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The map label for this gene is ydfF [H]

Identifier: 160877363

GI number: 160877363

Start: 5042581

End: 5043336

Strand: Reverse

Name: ydfF [H]

Synonym: Sbal195_4261

Alternate gene names: 160877363

Gene position: 5043336-5042581 (Counterclockwise)

Preceding gene: 160877366

Following gene: 160877362

Centisome position: 94.32

GC content: 49.47

Gene sequence:

>756_bases
ATGGTTATCGAACTGTCCCCGAATGAGATTACAAGCATGGAACCTAACATTGCCTTTATTGCCAACTTGATTGGTGACGC
AGCCCGCTCACGTATGTTGATTGCTCTTATGGGCGGACAGGCATTGACGGCGACAGAACTGGCTCTTGAAGCAGACATCA
CGCCACAGACTGCTAGCAGCCATTTAACTAAGTTGGTTGAAGGTGAACTATTGCTCGTGCGTAAGCAGGGGAGGCATAAG
TATTTTCAGCTGCAGAGCCGCCAAGTGGCCGAACTGTTGGAAAGTTTGCTCAACATGAGCGCAGCCATTACGAACTCTAA
GGTCATTCATGGACCTGCGGACCCTAGATTGAGACTGGCTCGTGTTTGTTATGACCATCTCGCGGGTGAATTGGGTGTTG
CACTTTACGACAGCTTAAGTCGGCAGGATTTGATCGTCCATGAAGGGGGCGAAACAAAAATCACCGCAGCAGGGATGACC
TTTTTTGCCAAACGTGGCGTAGAACACTCGTTGCTGGGTGCACCAGATGATGTATTCGATGTACCGAAAAGTCGTCAATC
TCGCCGTCCTTTATGTAAGTCATGCCTCGATTGGAGCGAGCGTCGCAGTCATCTTGCTGGTGTTCTAGGTCAATGGGTTC
TTAAGGATATTTTGGCTAAAGGCTGGGCAGAGAAAGCCCTCGACACCCGTGCCCTACAATTTTCAAGCCGAGGGTTGAAA
TCCTTTCGTGCTGACTATGGCATTGCGACAAAATAG

Upstream 100 bases:

>100_bases
GTATTCGATAAAACAGGTAATTTTCATAGTGCTTGGCGCCATTGACTTGTGTGCTAAAGGTTTTAGCTGCATTGTAATTA
CCTGAAAACTTAATGCTTCG

Downstream 100 bases:

>100_bases
ACAAGGTAAATTGGTCTATTTTACCAATGATATATAGCGTCTTGGCCTTGTTTAACAGCGCGCCGCCAGTCCGATGGTTT
GAAGAAATTTATCAATAAAA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MVIELSPNEITSMEPNIAFIANLIGDAARSRMLIALMGGQALTATELALEADITPQTASSHLTKLVEGELLLVRKQGRHK
YFQLQSRQVAELLESLLNMSAAITNSKVIHGPADPRLRLARVCYDHLAGELGVALYDSLSRQDLIVHEGGETKITAAGMT
FFAKRGVEHSLLGAPDDVFDVPKSRQSRRPLCKSCLDWSERRSHLAGVLGQWVLKDILAKGWAEKALDTRALQFSSRGLK
SFRADYGIATK

Sequences:

>Translated_251_residues
MVIELSPNEITSMEPNIAFIANLIGDAARSRMLIALMGGQALTATELALEADITPQTASSHLTKLVEGELLLVRKQGRHK
YFQLQSRQVAELLESLLNMSAAITNSKVIHGPADPRLRLARVCYDHLAGELGVALYDSLSRQDLIVHEGGETKITAAGMT
FFAKRGVEHSLLGAPDDVFDVPKSRQSRRPLCKSCLDWSERRSHLAGVLGQWVLKDILAKGWAEKALDTRALQFSSRGLK
SFRADYGIATK
>Mature_251_residues
MVIELSPNEITSMEPNIAFIANLIGDAARSRMLIALMGGQALTATELALEADITPQTASSHLTKLVEGELLLVRKQGRHK
YFQLQSRQVAELLESLLNMSAAITNSKVIHGPADPRLRLARVCYDHLAGELGVALYDSLSRQDLIVHEGGETKITAAGMT
FFAKRGVEHSLLGAPDDVFDVPKSRQSRRPLCKSCLDWSERRSHLAGVLGQWVLKDILAKGWAEKALDTRALQFSSRGLK
SFRADYGIATK

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 27548; Mature: 27548

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIELSPNEITSMEPNIAFIANLIGDAARSRMLIALMGGQALTATELALEADITPQTASS
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCCHHHH
HLTKLVEGELLLVRKQGRHKYFQLQSRQVAELLESLLNMSAAITNSKVIHGPADPRLRLA
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
RVCYDHLAGELGVALYDSLSRQDLIVHEGGETKITAAGMTFFAKRGVEHSLLGAPDDVFD
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHHCCCCHHHCCCCCHHHC
VPKSRQSRRPLCKSCLDWSERRSHLAGVLGQWVLKDILAKGWAEKALDTRALQFSSRGLK
CCCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFRADYGIATK
HHHHCCCCCCC
>Mature Secondary Structure
MVIELSPNEITSMEPNIAFIANLIGDAARSRMLIALMGGQALTATELALEADITPQTASS
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCCHHHH
HLTKLVEGELLLVRKQGRHKYFQLQSRQVAELLESLLNMSAAITNSKVIHGPADPRLRLA
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
RVCYDHLAGELGVALYDSLSRQDLIVHEGGETKITAAGMTFFAKRGVEHSLLGAPDDVFD
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHHCCCCHHHCCCCCHHHC
VPKSRQSRRPLCKSCLDWSERRSHLAGVLGQWVLKDILAKGWAEKALDTRALQFSSRGLK
CCCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFRADYGIATK
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]