| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877287
Identifier: 160877287
GI number: 160877287
Start: 4950963
End: 4951472
Strand: Reverse
Name: 160877287
Synonym: Sbal195_4184
Alternate gene names: NA
Gene position: 4951472-4950963 (Counterclockwise)
Preceding gene: 160877288
Following gene: 160877286
Centisome position: 92.6
GC content: 47.84
Gene sequence:
>510_bases ATGCAAAACCGTGCACATTCAGAGGCGCCAGAGCAAAGACCAGTCCAGCATGCTGAACTCACTGGGCAGCATGCATCCGC TGCCCACAATAAGGTGGTTGATCAGGCCATTGAGCAATTGGCTGAAATAGCGGCACTGAGCAGCTCGGTGAAGCAAGCCT ATATCAATCAGTTAAATTTGGCAGGAAAAATAGCAACGGCAGAATGGCAGTTAACGGGTCGCAGCTTGATTATTGCTGCG GCTTTGGTTGTCTGTTTTGGGACGGGTATTACCCTATTCTGGGGCAGTATTTTATTGCTGCTGGGCTATATGCTGTTTCA ATTGAGCGGCTCGTTATTGATTACCGCGAGCGCGTTAGTGGTATTGCAGTTTGTGTTATTGATCTGGTGTTGGCGTAGCC TGAGCTATGTACTGTCGCAAGCGGGTTTTTCAAAGACTTGGCAGCAGTTACGGTTGTTGTTTTCTACTCAACACTCAGCC AACAAACAACAGGAAGATCAACAATGCTAG
Upstream 100 bases:
>100_bases CCGTGAGCTGGCAGCGCAAAATCCGCTGGCCACCGCCGGGATAGCGTTTGCAGCTGGTGTAGTGTTGACTGCCTTGTTAC GCCGTCGTTAGGGTGGGTTT
Downstream 100 bases:
>100_bases TACAAAAGTTACTTAAAAAGCAGCAATTAGAGCTCACTGTACTGACGGAGCAAGGTCGGCTGCAGCATGAGTTATTGCAG GTGAGGAAACAACAACTAGC
Product: putative orphan protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNLAGKIATAEWQLTGRSLIIAA ALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALVVLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSA NKQQEDQQC
Sequences:
>Translated_169_residues MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNLAGKIATAEWQLTGRSLIIAA ALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALVVLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSA NKQQEDQQC >Mature_169_residues MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNLAGKIATAEWQLTGRSLIIAA ALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALVVLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSA NKQQEDQQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18608; Mature: 18608
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNL CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKIATAEWQLTGRSLIIAAALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALV HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSANKQQEDQQC HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQNRAHSEAPEQRPVQHAELTGQHASAAHNKVVDQAIEQLAEIAALSSSVKQAYINQLNL CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKIATAEWQLTGRSLIIAAALVVCFGTGITLFWGSILLLLGYMLFQLSGSLLITASALV HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VLQFVLLIWCWRSLSYVLSQAGFSKTWQQLRLLFSTQHSANKQQEDQQC HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA