Click here to switch to the map view.

The map label for this gene is ybbK [C]

Identifier: 160902040

GI number: 160902040

Start: 615601

End: 616530

Strand: Direct

Name: ybbK [C]

Synonym: Pmob_0564

Alternate gene names: 160902040

Gene position: 615601-616530 (Clockwise)

Preceding gene: 160902039

Following gene: 160902041

Centisome position: 28.37

GC content: 35.48

Gene sequence:

>930_bases
ATGTTGGTAATATTGATAATAGCAGTTTTGTTTTTGATCTTTATTGCTGCAATGAGTTTAAGAATTATCCGCCCTTACGA
AAAAGGTTTGGTAGAAAGATTAGGAAAATTTCATAGACAGGTTGATTCTGGATTAAATTTCATCATGCCTTTCATAGAAA
GAATAACCAAAGTAGATTTAAGAGAAATGTTGATAGATGTTCCACCTCAAGAGGTTATCACTAGGGATAACGTTATAGTT
ACCGTTGATGCTGTTATATATTACGAGATAACTGATGCTTATAGAGTAGTCTACAACGTTGGAGATTTTACTTCGGCGGC
TGTTAAATTGGCTCAAACAAATTTAAGAAACGTTATCGGAGAATTAGAATTAGACCAAACATTAACCTCTAGAGAAAGAA
TCAACACAAAACTCAGAGAAGTATTAGATGAAGCCACCGATAAATGGGGAGTAAGAATCACCAGAGTGGAGATCAAAAAG
ATCGATCCTCCTCAAGATATTATGGATGCAATGAGCAAGCAAATGAAAGCCGAAAGAATGAAAAGAGCTGTTATTTTAGA
GGCTGAAGGGTACAAACAATCACAAATTACCAGAGCAGAAGGAGACAGAAATGCTGCAATATTAAAAGCAGAAGGTGAAG
CGGAAGCCGTTAAGAAAAAAGCAGATGCTCAAAAGTATAAATTAAGTATCGAAGCAGACGGAGAAGCTGAGGCAATTCTT
AAAGTTTTCGACTCAATCCATAAAGGCAATCCTACAAAAGATTTGATAACAATAAGGTACTTTGAGGCATTAAAAGCAAT
CTCAGACGGGAAATCAACAAAGGTCTTTATGCCTTATGAAATTTCGGGAATATTGAGCTCTGTAGCTGCTATGGCAGACA
TTTCGAAAAACGATATAATCTCTGATAGCAATCCAGAAAATAAAGAATAA

Upstream 100 bases:

>100_bases
AAAAAAAATCAATGCATCTGAAAATAATCAAAAAAAAGAGACGGGGGAATAAAATGTTTTTTAGTGACCACAATTTGAAA
AAGAAAGGTGGGGAAAAACA

Downstream 100 bases:

>100_bases
AATTCTGAGGTAATTTTTATGGTATTATTAAAGTCTTTGTTTATCAATGCAATCAGTTTTTTAATAGCATTTGCTGTTAT
TAGACTTTTGATCATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLVILIIAVLFLIFIAAMSLRIIRPYEKGLVERLGKFHRQVDSGLNFIMPFIERITKVDLREMLIDVPPQEVITRDNVIV
TVDAVIYYEITDAYRVVYNVGDFTSAAVKLAQTNLRNVIGELELDQTLTSRERINTKLREVLDEATDKWGVRITRVEIKK
IDPPQDIMDAMSKQMKAERMKRAVILEAEGYKQSQITRAEGDRNAAILKAEGEAEAVKKKADAQKYKLSIEADGEAEAIL
KVFDSIHKGNPTKDLITIRYFEALKAISDGKSTKVFMPYEISGILSSVAAMADISKNDIISDSNPENKE

Sequences:

>Translated_309_residues
MLVILIIAVLFLIFIAAMSLRIIRPYEKGLVERLGKFHRQVDSGLNFIMPFIERITKVDLREMLIDVPPQEVITRDNVIV
TVDAVIYYEITDAYRVVYNVGDFTSAAVKLAQTNLRNVIGELELDQTLTSRERINTKLREVLDEATDKWGVRITRVEIKK
IDPPQDIMDAMSKQMKAERMKRAVILEAEGYKQSQITRAEGDRNAAILKAEGEAEAVKKKADAQKYKLSIEADGEAEAIL
KVFDSIHKGNPTKDLITIRYFEALKAISDGKSTKVFMPYEISGILSSVAAMADISKNDIISDSNPENKE
>Mature_309_residues
MLVILIIAVLFLIFIAAMSLRIIRPYEKGLVERLGKFHRQVDSGLNFIMPFIERITKVDLREMLIDVPPQEVITRDNVIV
TVDAVIYYEITDAYRVVYNVGDFTSAAVKLAQTNLRNVIGELELDQTLTSRERINTKLREVLDEATDKWGVRITRVEIKK
IDPPQDIMDAMSKQMKAERMKRAVILEAEGYKQSQITRAEGDRNAAILKAEGEAEAVKKKADAQKYKLSIEADGEAEAIL
KVFDSIHKGNPTKDLITIRYFEALKAISDGKSTKVFMPYEISGILSSVAAMADISKNDIISDSNPENKE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=197, Percent_Identity=42.1319796954315, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI221316744, Length=191, Percent_Identity=42.4083769633508, Blast_Score=141, Evalue=7e-34,
Organism=Homo sapiens, GI21686995, Length=212, Percent_Identity=39.622641509434, Blast_Score=141, Evalue=7e-34,
Organism=Homo sapiens, GI38016911, Length=175, Percent_Identity=41.1428571428571, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI7657615, Length=186, Percent_Identity=26.8817204301075, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI20149563, Length=169, Percent_Identity=28.4023668639053, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1786697, Length=309, Percent_Identity=37.2168284789644, Blast_Score=230, Evalue=9e-62,
Organism=Escherichia coli, GI1790617, Length=269, Percent_Identity=27.1375464684015, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790616, Length=224, Percent_Identity=25.8928571428571, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32564147, Length=232, Percent_Identity=39.6551724137931, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17569499, Length=297, Percent_Identity=33.6700336700337, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17569493, Length=194, Percent_Identity=37.6288659793814, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI193209764, Length=194, Percent_Identity=37.6288659793814, Blast_Score=134, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI71987612, Length=168, Percent_Identity=40.4761904761905, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI25153583, Length=168, Percent_Identity=40.4761904761905, Blast_Score=131, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI71987621, Length=198, Percent_Identity=38.8888888888889, Blast_Score=129, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI32566490, Length=199, Percent_Identity=37.6884422110553, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17569497, Length=195, Percent_Identity=35.8974358974359, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989948, Length=266, Percent_Identity=32.7067669172932, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71989955, Length=156, Percent_Identity=40.3846153846154, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI193210507, Length=191, Percent_Identity=38.2198952879581, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17570161, Length=191, Percent_Identity=38.2198952879581, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17570459, Length=198, Percent_Identity=35.8585858585859, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=37.8151260504202, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17542664, Length=166, Percent_Identity=29.5180722891566, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI45550506, Length=296, Percent_Identity=33.1081081081081, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI45556022, Length=193, Percent_Identity=38.860103626943, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI18860517, Length=194, Percent_Identity=40.2061855670103, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24657857, Length=216, Percent_Identity=36.5740740740741, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281365664, Length=216, Percent_Identity=36.5740740740741, Blast_Score=127, Evalue=8e-30,
Organism=Drosophila melanogaster, GI62484448, Length=216, Percent_Identity=36.5740740740741, Blast_Score=127, Evalue=9e-30,
Organism=Drosophila melanogaster, GI62484274, Length=216, Percent_Identity=36.5740740740741, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI21356845, Length=190, Percent_Identity=31.5789473684211, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28573263, Length=281, Percent_Identity=28.1138790035587, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281361633, Length=189, Percent_Identity=31.7460317460317, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI281361631, Length=189, Percent_Identity=31.7460317460317, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI281361635, Length=131, Percent_Identity=34.3511450381679, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34824; Mature: 34824

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVILIIAVLFLIFIAAMSLRIIRPYEKGLVERLGKFHRQVDSGLNFIMPFIERITKVDL
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
REMLIDVPPQEVITRDNVIVTVDAVIYYEITDAYRVVYNVGDFTSAAVKLAQTNLRNVIG
HHHHHCCCCHHHHCCCCEEEEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ELELDQTLTSRERINTKLREVLDEATDKWGVRITRVEIKKIDPPQDIMDAMSKQMKAERM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
KRAVILEAEGYKQSQITRAEGDRNAAILKAEGEAEAVKKKADAQKYKLSIEADGEAEAIL
HHEEEEECCCCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHCHHHEEEEEECCCHHHHHH
KVFDSIHKGNPTKDLITIRYFEALKAISDGKSTKVFMPYEISGILSSVAAMADISKNDII
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCC
SDSNPENKE
CCCCCCCCC
>Mature Secondary Structure
MLVILIIAVLFLIFIAAMSLRIIRPYEKGLVERLGKFHRQVDSGLNFIMPFIERITKVDL
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
REMLIDVPPQEVITRDNVIVTVDAVIYYEITDAYRVVYNVGDFTSAAVKLAQTNLRNVIG
HHHHHCCCCHHHHCCCCEEEEEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ELELDQTLTSRERINTKLREVLDEATDKWGVRITRVEIKKIDPPQDIMDAMSKQMKAERM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
KRAVILEAEGYKQSQITRAEGDRNAAILKAEGEAEAVKKKADAQKYKLSIEADGEAEAIL
HHEEEEECCCCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHCHHHEEEEEECCCHHHHHH
KVFDSIHKGNPTKDLITIRYFEALKAISDGKSTKVFMPYEISGILSSVAAMADISKNDII
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCC
SDSNPENKE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]