| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877221
Identifier: 160877221
GI number: 160877221
Start: 4875618
End: 4876481
Strand: Reverse
Name: 160877221
Synonym: Sbal195_4117
Alternate gene names: NA
Gene position: 4876481-4875618 (Counterclockwise)
Preceding gene: 160877222
Following gene: 160877218
Centisome position: 91.2
GC content: 47.57
Gene sequence:
>864_bases ATGAAAAAGTTATTAATTATGTTTGCGATGATTTTTGCGGTTAGCTTGGTTGCTAGTCCAGTCGCAGAAGCGAAAAAGTT CGGCGGTAGTAAATCTATTGGCAAGAGTCACCAAACGGCTCCGGCTCAACCAGCGGCGACCAACACACCGACTACAGCAC CAGCGGGAGCGCCGGGCAAGAAAGGTATGATGGGCGGCATGTTAGGCGGTTTATTAGCGGGTGGCTTATTGGCTGCGCTG TTTATGGGCGGTGGTTTTGAAAATATTCAAATTATGGATATTTTGATAATCGGTTTGCTGGCATTCGTACTATTCAAAAT TGTCCGTACTGTGATGGCCTCAAAAGCGGGGGCACAACAAAGACCAGCCTACGCGGGAGCTGGCCAACCCAATCCGAATA TGCAGCGCCAACAGACTGAACAAACAGGTTTTGCCACCAATACAAACAGCGGCAGCAATGGTTTTGGCCAAGCGACAAGC GCAGTTCCTTTTGATTTGCCAGCAGGTTTTGATTTACCAAGCTTTTTGGAAGGCGCTCGTAGTCACTACAAAACCTTGCA ATTGGCGTGGAATGAAAACGACTTAAGCAAAATCCAAGAGTATGTTTCGATTGAGCTTTACAATGAACTCAGCAACCAAC GCCGCGAGTTAGTTGGCGATCAGCACACTGAAGTGATGTTTTTGGATGCCGAACTCGTCCGCGCCACACACAATGCAAAT CTTGCGGAAGTGAGCGTTAAATTTAGCGGCCGCTATCGCGATACCGTTGAAGGCGTAGAAGAGGACATTAAGGAAATCTG GCATTTAGAGCGTAACGTAACGCAAGCCAATTCACCTTGGTTGATCGTTGGTGTCGAACAGTAA
Upstream 100 bases:
>100_bases AAAAGAATGAAAAACCAGCCTCCGCTTTTTCATAGTTGACATATAATGTCATCTCGCTATGATGCCGATACCACAGGTTA TACAAACAAAGATCTTATAA
Downstream 100 bases:
>100_bases TCTGCCCGTCTTCAAAAGCAGCCTTAATCTCTTAAGGCTGCTATTTATATCCCCTTTCGTTCAAATCCAGCCTCCCTTCA GTAGTTCAACGTTATTGATA
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Tim44 Domain Protein; Hypothtical Protein; Transmembrane Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Contain Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKKLLIMFAMIFAVSLVASPVAEAKKFGGSKSIGKSHQTAPAQPAATNTPTTAPAGAPGKKGMMGGMLGGLLAGGLLAAL FMGGGFENIQIMDILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQRQQTEQTGFATNTNSGSNGFGQATS AVPFDLPAGFDLPSFLEGARSHYKTLQLAWNENDLSKIQEYVSIELYNELSNQRRELVGDQHTEVMFLDAELVRATHNAN LAEVSVKFSGRYRDTVEGVEEDIKEIWHLERNVTQANSPWLIVGVEQ
Sequences:
>Translated_287_residues MKKLLIMFAMIFAVSLVASPVAEAKKFGGSKSIGKSHQTAPAQPAATNTPTTAPAGAPGKKGMMGGMLGGLLAGGLLAAL FMGGGFENIQIMDILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQRQQTEQTGFATNTNSGSNGFGQATS AVPFDLPAGFDLPSFLEGARSHYKTLQLAWNENDLSKIQEYVSIELYNELSNQRRELVGDQHTEVMFLDAELVRATHNAN LAEVSVKFSGRYRDTVEGVEEDIKEIWHLERNVTQANSPWLIVGVEQ >Mature_287_residues MKKLLIMFAMIFAVSLVASPVAEAKKFGGSKSIGKSHQTAPAQPAATNTPTTAPAGAPGKKGMMGGMLGGLLAGGLLAAL FMGGGFENIQIMDILIIGLLAFVLFKIVRTVMASKAGAQQRPAYAGAGQPNPNMQRQQTEQTGFATNTNSGSNGFGQATS AVPFDLPAGFDLPSFLEGARSHYKTLQLAWNENDLSKIQEYVSIELYNELSNQRRELVGDQHTEVMFLDAELVRATHNAN LAEVSVKFSGRYRDTVEGVEEDIKEIWHLERNVTQANSPWLIVGVEQ
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30858; Mature: 30858
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLIMFAMIFAVSLVASPVAEAKKFGGSKSIGKSHQTAPAQPAATNTPTTAPAGAPGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGMMGGMLGGLLAGGLLAALFMGGGFENIQIMDILIIGLLAFVLFKIVRTVMASKAGAQQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RPAYAGAGQPNPNMQRQQTEQTGFATNTNSGSNGFGQATSAVPFDLPAGFDLPSFLEGAR CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SHYKTLQLAWNENDLSKIQEYVSIELYNELSNQRRELVGDQHTEVMFLDAELVRATHNAN HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCC LAEVSVKFSGRYRDTVEGVEEDIKEIWHLERNVTQANSPWLIVGVEQ EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MKKLLIMFAMIFAVSLVASPVAEAKKFGGSKSIGKSHQTAPAQPAATNTPTTAPAGAPGK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGMMGGMLGGLLAGGLLAALFMGGGFENIQIMDILIIGLLAFVLFKIVRTVMASKAGAQQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RPAYAGAGQPNPNMQRQQTEQTGFATNTNSGSNGFGQATSAVPFDLPAGFDLPSFLEGAR CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SHYKTLQLAWNENDLSKIQEYVSIELYNELSNQRRELVGDQHTEVMFLDAELVRATHNAN HHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCC LAEVSVKFSGRYRDTVEGVEEDIKEIWHLERNVTQANSPWLIVGVEQ EEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA