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The map label for this gene is ylbK [H]

Identifier: 160902097

GI number: 160902097

Start: 674131

End: 674934

Strand: Direct

Name: ylbK [H]

Synonym: Pmob_0621

Alternate gene names: 160902097

Gene position: 674131-674934 (Clockwise)

Preceding gene: 160902096

Following gene: 160902098

Centisome position: 31.07

GC content: 34.95

Gene sequence:

>804_bases
TTGCTTGGGGTTGCTTTATCTGGAGGTGGGGCCAAAGGCGCTGCCCACGTTGGAGCACTTTTAGAACTTGAAAAAATGGG
AATTAAATTTGATATCGTTGTTGGCACAAGTATTGGCGCACTCGTAGGTGCTGGGTATGCCATTTTAGGTAATTCCAACT
TATTGTATGAATACGCTTTAAGGTTACAAAAAGCTCCTTTTATAAAAAAAGCACCCTCATCTCGTAAAATACCATCTATT
TTGACGTGTATAGGTGCAAACTTGCTACCATCGGCTTTACCTTCTTTTCTTTATTTTTATATATTAAAAAGGATATTTAA
AGACGTCACCTTTGAAGATTTGAAAATTAAATTCTATTGTACAGCGGTAAAAATGGATAGTGGAGATTTGGTAATTTTTC
GTGAAGGACCTTTATTCCCAGCTTTAAAGGCTAGCATGGCGATGCCTGGTGCATTCAGGCCCTTTAAAATAAACGGTAGC
AAATACATAGATGGTGGAACTTTGGAAAAGCTACCTATTTTAACGGCTAAAAAAGTTGGAGCTGATAAAATTATCGCCCT
AAAACTTTTATCAAAAAAGATAAAATATGAGGAAATAAAAAATGCCTCCCAAGCTTTTGATAGGATGGATACAATAAGAG
AAAATATATATGATAATTTAACAGAAAAATTTGCTAACGTACTTATCGAATTGCCCACAGAAGACTTTAATACTTTAGAT
TTCACACAAACAGAAGCTTTAATAGATACTGGGAGAAGGGCTGTTTTAGAAAGAAAAGAAGAAATCTTGGAGAAAATATC
ATGA

Upstream 100 bases:

>100_bases
GTGGAGGCGGTGGACCAACTTTTGCACAAGCCGGCGGAAAATATGCTAATAAGGTGAAAGAAGTGATAGAACACATAAAT
GATTTTATGGAGGTTTAATA

Downstream 100 bases:

>100_bases
TTTTAGTAAGTGGAGGATTTGGATGGCAAGGAATTAAAGCAGCTGAAAACTTAAAAGATTTGGATCTATCCAGTTATGAT
AAAATCATCACCAACGGCAT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MLGVALSGGGAKGAAHVGALLELEKMGIKFDIVVGTSIGALVGAGYAILGNSNLLYEYALRLQKAPFIKKAPSSRKIPSI
LTCIGANLLPSALPSFLYFYILKRIFKDVTFEDLKIKFYCTAVKMDSGDLVIFREGPLFPALKASMAMPGAFRPFKINGS
KYIDGGTLEKLPILTAKKVGADKIIALKLLSKKIKYEEIKNASQAFDRMDTIRENIYDNLTEKFANVLIELPTEDFNTLD
FTQTEALIDTGRRAVLERKEEILEKIS

Sequences:

>Translated_267_residues
MLGVALSGGGAKGAAHVGALLELEKMGIKFDIVVGTSIGALVGAGYAILGNSNLLYEYALRLQKAPFIKKAPSSRKIPSI
LTCIGANLLPSALPSFLYFYILKRIFKDVTFEDLKIKFYCTAVKMDSGDLVIFREGPLFPALKASMAMPGAFRPFKINGS
KYIDGGTLEKLPILTAKKVGADKIIALKLLSKKIKYEEIKNASQAFDRMDTIRENIYDNLTEKFANVLIELPTEDFNTLD
FTQTEALIDTGRRAVLERKEEILEKIS
>Mature_267_residues
MLGVALSGGGAKGAAHVGALLELEKMGIKFDIVVGTSIGALVGAGYAILGNSNLLYEYALRLQKAPFIKKAPSSRKIPSI
LTCIGANLLPSALPSFLYFYILKRIFKDVTFEDLKIKFYCTAVKMDSGDLVIFREGPLFPALKASMAMPGAFRPFKINGS
KYIDGGTLEKLPILTAKKVGADKIIALKLLSKKIKYEEIKNASQAFDRMDTIRENIYDNLTEKFANVLIELPTEDFNTLD
FTQTEALIDTGRRAVLERKEEILEKIS

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=195, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI260656041, Length=195, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI260656039, Length=195, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI260656037, Length=195, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI116256487, Length=195, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI148727335, Length=193, Percent_Identity=30.5699481865285, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI148727290, Length=193, Percent_Identity=30.5699481865285, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71997289, Length=169, Percent_Identity=27.810650887574, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71997299, Length=169, Percent_Identity=27.810650887574, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29365; Mature: 29365

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVALSGGGAKGAAHVGALLELEKMGIKFDIVVGTSIGALVGAGYAILGNSNLLYEYAL
CEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEECCCCHHHHHHH
RLQKAPFIKKAPSSRKIPSILTCIGANLLPSALPSFLYFYILKRIFKDVTFEDLKIKFYC
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEE
TAVKMDSGDLVIFREGPLFPALKASMAMPGAFRPFKINGSKYIDGGTLEKLPILTAKKVG
EEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCEEECCCEEECCCCCCCCCCHHHHHCC
ADKIIALKLLSKKIKYEEIKNASQAFDRMDTIRENIYDNLTEKFANVLIELPTEDFNTLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
FTQTEALIDTGRRAVLERKEEILEKIS
CHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGVALSGGGAKGAAHVGALLELEKMGIKFDIVVGTSIGALVGAGYAILGNSNLLYEYAL
CEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEECCCCHHHHHHH
RLQKAPFIKKAPSSRKIPSILTCIGANLLPSALPSFLYFYILKRIFKDVTFEDLKIKFYC
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEE
TAVKMDSGDLVIFREGPLFPALKASMAMPGAFRPFKINGSKYIDGGTLEKLPILTAKKVG
EEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCEEECCCEEECCCCCCCCCCHHHHHCC
ADKIIALKLLSKKIKYEEIKNASQAFDRMDTIRENIYDNLTEKFANVLIELPTEDFNTLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC
FTQTEALIDTGRRAVLERKEEILEKIS
CHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]