGTGCAGCATTTTCTACTGGGGTGTCGTATATAGTTTTCTTT TGTATGAGGACGTTTATATCTAAAAGATTGTTTCCTGTGAAATATCATTTGGGTAAATTTTTTATTAGTACGTTTGTTTT TGTGGTCGTTGCTTTTATAAACACTTTTGTTCCTAATATAGTTTTTCAGGTTGTATCTGCTGTTTTGGGTTTGGTTGTTG TGATGCTTGTGTATAGAGATCAGGTAAAATATGTGTTTAATTTGGGGGTTGGTTTAGTGAGGGAAGTGAAGGAGAGGGTA GTTAGTAGGTGA
Upstream 100 bases:
>100_bases AGTTATTTAAGAAAAAGGGCTTTGGGGTTTTCGTGGGAGAGTATTGTAGAAAAGGAAATAGAGGTGTATAACGAAGCTTT AAATAGATTTGGAGGAAGTA
Downstream 100 bases:
>100_bases AATTATGAAAATTCTAAGTTATAGAATCTTACTTAAGAAAGAAGCTGAAGGAGGTTATACCGTTATAGTCCCTCTTCTTC CAGGATGTGTTACATACGGA
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis Protein; Polysaccharide Biosynthesis Family Protein; Polysaccharide Transporter; Cytosol Aminopeptidase; Polysaccharide Biosynthesis Protein-Like Protein
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MPKEREFIKSFFQFSMGQWIAALISFITTPITTWLIIPEEFGKASMFTLAFNLLLNVALLGADQSFVRMFYERSEDKRRD LLWDSLLPSLSIGVVVFVVIGIFWKELSFILFGDYNHFLPIFLLGVTILIGILERFSTLAVRMKKRGIAFSTLRVVNGVT NAVFTILYALFVSRSFYAVIIGLFFSHIVTALLAIFFERELWFGKFKVDFKSIKAIVRYGLPFVPTFLITWLFQSIDRLS LRNYSDFTEIGLYSAAFKVVSVMSLIQAGFTTFWTPVSYESYEKEPESKGIFEKTSVFIAAAMFVFGLLLVVFKDVIFLL LESSYRQAAGISSFLILMPIMYTVSETTVVGINFKKKTYWHMLIATVAAGVNVFGNLMLVPVYGAKGAAFSTGVSYIVFF CMRTFISKRLFPVKYHLGKFFISTFVFVVVAFINTFVPNIVFQVVSAVLGLVVVMLVYRDQVKYVFNLGVGLVREVKERV VSR
Sequences:
>Translated_483_residues MPKEREFIKSFFQFSMGQWIAALISFITTPITTWLIIPEEFGKASMFTLAFNLLLNVALLGADQSFVRMFYERSEDKRRD LLWDSLLPSLSIGVVVFVVIGIFWKELSFILFGDYNHFLPIFLLGVTILIGILERFSTLAVRMKKRGIAFSTLRVVNGVT NAVFTILYALFVSRSFYAVIIGLFFSHIVTALLAIFFERELWFGKFKVDFKSIKAIVRYGLPFVPTFLITWLFQSIDRLS LRNYSDFTEIGLYSAAFKVVSVMSLIQAGFTTFWTPVSYESYEKEPESKGIFEKTSVFIAAAMFVFGLLLVVFKDVIFLL LESSYRQAAGISSFLILMPIMYTVSETTVVGINFKKKTYWHMLIATVAAGVNVFGNLMLVPVYGAKGAAFSTGVSYIVFF CMRTFISKRLFPVKYHLGKFFISTFVFVVVAFINTFVPNIVFQVVSAVLGLVVVMLVYRDQVKYVFNLGVGLVREVKERV VSR >Mature_482_residues PKEREFIKSFFQFSMGQWIAALISFITTPITTWLIIPEEFGKASMFTLAFNLLLNVALLGADQSFVRMFYERSEDKRRDL LWDSLLPSLSIGVVVFVVIGIFWKELSFILFGDYNHFLPIFLLGVTILIGILERFSTLAVRMKKRGIAFSTLRVVNGVTN AVFTILYALFVSRSFYAVIIGLFFSHIVTALLAIFFERELWFGKFKVDFKSIKAIVRYGLPFVPTFLITWLFQSIDRLSL RNYSDFTEIGLYSAAFKVVSVMSLIQAGFTTFWTPVSYESYEKEPESKGIFEKTSVFIAAAMFVFGLLLVVFKDVIFLLL ESSYRQAAGISSFLILMPIMYTVSETTVVGINFKKKTYWHMLIATVAAGVNVFGNLMLVPVYGAKGAAFSTGVSYIVFFC MRTFISKRLFPVKYHLGKFFISTFVFVVVAFINTFVPNIVFQVVSAVLGLVVVMLVYRDQVKYVFNLGVGLVREVKERVV SR
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54957; Mature: 54826
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKEREFIKSFFQFSMGQWIAALISFITTPITTWLIIPEEFGKASMFTLAFNLLLNVALL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCHHHHHHHHHHHHHHHHH GADQSFVRMFYERSEDKRRDLLWDSLLPSLSIGVVVFVVIGIFWKELSFILFGDYNHFLP CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHH IFLLGVTILIGILERFSTLAVRMKKRGIAFSTLRVVNGVTNAVFTILYALFVSRSFYAVI HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGLFFSHIVTALLAIFFERELWFGKFKVDFKSIKAIVRYGLPFVPTFLITWLFQSIDRLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LRNYSDFTEIGLYSAAFKVVSVMSLIQAGFTTFWTPVSYESYEKEPESKGIFEKTSVFIA HCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHH AAMFVFGLLLVVFKDVIFLLLESSYRQAAGISSFLILMPIMYTVSETTVVGINFKKKTYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH HMLIATVAAGVNVFGNLMLVPVYGAKGAAFSTGVSYIVFFCMRTFISKRLFPVKYHLGKF HHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FISTFVFVVVAFINTFVPNIVFQVVSAVLGLVVVMLVYRDQVKYVFNLGVGLVREVKERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSR CCC >Mature Secondary Structure PKEREFIKSFFQFSMGQWIAALISFITTPITTWLIIPEEFGKASMFTLAFNLLLNVALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCHHHHHHHHHHHHHHHHH GADQSFVRMFYERSEDKRRDLLWDSLLPSLSIGVVVFVVIGIFWKELSFILFGDYNHFLP CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHH IFLLGVTILIGILERFSTLAVRMKKRGIAFSTLRVVNGVTNAVFTILYALFVSRSFYAVI HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGLFFSHIVTALLAIFFERELWFGKFKVDFKSIKAIVRYGLPFVPTFLITWLFQSIDRLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LRNYSDFTEIGLYSAAFKVVSVMSLIQAGFTTFWTPVSYESYEKEPESKGIFEKTSVFIA HCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHH AAMFVFGLLLVVFKDVIFLLLESSYRQAAGISSFLILMPIMYTVSETTVVGINFKKKTYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH HMLIATVAAGVNVFGNLMLVPVYGAKGAAFSTGVSYIVFFCMRTFISKRLFPVKYHLGKF HHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FISTFVFVVVAFINTFVPNIVFQVVSAVLGLVVVMLVYRDQVKYVFNLGVGLVREVKERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA