Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 160901953

GI number: 160901953

Start: 513092

End: 513922

Strand: Direct

Name: ycjP [C]

Synonym: Pmob_0475

Alternate gene names: 160901953

Gene position: 513092-513922 (Clockwise)

Preceding gene: 160901952

Following gene: 160901961

Centisome position: 23.65

GC content: 30.69

Gene sequence:

>831_bases
ATGAAGAAAAAAATTTTGCCTAAATTTATACGTATAATTTTACTATCTATGTTTTTTATTTTTGCAAGTTTCCCGTTATA
TTGGATTATACTAACTTCGTTAAAACCACCCCAAGAAATATACTCCTTTCCAATTAGGTATTGGACAAATAATCCTACTC
TATTAGGGTACAAGAGATTATTTGAATTCGTCAATTTTAAAAGGTATTTTGTAAACAGTATTTTCGTATCTTTAGGCGCT
TCCTTTGTTTCAACAATATTTGCCATGCTAAGTGGGTATATACTTTCAAGAAAAGAATTCAAATGGAAATATCCTATTAT
ATTATTTTTATTTTTTTCTCAGATGATCCCAACTTATTTAATCATGGTTCCACAATATACAATGTTTTCAAATTTAAATT
TAATCAACAAACTAATCAGCTTAGTAATAATTTATAGTGGTTTTGGAGCTGCTTTTAGTACAATAATGGCTAAGGGTTTT
TTTGATAGAATTCCAAAAAGTATCGAAGAAGCTGCTTTAATTGACGGATGTAATGAAATCCAATCTCTATTTAAAATCAC
TATTCCCTTAATGTTACCTGGTTTATCGGCTATTCTTAGTTTTTCTTTTGTAAATAACTGGAATGAGCTGTTTACTGCTG
TGATGTTTTTAAACACCTCCGACAAATATACCGTACCTGTTGGGCTATATTCTATTGTATCAAAGGCAGGTGTTCAGTGG
AATGTGCTGGCTGCTGGAATTGTGATCGCTCTTTTACCAACAATTATAGTATTTTCGATCTCTCAAAAGTATATTATTGC
AGGCCTTACACAGGGAAGTTTAAAAGACTGA

Upstream 100 bases:

>100_bases
ACTATAGTAAAGCCGCAGCACATGGTGTAGTTATCATTTTAATTCTTTTCATTTATACTATGATGTACTTAAAATTAACT
TCTAAACGGGAGTTTAGCCT

Downstream 100 bases:

>100_bases
TAAGGATTTTAAAACAATCATTTCTTCTTTCACCAAAAAAGCTTTAGGAAAAAACTAAAAAAATTTCAAAAAATATGCTT
CACCCAAAAAGATAGAAAAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKKKILPKFIRIILLSMFFIFASFPLYWIILTSLKPPQEIYSFPIRYWTNNPTLLGYKRLFEFVNFKRYFVNSIFVSLGA
SFVSTIFAMLSGYILSRKEFKWKYPIILFLFFSQMIPTYLIMVPQYTMFSNLNLINKLISLVIIYSGFGAAFSTIMAKGF
FDRIPKSIEEAALIDGCNEIQSLFKITIPLMLPGLSAILSFSFVNNWNELFTAVMFLNTSDKYTVPVGLYSIVSKAGVQW
NVLAAGIVIALLPTIIVFSISQKYIIAGLTQGSLKD

Sequences:

>Translated_276_residues
MKKKILPKFIRIILLSMFFIFASFPLYWIILTSLKPPQEIYSFPIRYWTNNPTLLGYKRLFEFVNFKRYFVNSIFVSLGA
SFVSTIFAMLSGYILSRKEFKWKYPIILFLFFSQMIPTYLIMVPQYTMFSNLNLINKLISLVIIYSGFGAAFSTIMAKGF
FDRIPKSIEEAALIDGCNEIQSLFKITIPLMLPGLSAILSFSFVNNWNELFTAVMFLNTSDKYTVPVGLYSIVSKAGVQW
NVLAAGIVIALLPTIIVFSISQKYIIAGLTQGSLKD
>Mature_276_residues
MKKKILPKFIRIILLSMFFIFASFPLYWIILTSLKPPQEIYSFPIRYWTNNPTLLGYKRLFEFVNFKRYFVNSIFVSLGA
SFVSTIFAMLSGYILSRKEFKWKYPIILFLFFSQMIPTYLIMVPQYTMFSNLNLINKLISLVIIYSGFGAAFSTIMAKGF
FDRIPKSIEEAALIDGCNEIQSLFKITIPLMLPGLSAILSFSFVNNWNELFTAVMFLNTSDKYTVPVGLYSIVSKAGVQW
NVLAAGIVIALLPTIIVFSISQKYIIAGLTQGSLKD

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=263, Percent_Identity=31.9391634980989, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1790464, Length=192, Percent_Identity=29.6875, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789860, Length=265, Percent_Identity=20.7547169811321, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31505; Mature: 31505

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKILPKFIRIILLSMFFIFASFPLYWIILTSLKPPQEIYSFPIRYWTNNPTLLGYKRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHEECCCCCCHHHHHH
FEFVNFKRYFVNSIFVSLGASFVSTIFAMLSGYILSRKEFKWKYPIILFLFFSQMIPTYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IMVPQYTMFSNLNLINKLISLVIIYSGFGAAFSTIMAKGFFDRIPKSIEEAALIDGCNEI
HHHCCHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
QSLFKITIPLMLPGLSAILSFSFVNNWNELFTAVMFLNTSDKYTVPVGLYSIVSKAGVQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCCH
NVLAAGIVIALLPTIIVFSISQKYIIAGLTQGSLKD
HHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]