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The map label for this gene is glcB [H]

Identifier: 160877536

GI number: 160877536

Start: 5243192

End: 5243755

Strand: Direct

Name: glcB [H]

Synonym: Sbal195_4435

Alternate gene names: 160877536

Gene position: 5243192-5243755 (Clockwise)

Preceding gene: 160877533

Following gene: 160877537

Centisome position: 98.05

GC content: 47.7

Gene sequence:

>564_bases
ATGAATATGTCAATTATCAAGAGCAACCAGATCCAACCGAATCTAAACAGCCTCATCGCAGAAGAAGTGCTAGCCGTGGC
CCAAGTCAATGTCACCGAGCACGAGAAGATCGCTAATGCGAAACAATTCCTCGACCGCCTCTTTCCACTTAACTCTGGTT
CACACCAAGATGTGAGCAGCTATGTGGTTTACTACCAACACCTGTTGGCCTTTTTTGCCGACGGCAGCCACAGTGGTTTA
CGTCAGCCAAAACAGTTTGTGGCCTTTAACGGCACTAAAGATGCGCCTTGCGCCATAGTGTTGCAGGACCTAGGTTGCCA
CGTTGAACTCAGTTTCGACCGCAATGGCATGATAGGGGCGAGAGACGTTGCCAATCTGGAAGATATCCAAATCGAAACGT
CATTAAACATGATAGTCGGAACACCAGAGTCACGTTCAGCCGCATCGCGCCATTGGCTCAGCCTATTACATGCGGGTATG
TCTAGCGCTAACGACACCCAAGATAAGTTGTTTACCGCAAAGGATGGCAGCGATTACAACTTGAAAAGTATCGTAAATTT
ATAA

Upstream 100 bases:

>100_bases
CTCAAAGCGGACAAACCAAATTGAAGACAAACTTTGATAAGCCAAAAGTTAAATCAAAACCCTGAATTTTTTTAAATTGA
AAGAGTGAGAGGAACAAGCG

Downstream 100 bases:

>100_bases
TTTCACGCTCTGTAACCTCGCCATTTATAATCCAGCTAAGAAGATGAACTGAGCACAGTTCATCTTCTTCGATTTAACTT
CCTGCTTTGCACAATCCTCT

Product: malate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNMSIIKSNQIQPNLNSLIAEEVLAVAQVNVTEHEKIANAKQFLDRLFPLNSGSHQDVSSYVVYYQHLLAFFADGSHSGL
RQPKQFVAFNGTKDAPCAIVLQDLGCHVELSFDRNGMIGARDVANLEDIQIETSLNMIVGTPESRSAASRHWLSLLHAGM
SSANDTQDKLFTAKDGSDYNLKSIVNL

Sequences:

>Translated_187_residues
MNMSIIKSNQIQPNLNSLIAEEVLAVAQVNVTEHEKIANAKQFLDRLFPLNSGSHQDVSSYVVYYQHLLAFFADGSHSGL
RQPKQFVAFNGTKDAPCAIVLQDLGCHVELSFDRNGMIGARDVANLEDIQIETSLNMIVGTPESRSAASRHWLSLLHAGM
SSANDTQDKLFTAKDGSDYNLKSIVNL
>Mature_187_residues
MNMSIIKSNQIQPNLNSLIAEEVLAVAQVNVTEHEKIANAKQFLDRLFPLNSGSHQDVSSYVVYYQHLLAFFADGSHSGL
RQPKQFVAFNGTKDAPCAIVLQDLGCHVELSFDRNGMIGARDVANLEDIQIETSLNMIVGTPESRSAASRHWLSLLHAGM
SSANDTQDKLFTAKDGSDYNLKSIVNL

Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]

COG id: COG2225

COG function: function code C; Malate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malate synthase family. GlcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789348, Length=163, Percent_Identity=33.1288343558282, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011076
- InterPro:   IPR001465
- InterPro:   IPR006253 [H]

Pfam domain/function: PF01274 Malate_synthase [H]

EC number: =2.3.3.9 [H]

Molecular weight: Translated: 20562; Mature: 20562

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSIIKSNQIQPNLNSLIAEEVLAVAQVNVTEHEKIANAKQFLDRLFPLNSGSHQDVSS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YVVYYQHLLAFFADGSHSGLRQPKQFVAFNGTKDAPCAIVLQDLGCHVELSFDRNGMIGA
HHHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCC
RDVANLEDIQIETSLNMIVGTPESRSAASRHWLSLLHAGMSSANDTQDKLFTAKDGSDYN
CCCCCCHHEEEEEECEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCC
LKSIVNL
HHHHHCC
>Mature Secondary Structure
MNMSIIKSNQIQPNLNSLIAEEVLAVAQVNVTEHEKIANAKQFLDRLFPLNSGSHQDVSS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
YVVYYQHLLAFFADGSHSGLRQPKQFVAFNGTKDAPCAIVLQDLGCHVELSFDRNGMIGA
HHHHHHHHHHHHCCCCCCCCCCCHHEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCCC
RDVANLEDIQIETSLNMIVGTPESRSAASRHWLSLLHAGMSSANDTQDKLFTAKDGSDYN
CCCCCCHHEEEEEECEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCCCC
LKSIVNL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA