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The map label for this gene is ylbK [H]

Identifier: 160901509

GI number: 160901509

Start: 16798

End: 17598

Strand: Direct

Name: ylbK [H]

Synonym: Pmob_0018

Alternate gene names: 160901509

Gene position: 16798-17598 (Clockwise)

Preceding gene: 160901508

Following gene: 160901510

Centisome position: 0.77

GC content: 34.71

Gene sequence:

>801_bases
ATGGTTTACGGAATAGCTTTAGGGAGTGGTGGCGCTAGAGGAGCCGCTCACGTTGCCTTAATAGATGAACTGAAAGAAAG
AACAATAAAGATCGAAGTAGTAACAGGATCGAGCGTAGGTGCATTAGTAGGTGCCCTCTATGCTTTAAATCCTGATGTAG
ACCTATTTCAAATATTCAAAGACTTGACCCTTAAAAAGAAAAAAATGATAGATTCACAGTTTAGAACTCTAAACAACAGA
ATTACTAATTTCCCTAAAATGGTTGCAGGTAAAAGTTTTTTAAAAAGTGATTTCGTTTACGATATTTACAAGCAGTTGTA
TGGACGTAAACGTTTTTCCGATTGTAAGATAAAATTAGGAATCGTTTCATATGATTTAGAAAGCGGTGAAGAAGTGGAGA
TCACAGAAGGGTACATTATCGATGCTGTTATGGCTTCCTCAAGTGTTCCCGGCGTTTCCCCTCCTTTAAGGTTAGGGGGC
ATGAGCCTGTTGGATGGAGGCGTTTTAACTCCTGTTCCAGTAAAATTAACTAAAAAACTAGGAGCAGATTATGTAATAGC
AAGTAATTTAAATGGTGAGGTTAAGAATGATTTTAAGTTTAACGACGGATTAGATTATATTATTTCCATTGAAGATTTTA
AAAATGATCTTATGGTTAACTATGAAATAAATATAGCCGAAGAGGTTTATACATTCCCAATAGAGTATTCTTGGGAAGGA
TTTTCTTATTTTAACGAAATATACCAAGATGCTAAAAATTTTTTAAAATCCATACAAAATAAAGCGAGGGAACAACTTTG
A

Upstream 100 bases:

>100_bases
ACCTAATCAGACTTATATTTCATCAATAATTATAGGACTTGTGGGGGTTTTGGTTGGTGCAGGAATTGTTTTATTATTCC
AATAATTGCGGGAGGGAACC

Downstream 100 bases:

>100_bases
ACTTAGTAATGGGTGGCTTTTTTGAAGGATTTTATTGGGAATCTGGCGTTTTAGAGTCTATAGCAAAAAAAGAAAACGCC
TTAAATCTATATACTTCTAG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MVYGIALGSGGARGAAHVALIDELKERTIKIEVVTGSSVGALVGALYALNPDVDLFQIFKDLTLKKKKMIDSQFRTLNNR
ITNFPKMVAGKSFLKSDFVYDIYKQLYGRKRFSDCKIKLGIVSYDLESGEEVEITEGYIIDAVMASSSVPGVSPPLRLGG
MSLLDGGVLTPVPVKLTKKLGADYVIASNLNGEVKNDFKFNDGLDYIISIEDFKNDLMVNYEINIAEEVYTFPIEYSWEG
FSYFNEIYQDAKNFLKSIQNKAREQL

Sequences:

>Translated_266_residues
MVYGIALGSGGARGAAHVALIDELKERTIKIEVVTGSSVGALVGALYALNPDVDLFQIFKDLTLKKKKMIDSQFRTLNNR
ITNFPKMVAGKSFLKSDFVYDIYKQLYGRKRFSDCKIKLGIVSYDLESGEEVEITEGYIIDAVMASSSVPGVSPPLRLGG
MSLLDGGVLTPVPVKLTKKLGADYVIASNLNGEVKNDFKFNDGLDYIISIEDFKNDLMVNYEINIAEEVYTFPIEYSWEG
FSYFNEIYQDAKNFLKSIQNKAREQL
>Mature_266_residues
MVYGIALGSGGARGAAHVALIDELKERTIKIEVVTGSSVGALVGALYALNPDVDLFQIFKDLTLKKKKMIDSQFRTLNNR
ITNFPKMVAGKSFLKSDFVYDIYKQLYGRKRFSDCKIKLGIVSYDLESGEEVEITEGYIIDAVMASSSVPGVSPPLRLGG
MSLLDGGVLTPVPVKLTKKLGADYVIASNLNGEVKNDFKFNDGLDYIISIEDFKNDLMVNYEINIAEEVYTFPIEYSWEG
FSYFNEIYQDAKNFLKSIQNKAREQL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=207, Percent_Identity=27.0531400966184, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI148727290, Length=207, Percent_Identity=27.0531400966184, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI260656043, Length=204, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI260656041, Length=204, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI260656039, Length=204, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI260656037, Length=204, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI116256487, Length=204, Percent_Identity=25.4901960784314, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI226510936, Length=226, Percent_Identity=31.858407079646, Blast_Score=117, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6323581, Length=204, Percent_Identity=30.3921568627451, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29654; Mature: 29654

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYGIALGSGGARGAAHVALIDELKERTIKIEVVTGSSVGALVGALYALNPDVDLFQIFK
CEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHH
DLTLKKKKMIDSQFRTLNNRITNFPKMVAGKSFLKSDFVYDIYKQLYGRKRFSDCKIKLG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
IVSYDLESGEEVEITEGYIIDAVMASSSVPGVSPPLRLGGMSLLDGGVLTPVPVKLTKKL
EEEEECCCCCEEEEECCEEEEHHHHCCCCCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHC
GADYVIASNLNGEVKNDFKFNDGLDYIISIEDFKNDLMVNYEINIAEEVYTFPIEYSWEG
CCCEEEEECCCCCCCCCCEECCCCEEEEEEEECCCCEEEEEEEEEHHHEEEECEEECCCH
FSYFNEIYQDAKNFLKSIQNKAREQL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVYGIALGSGGARGAAHVALIDELKERTIKIEVVTGSSVGALVGALYALNPDVDLFQIFK
CEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHH
DLTLKKKKMIDSQFRTLNNRITNFPKMVAGKSFLKSDFVYDIYKQLYGRKRFSDCKIKLG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
IVSYDLESGEEVEITEGYIIDAVMASSSVPGVSPPLRLGGMSLLDGGVLTPVPVKLTKKL
EEEEECCCCCEEEEECCEEEEHHHHCCCCCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHC
GADYVIASNLNGEVKNDFKFNDGLDYIISIEDFKNDLMVNYEINIAEEVYTFPIEYSWEG
CCCEEEEECCCCCCCCCCEECCCCEEEEEEEECCCCEEEEEEEEEHHHEEEECEEECCCH
FSYFNEIYQDAKNFLKSIQNKAREQL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]