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The map label for this gene is ydiU [C]

Identifier: 160877259

GI number: 160877259

Start: 4920887

End: 4922341

Strand: Reverse

Name: ydiU [C]

Synonym: Sbal195_4156

Alternate gene names: 160877259

Gene position: 4922341-4920887 (Counterclockwise)

Preceding gene: 160877260

Following gene: 160877258

Centisome position: 92.05

GC content: 50.52

Gene sequence:

>1455_bases
ATGAAGTTTAAACAGGATTTTTTTACACAGTTACCTGAGTTTTACTCGCAAGTGTACCCGCAAGGGATAACTAAGCCCGA
GTGGCTAGCATGGAGTGATGACGCTGCGCAATTGATTGGCTTGAGCCAACCCACAGATGAGCTGTTACTGGGCTTGTCTG
GCAATACCGCCGTCGATGGCGCGACTTACTATGCTCAAGTCTATAGCGGCCACCAATTTGGCGGTTATACGCCGCGCTTA
GGGGATGGACGCTCGATTATTTTAGGTGAAGCGATTGGCCCAAATGGCGTATGGGATGTCGCCCTAAAGGGCGGTGGTCC
GACGCCTTATTCGCGCCGTGGTGATGGCCGCGCTGTGATGCGCTCTGCCGTGCGTGAGTTTTTAGTCTCTGAGGCGTTGC
ATCATTTACATGTGCCGACGACCCGTGCCTTGGCCGTGATTGGCTCTGACCTACCCGTATGGCGCGAGAGCCAAGAAACC
GCAGCCATTACCGTGCGTTTAGCCCGTAGCCATATTCGTTTCGGTCATTTCGAGTTTTTCTGCCACAGTGAGCGCGGCCG
CGCCGATAAACTGATCCAATTACTCAACTTCACTATTACTCAGCATTATCCCCATTTGAGTTGTGATGCCGCAGGCTATA
AAGCGTGGTTTTTACAGGTAGTGCAAGATACCGCCAAGATGATTGCCCACTGGCAGGCGGTCGGTTTTGCCCATGGCGTG
ATGAATACAGACAATATGTCGATTCTGGGTGACAGTTTTGACTTCGGTCCCTTTGCGTTCCTCGATACATTCCAAGAGGA
TTTTATCTGTAATCATTCGGATCCCGAAGGTCGTTATGCCTTTGGACAGCAGCCGGGCGTTGGTTTGTGGAACTTGCAAC
GCTTAGCGCAGGCGCTCACACCTGTGATCCCATCCGATGACTTAATTGCCATTCTTAATCAATACCAAGAGGCGCTAGTG
CAGCCTTATTTGCGCTTGATGCGGGCGAAATTAGGTCTCTCTGCAGTTGATGTCCCGTCGGTAGAGCAGGACAAACAGGA
TCTCGACCTCATAGGTCGATTCACTGTGCTGATGGAGAAAAATCAGCTTGATTACACTCAGACTTGGCGCCAATTAGGCA
AGTTAGATCCGACCAGCAAACACAGTGCGCTGCGGGATGACTTTATCGATGTCAGTCAGTTTGATACTTGGTATCAAGCC
TACCAATTGCGATTGGGCGCAGTAGCGGATATCCCAGCGTGGCAAACTGAGCGCAATAGTGTGAATCCCAAATATATTTT
GCGTAACTATTTAGCCCAAGAGGCGATAATCGCAGTAGAAGAGGGTAATCTTGCGCCGCTGCATTTGCTGCAAAAAATCT
TAACTCAGCCCTTTGCCGAACACGCAGATCATGAAGACTTGGCCAAGCGTCCACCGGACTGGGGCCAAGGTTTGATCATG
TCATGTAGTAGTTGA

Upstream 100 bases:

>100_bases
AAGTGGCTTTGGCCTTGGGGTGTATCAATGTGGGCACCTATGTGAGTTCGACGATAAGTCGGTGCTGGTTTGCAAGACCA
TGAGCCAATAGGTGGACAAG

Downstream 100 bases:

>100_bases
TTGGATAACAAGCATGAAATTACCAAGCACGCATTTAAAAGCTATTAGCTTAGATACCATTAGCTTAGATAGAAGCGCCT
TAAGTTTAGCGGTCAGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNTAVDGATYYAQVYSGHQFGGYTPRL
GDGRSIILGEAIGPNGVWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQET
AAITVRLARSHIRFGHFEFFCHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGVGLWNLQRLAQALTPVIPSDDLIAILNQYQEALV
QPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEKNQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQA
YQLRLGAVADIPAWQTERNSVNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHADHEDLAKRPPDWGQGLIM
SCSS

Sequences:

>Translated_484_residues
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNTAVDGATYYAQVYSGHQFGGYTPRL
GDGRSIILGEAIGPNGVWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQET
AAITVRLARSHIRFGHFEFFCHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGVGLWNLQRLAQALTPVIPSDDLIAILNQYQEALV
QPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEKNQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQA
YQLRLGAVADIPAWQTERNSVNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHADHEDLAKRPPDWGQGLIM
SCSS
>Mature_484_residues
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNTAVDGATYYAQVYSGHQFGGYTPRL
GDGRSIILGEAIGPNGVWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQET
AAITVRLARSHIRFGHFEFFCHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGVGLWNLQRLAQALTPVIPSDDLIAILNQYQEALV
QPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEKNQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQA
YQLRLGAVADIPAWQTERNSVNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHADHEDLAKRPPDWGQGLIM
SCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=42.0365535248042, Blast_Score=275, Evalue=5e-74,
Organism=Escherichia coli, GI1787999, Length=488, Percent_Identity=45.9016393442623, Blast_Score=412, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6325034, Length=327, Percent_Identity=36.697247706422, Blast_Score=186, Evalue=9e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54283; Mature: 54283

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNTAVDG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCHHHHEEECCCCCCCCC
ATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGVWDVALKGGGPTPYSRRGDGRAVM
HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHH
RSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQETAAITVRLARSHIRFGHFEFF
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHEEHEEHHHHHCCCCEEEE
CHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGVGLWNLQRLAQALT
CCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
PVIPSDDLIAILNQYQEALVQPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEC
NQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQAYQLRLGAVADIPAWQTERNS
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCC
VNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHADHEDLAKRPPDWGQGLIM
CCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEE
SCSS
ECCC
>Mature Secondary Structure
MKFKQDFFTQLPEFYSQVYPQGITKPEWLAWSDDAAQLIGLSQPTDELLLGLSGNTAVDG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCCHHHHEEECCCCCCCCC
ATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGVWDVALKGGGPTPYSRRGDGRAVM
HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHH
RSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRESQETAAITVRLARSHIRFGHFEFF
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHEEHEEHHHHHCCCCEEEE
CHSERGRADKLIQLLNFTITQHYPHLSCDAAGYKAWFLQVVQDTAKMIAHWQAVGFAHGV
EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MNTDNMSILGDSFDFGPFAFLDTFQEDFICNHSDPEGRYAFGQQPGVGLWNLQRLAQALT
CCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHC
PVIPSDDLIAILNQYQEALVQPYLRLMRAKLGLSAVDVPSVEQDKQDLDLIGRFTVLMEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEC
NQLDYTQTWRQLGKLDPTSKHSALRDDFIDVSQFDTWYQAYQLRLGAVADIPAWQTERNS
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCCCCCC
VNPKYILRNYLAQEAIIAVEEGNLAPLHLLQKILTQPFAEHADHEDLAKRPPDWGQGLIM
CCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEE
SCSS
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA