| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is menB [H]
Identifier: 160877601
GI number: 160877601
Start: 5322467
End: 5323372
Strand: Direct
Name: menB [H]
Synonym: Sbal195_4500
Alternate gene names: 160877601
Gene position: 5322467-5323372 (Clockwise)
Preceding gene: 160877600
Following gene: 160877602
Centisome position: 99.54
GC content: 50.0
Gene sequence:
>906_bases ATGACCCAACAAGTATCAGACATTTTTGATCCCACCCTATGGGATGAAGTCAGTGGATTTCAATTCGACGACATCACCTA CCACAGAGCTAAAGCCCACGGCACAGTTCGCATTGCCATTAACCGCCCTGAGTGCCGCAACGCCTTCAGACCTAAAACCG TTGATGAGTTATTTATCGCACTCGATCATGCGCGCCAATGGTCTGATGTAGGTTGTGTACTGCTAACAGGTAATGGTCCT TCGGCAAAAGATGGTGGCTGGGCGTTCTGTTCGGGTGGCGATCAACGTATTCGCGGCAAAGATGGCTATAAATATGAAGG CGCCGAAGAAGGTAAAGCCGATCAAGCCAGAATGGGCCGCTTACATATATTAGAAGTGCAACGCTTGATCCGCTTTATGC CTAAAGTGGTCATCGCCGTTGTGCCGGGTTGGGCGGTAGGTGGCGGCCATAGCTTACACGTAGTATGCGACTTAACCTTA GCCTCGAAAGAACACGCGATATTTAAGCAGACTGATCCCGACGTAGCGAGCTTCGACTCAGGTTATGGCAGCGCATATCT TGCCAAGATGATAGGTCAAAAACGTGCCCGCGAAATCTTCTTCTGTGGTTTTAACTACAGCGCCGATGAAGCCTTCGACA TGGGTATGGTCAATAAATCCGTTCCCCATGCAGAGCTAGAAACCGAGGCATTAATGTGGGCCAAAGAGATTAACTCTAAG TCGCCTACGGCAATGCGTATGCTTAAATACGGTTTTAACATGACAGATGATGGTATGGTCGGTCAGCAATTATTCGCCGG TGAAGCGACGCGTTTAGCCTATGCGAGCGCCGAAGCGCAGGAAGGGCGCGATGCCTTCCTCGAGAAACGCGATCAAGATT TCTCCGCCTTCCCTTGGCATTACTAG
Upstream 100 bases:
>100_bases GGATTTTGCTATATAGCGCTAAGCTTTAGGCTTAGGTGATTGACCTTATATATGATTCCGCCTAGCCTTTGAGGCATTAC AGCACAAAGGCCTATGAATC
Downstream 100 bases:
>100_bases TTTATTAGCAGTGCTTTAATTTACTGCTAGCAGCCCAAAGCCCTCCAGAGTGAGGGCTTTATGTTTTTTACAACGGATAA ATAGATAAAACCGTTTAAAC
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTQQVSDIFDPTLWDEVSGFQFDDITYHRAKAHGTVRIAINRPECRNAFRPKTVDELFIALDHARQWSDVGCVLLTGNGP SAKDGGWAFCSGGDQRIRGKDGYKYEGAEEGKADQARMGRLHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTL ASKEHAIFKQTDPDVASFDSGYGSAYLAKMIGQKRAREIFFCGFNYSADEAFDMGMVNKSVPHAELETEALMWAKEINSK SPTAMRMLKYGFNMTDDGMVGQQLFAGEATRLAYASAEAQEGRDAFLEKRDQDFSAFPWHY
Sequences:
>Translated_301_residues MTQQVSDIFDPTLWDEVSGFQFDDITYHRAKAHGTVRIAINRPECRNAFRPKTVDELFIALDHARQWSDVGCVLLTGNGP SAKDGGWAFCSGGDQRIRGKDGYKYEGAEEGKADQARMGRLHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTL ASKEHAIFKQTDPDVASFDSGYGSAYLAKMIGQKRAREIFFCGFNYSADEAFDMGMVNKSVPHAELETEALMWAKEINSK SPTAMRMLKYGFNMTDDGMVGQQLFAGEATRLAYASAEAQEGRDAFLEKRDQDFSAFPWHY >Mature_300_residues TQQVSDIFDPTLWDEVSGFQFDDITYHRAKAHGTVRIAINRPECRNAFRPKTVDELFIALDHARQWSDVGCVLLTGNGPS AKDGGWAFCSGGDQRIRGKDGYKYEGAEEGKADQARMGRLHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLA SKEHAIFKQTDPDVASFDSGYGSAYLAKMIGQKRAREIFFCGFNYSADEAFDMGMVNKSVPHAELETEALMWAKEINSKS PTAMRMLKYGFNMTDDGMVGQQLFAGEATRLAYASAEAQEGRDAFLEKRDQDFSAFPWHY
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=288, Percent_Identity=29.5138888888889, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI31542718, Length=266, Percent_Identity=29.3233082706767, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1788597, Length=290, Percent_Identity=46.551724137931, Blast_Score=255, Evalue=2e-69, Organism=Escherichia coli, GI1787659, Length=264, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI87082183, Length=254, Percent_Identity=26.3779527559055, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1787660, Length=265, Percent_Identity=27.9245283018868, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI221142681, Length=271, Percent_Identity=25.4612546125461, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17554946, Length=254, Percent_Identity=27.5590551181102, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25145438, Length=268, Percent_Identity=27.9850746268657, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI20129971, Length=261, Percent_Identity=26.8199233716475, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24653477, Length=261, Percent_Identity=26.8199233716475, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24653139, Length=269, Percent_Identity=26.0223048327138, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 33557; Mature: 33426
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQVSDIFDPTLWDEVSGFQFDDITYHRAKAHGTVRIAINRPECRNAFRPKTVDELFIA CCCCHHHHCCCHHHHHCCCCEECCCEEEEECCCCEEEEEEECCHHHCCCCCCHHHHHHHH LDHARQWSDVGCVLLTGNGPSAKDGGWAFCSGGDQRIRGKDGYKYEGAEEGKADQARMGR HHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHCC LHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLASKEHAIFKQTDPDVASFDS CHHHHHHHHHHHHHHHEEEECCCCEECCCCEEEEEEEEEECCCCCEEEECCCCCHHHCCC GYGSAYLAKMIGQKRAREIFFCGFNYSADEAFDMGMVNKSVPHAELETEALMWAKEINSK CCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC SPTAMRMLKYGFNMTDDGMVGQQLFAGEATRLAYASAEAQEGRDAFLEKRDQDFSAFPWH CHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHEEECCCHHHCCHHHHHHHCCCCCCCCCCC Y C >Mature Secondary Structure TQQVSDIFDPTLWDEVSGFQFDDITYHRAKAHGTVRIAINRPECRNAFRPKTVDELFIA CCCHHHHCCCHHHHHCCCCEECCCEEEEECCCCEEEEEEECCHHHCCCCCCHHHHHHHH LDHARQWSDVGCVLLTGNGPSAKDGGWAFCSGGDQRIRGKDGYKYEGAEEGKADQARMGR HHHHCCCCCCCEEEEECCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHCC LHILEVQRLIRFMPKVVIAVVPGWAVGGGHSLHVVCDLTLASKEHAIFKQTDPDVASFDS CHHHHHHHHHHHHHHHEEEECCCCEECCCCEEEEEEEEEECCCCCEEEECCCCCHHHCCC GYGSAYLAKMIGQKRAREIFFCGFNYSADEAFDMGMVNKSVPHAELETEALMWAKEINSK CCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC SPTAMRMLKYGFNMTDDGMVGQQLFAGEATRLAYASAEAQEGRDAFLEKRDQDFSAFPWH CHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHEEECCCHHHCCHHHHHHHCCCCCCCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]